; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G004650 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G004650
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUbiquitin domain-containing protein
Genome locationCmo_Chr16:2228534..2232356
RNA-Seq ExpressionCmoCh16G004650
SyntenyCmoCh16G004650
Gene Ontology termsNA
InterPro domainsIPR032752 - DC-UbP/UBTD2, N-terminal domain
IPR038169 - DC-UbP/UBTD2, N-terminal domain superfamily
IPR039869 - Ubiquitin domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137230.1 ubiquitin domain-containing protein 1 [Cucumis sativus]2.4e-5694.78Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQT  DGSIKKIRKPKSWKHPQPITRSQL QLR+EFWDTAPHYGGRKEIWDALRAAAEAELSLAQAI+DSAGVI+QNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

XP_022931411.1 ubiquitin domain-containing protein 2-like [Cucurbita moschata]8.8e-59100Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

XP_022984742.1 ubiquitin domain-containing protein 2-like [Cucurbita maxima]3.7e-5797.39Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQTNG+GSIKKIRKPKSWKHPQPITR QLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERG KYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

XP_023552879.1 ubiquitin domain-containing protein 2-like [Cucurbita pepo subsp. pepo]5.7e-5899.13Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQTNGDGSIKKI KPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

XP_038882682.1 ubiquitin domain-containing protein 2-like [Benincasa hispida]5.7e-5897.39Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQL+QLR+EFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVI+QNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

TrEMBL top hitse value%identityAlignment
A0A0A0KVJ9 UBD domain-containing protein1.2e-5694.78Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQT  DGSIKKIRKPKSWKHPQPITRSQL QLR+EFWDTAPHYGGRKEIWDALRAAAEAELSLAQAI+DSAGVI+QNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

A0A6J1ETK8 ubiquitin domain-containing protein 2-like4.2e-59100Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

A0A6J1FQA3 ubiquitin domain-containing protein 1-like3.7e-5592.17Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGC GSSQTNGDGS KKIRKPK WKHPQPITRSQL QLR+EFWDTAPHYGGR EIWDALRAAAEAELSLAQAIIDSAGVI+QNADLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
         YVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

A0A6J1J306 ubiquitin domain-containing protein 2-like1.8e-5797.39Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGSSQTNG+GSIKKIRKPKSWKHPQPITR QLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERG KYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
        NYVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

A0A6J1J725 ubiquitin domain-containing protein 1-like isoform X23.7e-5592.17Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGC GSSQTNGDGS KKIRKPK WKHPQPITRSQL QLR+EFWDTAPHYGGR EIWDALRAAAEAELSLAQAIIDSAGVI+QNADLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
         YVLSEPTNLIRDSS
Subjt:  NYVLSEPTNLIRDSS

SwissProt top hitse value%identityAlignment
Q4V8W7 Ubiquitin domain-containing protein 11.8e-2247.73Show/hide
Query:  GCAG--SSQTNGDGS------------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIIQN
        GC G   ++T G GS            +KK  KPK WK   P+T  QL   R+EFWDTAP + GRKEIWDAL+AAA A    +  LAQAI+D A + + +
Subjt:  GCAG--SSQTNGDGS------------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIIQN

Query:  ADLTICYDERGAKYELPNYVLSEPTNLIRDSS
          LT CYDE G +Y+LP Y L+ P NLI + S
Subjt:  ADLTICYDERGAKYELPNYVLSEPTNLIRDSS

Q5EAE3 Ubiquitin domain-containing protein 23.1e-2249.57Show/hide
Query:  GSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        G+    G     K  KPK WK   P+T  QL   R+EFWDTAP + GRKEIWDAL+AAA A    +  LAQAIID A + + +  LT CYDE G +Y+LP
Subjt:  GSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNLIRDSS
         Y L+ P N+I + S
Subjt:  NYVLSEPTNLIRDSS

Q640W6 Ubiquitin domain-containing protein 12.3e-2248.8Show/hide
Query:  AGSSQTNGDGS---------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICY
        +GS   N DG+         +KK  KPK WK   P+T  QL   R+EFWDTAP + GRKEIWDAL+AAA A    +  LAQAIID A + + +  LT CY
Subjt:  AGSSQTNGDGS---------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICY

Query:  DERGAKYELPNYVLSEPTNLIRDSS
        DE G +Y+LP Y L+ P N+I + S
Subjt:  DERGAKYELPNYVLSEPTNLIRDSS

Q6DG43 Ubiquitin domain-containing protein 23.6e-2349.19Show/hide
Query:  AGSSQTNGDGS--------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYD
        +GS   N DG+          K  KPK WK   P+T  QL   R+EFWDTAP + GRKEIWDAL+AAA+A    +  LAQAIID A + + +  LT CYD
Subjt:  AGSSQTNGDGS--------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICYD

Query:  ERGAKYELPNYVLSEPTNLIRDSS
        E G +Y+LP Y LS P N+I + S
Subjt:  ERGAKYELPNYVLSEPTNLIRDSS

Q6PGH0 Ubiquitin domain-containing protein 21.4e-2248.8Show/hide
Query:  AGSSQTNGDGS---------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICY
        +GS   N DG+         +KK  KPK WK   P+T  QL   R+EFWDTAP + GRKEIWDAL+AAA A    +  LAQAIID A + + +  LT CY
Subjt:  AGSSQTNGDGS---------IKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEA----ELSLAQAIIDSAGVIIQNADLTICY

Query:  DERGAKYELPNYVLSEPTNLIRDSS
        DE G +Y+LP Y L+ P N+I + S
Subjt:  DERGAKYELPNYVLSEPTNLIRDSS

Arabidopsis top hitse value%identityAlignment
AT1G16960.1 Ubiquitin domain-containing protein6.5e-4472.32Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEA-ELSLAQAIIDSAGVIIQNADLTICYDERGAKYEL
        MGC+ SS+T  +G  +KIR+PK+WKHPQPI+R +L Q+REEFWDTAPHYGG+KEIWDALRAAAE  +LSLAQ I++SAGVI+QN DLTICYDE+G+KYEL
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEA-ELSLAQAIIDSAGVIIQNADLTICYDERGAKYEL

Query:  PNYVLSEPTNLI
        P YVL +P+NLI
Subjt:  PNYVLSEPTNLI

AT1G53400.1 Ubiquitin domain-containing protein2.9e-5282.73Show/hide
Query:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP
        MGCAGS+Q+  DGS+KKIRKPK WKH QPIT+++L++LREEFWDTAPHYGGRKEIWDALRAAAEA++SLAQAI+DSAGVI+QN DLT+CYDERGAKYELP
Subjt:  MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELP

Query:  NYVLSEPTNL
         YVLSEPTNL
Subjt:  NYVLSEPTNL

AT5G45740.1 Ubiquitin domain-containing protein2.0e-4571.3Show/hide
Query:  MGCAGSSQTNGDGSI--KKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYE
        MGC GSSQ   +G    KKI KPK W H +PITR+QL  +REEFWDT+PHYGG++EIW+ALRAAAEA+L LAQ I+DSAGVI+QN DLT+C+DERGA+YE
Subjt:  MGCAGSSQTNGDGSI--KKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYE

Query:  LPNYVLSEPTNLIRD
        LP YVLSEPTNLIR+
Subjt:  LPNYVLSEPTNLIRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTGTGCTGGATCGTCGCAGACCAACGGGGACGGTTCCATAAAGAAAATACGCAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTTGTGCA
ACTGCGGGAGGAGTTCTGGGACACTGCACCTCACTATGGTGGCCGAAAAGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCCCTTGCGCAAGCCATCA
TAGACAGTGCAGGGGTAATCATCCAAAATGCAGATTTGACAATCTGTTACGACGAGAGAGGCGCAAAATATGAACTACCCAACTATGTTTTGAGTGAGCCAACCAATTTG
ATTCGTGACAGTTCATAA
mRNA sequenceShow/hide mRNA sequence
GTGTTTATGTAATACTCCCTGAAAGTTTATATTCTCTCAGGCCTCATCTATCCTTCTATCTGCCTGTGAATTGGAGCTTCTGTTCTAGCGAGACGCAATGGGCTGTGCTG
GATCGTCGCAGACCAACGGGGACGGTTCCATAAAGAAAATACGCAAGCCAAAATCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTTGTGCAACTGCGGGAGGAG
TTCTGGGACACTGCACCTCACTATGGTGGCCGAAAAGAGATTTGGGACGCACTACGAGCAGCTGCCGAAGCCGAGCTTTCCCTTGCGCAAGCCATCATAGACAGTGCAGG
GGTAATCATCCAAAATGCAGATTTGACAATCTGTTACGACGAGAGAGGCGCAAAATATGAACTACCCAACTATGTTTTGAGTGAGCCAACCAATTTGATTCGTGACAGTT
CATAAAGAGGTAACCATAACTTCATTTCTGCTCTAGCTGAAATCACACAGGTATGAATAATGCTTGCTTTTGAAAGGTTTCATTTTGGTCCTTAATACAAACATACATTA
TTCATTCCTCTAACTTCTCCTGTAAGTTGCTTTACTCTAAATGGACAAATTGCAACATCCCTTTTC
Protein sequenceShow/hide protein sequence
MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALRAAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNL
IRDSS