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CmoCh16G004680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G004680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:2237705..2238642
RNA-Seq ExpressionCmoCh16G004680
SyntenyCmoCh16G004680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577032.1 hypothetical protein SDJN03_24606, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4492.73Show/hide
Query:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
        MPTSAD  SSSSSSS SSSSS+ DCATPKSLSVQLVSK ASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSK ENAKKAWRKL
Subjt:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL

Query:  ITCFGGLLCS
        ITCF GLLCS
Subjt:  ITCFGGLLCS

KAG7015053.1 hypothetical protein SDJN02_22686, partial [Cucurbita argyrosperma subsp. argyrosperma]7.4e-47100Show/hide
Query:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
        MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
Subjt:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL

Query:  ITCFG
        ITCFG
Subjt:  ITCFG

XP_022931413.1 uncharacterized protein LOC111437603 [Cucurbita moschata]5.5e-50100Show/hide
Query:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
        MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
Subjt:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL

Query:  ITCFGGLLCS
        ITCFGGLLCS
Subjt:  ITCFGGLLCS

XP_023552146.1 uncharacterized protein LOC111809909 isoform X1 [Cucurbita pepo subsp. pepo]7.6e-4495.33Show/hide
Query:  MPTSAD--SSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWR
        MPTSAD  SSSSSSSSSSSSSSSFLDCATP+SLSVQLVSK ASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKLENAKKAWR
Subjt:  MPTSAD--SSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWR

Query:  KLITCFG
        KLITCFG
Subjt:  KLITCFG

XP_023552147.1 protein DSE2-like isoform X2 [Cucurbita pepo subsp. pepo]8.1e-4693.75Show/hide
Query:  MPTSAD--SSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWR
        MPTSAD  SSSSSSSSSSSSSSSFLDCATP+SLSVQLVSK ASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKLENAKKAWR
Subjt:  MPTSAD--SSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWR

Query:  KLITCFGGLLCS
        KLITCFGG  CS
Subjt:  KLITCFGGLLCS

TrEMBL top hitse value%identityAlignment
A0A6J1CMP9 uncharacterized protein LOC1110128782.2e-3680.39Show/hide
Query:  SSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKLITCFGGLL
        S++SSSSSSSSSSFL+C +P S SVQLVSK  SDRLLGKFFDAS+FDFDYEQSSLWSPPIPRRVFLDSPA+VCSGYEV SKL++AKKAWRK + CF G  
Subjt:  SSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKLITCFGGLL

Query:  CS
        CS
Subjt:  CS

A0A6J1EYJ9 uncharacterized protein LOC1114376032.6e-50100Show/hide
Query:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
        MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
Subjt:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL

Query:  ITCFGGLLCS
        ITCFGGLLCS
Subjt:  ITCFGGLLCS

A0A6J1J4Z5 uncharacterized protein LOC111482673 isoform X25.0e-4188.68Show/hide
Query:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
        MPTSAD     SSSSSSSSSSFLDCATP+SLSVQLVSK ASDRLL KFFDASKF+FDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKLEN KKAWRK 
Subjt:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL

Query:  ITCFGG
        ITCFGG
Subjt:  ITCFGG

A0A6J1J7J0 uncharacterized protein LOC1114820712.7e-3478Show/hide
Query:  SSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKLITCFGGLLCS
        S+ SS+ SSS F++CATP   SVQLVSK  SDRLLGKFFDAS+FDFDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKLE AK AWRK + CF G  CS
Subjt:  SSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKLITCFGGLLCS

A0A6J1J8D3 uncharacterized protein LOC111482673 isoform X13.2e-4088.57Show/hide
Query:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL
        MPTSAD     SSSSSSSSSSFLDCATP+SLSVQLVSK ASDRLL KFFDASKF+FDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKLEN KKAWRK 
Subjt:  MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKL

Query:  ITCFG
        ITCFG
Subjt:  ITCFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15140.1 unknown protein6.7e-0639.19Show/hide
Query:  VQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVF----LDSPADVCSGYEVLSKLENAKKAWRKLIT
        V+ +  +    LL KF D S F FDY QSSLWSP +PR       LDS + VC   + L + +  KK   K+++
Subjt:  VQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVF----LDSPADVCSGYEVLSKLENAKKAWRKLIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCTCTGCCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTCTTGATTGCGCTACTCCGAAGAGTCTGAGCGTTCAACTCGTGTC
TAAATTGGCGTCGGATCGCCTTCTCGGCAAGTTCTTCGATGCCTCGAAATTCGACTTCGATTACGAACAGAGTAGTTTGTGGTCTCCGCCGATTCCGCGGCGAGTGTTTC
TGGATTCGCCGGCTGATGTTTGCTCTGGTTATGAGGTTCTCTCGAAGCTTGAGAATGCGAAGAAGGCATGGAGGAAACTTATAACTTGTTTCGGAGGATTGTTGTGTTCT
TAG
mRNA sequenceShow/hide mRNA sequence
CAATCAATCTAAACGCGCTCCACGATACCTTCGTACGCTGCAACACTTCTTCTTCTTCGTCGAGAAGTTTCTCTTCTCCATCATCTCTCCGATGCCAACCTCTGCCGATT
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTCTTGATTGCGCTACTCCGAAGAGTCTGAGCGTTCAACTCGTGTCTAAATTGGCGTCGGATCGC
CTTCTCGGCAAGTTCTTCGATGCCTCGAAATTCGACTTCGATTACGAACAGAGTAGTTTGTGGTCTCCGCCGATTCCGCGGCGAGTGTTTCTGGATTCGCCGGCTGATGT
TTGCTCTGGTTATGAGGTTCTCTCGAAGCTTGAGAATGCGAAGAAGGCATGGAGGAAACTTATAACTTGTTTCGGAGGATTGTTGTGTTCTTAGAATCATTGATTCCACC
TTACAACTTTTGAGCAATTCTCTCCCATTATGATCCGCG
Protein sequenceShow/hide protein sequence
MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKLITCFGGLLCS