CuGenDBv2

Gene ID	CmoCh16G004690
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	RAB GTPase homolog A1B
Genome location	Cmo_Chr16:2239375..2241916
RNA-Seq Expression	CmoCh16G004690
Synteny	CmoCh16G004690
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0042538 - hyperosmotic salinity response (biological process) GO:0060627 - regulation of vesicle-mediated transport (biological process) GO:0012505 - endomembrane system (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR001806 - Small GTPase IPR005225 - Small GTP-binding protein domain IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022142868.1 ras-related protein Rab11D-like [Momordica charantia]

3.2e-111

98.59

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSA+SVPAQGEK
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDESGLTRIK
        INIKDESGL RIK
Subjt:  INIKDESGLTRIK

XP_022931489.1 ras-related protein Rab11D-like [Cucurbita moschata]

1.7e-112

100

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDESGLTRIK
        INIKDESGLTRIK
Subjt:  INIKDESGLTRIK

XP_022982677.1 ras-related protein RABA1b-like [Cucurbita maxima]

9.3e-111

98.12

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSA+SVPAQGEK
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDESGLTRIK
        INIKDESGL RIK
Subjt:  INIKDESGLTRIK

XP_022984337.1 ras-related protein RABA1b-like [Cucurbita maxima]

9.3e-111

98.59

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSA SVPAQGEK
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDESGLTRIK
        INIKDESGL RIK
Subjt:  INIKDESGLTRIK

XP_023552145.1 ras-related protein Rab11D-like [Cucurbita pepo subsp. pepo]

1.9e-111

99.06

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSA SVPAQGEK
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDESGLTRIK
        INIKDESGL RIK
Subjt:  INIKDESGLTRIK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXK6 Uncharacterized protein

1.0e-110

97.65

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSA++VPAQGEK
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDESGLTRIK
        INIKDESGL RIK
Subjt:  INIKDESGLTRIK

A0A6J1CPC3 ras-related protein Rab11D-like

1.5e-111

98.59

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSA+SVPAQGEK
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDESGLTRIK
        INIKDESGL RIK
Subjt:  INIKDESGLTRIK

A0A6J1EUD9 ras-related protein Rab11D-like

8.2e-113

100

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDESGLTRIK
        INIKDESGLTRIK
Subjt:  INIKDESGLTRIK

A0A6J1IX83 ras-related protein RABA1b-like

4.5e-111

98.12

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAE+ESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSA+SVPAQGEK
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDESGLTRIK
        INIKDESGL RIK
Subjt:  INIKDESGLTRIK

A0A6J1J1X3 ras-related protein RABA1b-like

4.5e-111

98.59

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSA SVPAQGEK
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDESGLTRIK
        INIKDESGL RIK
Subjt:  INIKDESGLTRIK

SwissProt top hits

e value

%identity

Alignment

Q01111 Ras-related protein YPT3

2.4e-93

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++LN+D+KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        +ENV RWLKEL++HTD NIVVML+GNKSDLRHLVAV T++ K  AE+E LYF+ETSALEA NVE AF E LTQIY IVSKKAVE G+ G+ +S P +GE 
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDESGLTRIKYG
        INIKDE G +  K+G
Subjt:  INIKDESGLTRIKYG

Q39222 Ras-related protein RABA1b

7.4e-95

87.38

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VD KV+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR AT
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENVDRWLKELKNHTD NIVVMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEVLTQIY I SKK VE GE+G+ ASVP +GEK
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDE
        I +K++
Subjt:  INIKDE

Q40194 Ras-related protein Rab11D

6.7e-96

81.04

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        M GYR DD+YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+TLNVD+KV+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR AT
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FEN  RWLKEL++HTD NIVVML+GNKSDLRHLVAVPTEDGKS+AE+ESLYF+ETSALEA NVE AF EVLTQIY IVSK+AVE G++GS++ +P++G+ 
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDESGLTR
        IN+K++S + +
Subjt:  INIKDESGLTR

Q9FK68 Ras-related protein RABA1c

1.8e-93

83.49

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+LNVD KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+T
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENV+ WLKEL+NHTD NIVVMLVGNKSDLRHLVAV TED KS+AEKESLYF+ETSALEA NVE AFAEVLTQI+HIVSKKA+E      +A+VP++G+K
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INI-KDESGLTR
        I+I KD S + +
Subjt:  INI-KDESGLTR

Q9SN35 Ras-related protein RABA1d

9.1e-93

83.74

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+T
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENV+RWL+EL++HTD NIVVMLVGNKSDLRHLVAV TED KS+AE ESLYF+ETSALE+ NVE AF+EVLTQIYH+VSKKA+E GE+  + +VP++GEK
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INI
        I++
Subjt:  INI

Arabidopsis top hits

e value

%identity

Alignment

AT1G06400.1 Ras-related small GTP-binding family protein

9.6e-90

75.83

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRAD++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+T  V+ KV+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRHAT
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FEN  RWL+EL+ HTD NIVVML+GNK DLRHLVAV TE+ K++AE+ESLYF+ETSAL+A NVE AF EVLTQI+ IVSK++V+GG  G +A +P +GE 
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDESGLTR
        IN+K++  + +
Subjt:  INIKDESGLTR

AT1G16920.1 RAB GTPase homolog A1B

5.3e-96

87.38

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYR +DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTL VD KV+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR AT
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENVDRWLKELKNHTD NIVVMLVGNKSDLRHL+AVPTEDGKSYAE+ESL F+ETSALEA NVE AFAEVLTQIY I SKK VE GE+G+ ASVP +GEK
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDE
        I +K++
Subjt:  INIKDE

AT4G18430.1 RAB GTPase homolog A1E

2.5e-85

70.42

Show/hide

Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        M  YRADDDYDYLFK+VLIGDSGVGKSNLLSRFT+NEF++ESKSTIGVEFATR+++VD K+IKAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+TRH T
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENV+RWLKEL++HTD+N+V+MLVGNK+DLRHL AVPTE+ +S++E+E+++F+ETSAL+A NVE+AF  VLTQIY ++S+KA++G   G   S+P +G+ 
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INIKDESGLTRIK
        I+I ++  +T +K
Subjt:  INIKDESGLTRIK

AT4G18800.1 RAB GTPase homolog A1D

6.5e-94

83.74

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+LNV+ KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+T
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENV+RWL+EL++HTD NIVVMLVGNKSDLRHLVAV TED KS+AE ESLYF+ETSALE+ NVE AF+EVLTQIYH+VSKKA+E GE+  + +VP++GEK
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INI
        I++
Subjt:  INI

AT5G45750.1 RAB GTPase homolog A1C

1.3e-94

83.49

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Query:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT
        MAGYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+LNVD KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+T
Subjt:  MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHAT

Query:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK
        FENV+ WLKEL+NHTD NIVVMLVGNKSDLRHLVAV TED KS+AEKESLYF+ETSALEA NVE AFAEVLTQI+HIVSKKA+E      +A+VP++G+K
Subjt:  FENVDRWLKELKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEK

Query:  INI-KDESGLTR
        I+I KD S + +
Subjt:  INI-KDESGLTR

Sequences

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CDS sequence

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ATGGCGGGTTACAGAGCTGATGATGATTACGACTACCTTTTTAAGGTGGTTCTGATTGGGGATTCCGGCGTCGGCAAGTCCAATTTGCTGTCCAGATTTACTAAGAACGA
GTTCAACCTCGAGTCCAAATCCACCATTGGTGTAGAGTTCGCCACCAGGACTTTGAACGTCGATAGTAAAGTTATTAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAA
GGTACCGTGCCATCACCAGTGCCTACTACCGTGGAGCAGTTGGTGCACTCCTCGTATACGATGTCACTCGTCATGCGACATTCGAGAACGTCGACCGGTGGCTAAAAGAA
TTGAAGAACCACACAGATTCCAACATCGTTGTGATGCTTGTTGGAAACAAATCCGATCTTCGCCACCTTGTTGCTGTTCCAACTGAAGATGGAAAGTCGTACGCCGAGAA
GGAATCACTGTATTTCATAGAAACCTCTGCACTAGAAGCAGTCAATGTCGAGAAAGCATTCGCTGAGGTCCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCGGTCG
AAGGCGGAGAAAATGGCTCTGCTGCCTCTGTCCCTGCCCAGGGGGAGAAAATAAACATCAAAGACGAATCGGGTTTAACCAGAATCAAATATGGTTATGAAGAAAAAGGA
AGATATATATATATCCCCAAGACGTTCAATCTTGCTGCATTACAGAAAGAGGAGTACCTTAGCTAG

mRNA sequence

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AATAAGCAAACGTGGACCTTCCTTCACAACTTCCCTTTCTTTTATTGATTTCACGCACTTCCTCCCACTTGATTTTGCATTTCATTGATTCTCTCTCTCTCGCTCTCTCT
CTGGTTCGATTCTTCTTCTTCTTCCTCGTAAAGTTTGAAGTAAATCGAAGCAACAATGGCGGGTTACAGAGCTGATGATGATTACGACTACCTTTTTAAGGTGGTTCTGA
TTGGGGATTCCGGCGTCGGCAAGTCCAATTTGCTGTCCAGATTTACTAAGAACGAGTTCAACCTCGAGTCCAAATCCACCATTGGTGTAGAGTTCGCCACCAGGACTTTG
AACGTCGATAGTAAAGTTATTAAAGCTCAGATTTGGGACACTGCTGGCCAAGAAAGGTACCGTGCCATCACCAGTGCCTACTACCGTGGAGCAGTTGGTGCACTCCTCGT
ATACGATGTCACTCGTCATGCGACATTCGAGAACGTCGACCGGTGGCTAAAAGAATTGAAGAACCACACAGATTCCAACATCGTTGTGATGCTTGTTGGAAACAAATCCG
ATCTTCGCCACCTTGTTGCTGTTCCAACTGAAGATGGAAAGTCGTACGCCGAGAAGGAATCACTGTATTTCATAGAAACCTCTGCACTAGAAGCAGTCAATGTCGAGAAA
GCATTCGCTGAGGTCCTAACTCAGATCTATCACATTGTAAGCAAGAAGGCGGTCGAAGGCGGAGAAAATGGCTCTGCTGCCTCTGTCCCTGCCCAGGGGGAGAAAATAAA
CATCAAAGACGAATCGGGTTTAACCAGAATCAAATATGGTTATGAAGAAAAAGGAAGATATATATATATCCCCAAGACGTTCAATCTTGCTGCATTACAGAAAGAGGAGT
ACCTTAGCTAG

Protein sequence

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MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKE
LKNHTDSNIVVMLVGNKSDLRHLVAVPTEDGKSYAEKESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGENGSAASVPAQGEKINIKDESGLTRIKYGYEEKG
RYIYIPKTFNLAALQKEEYLS

CmoCh16G004690 (gene) of Cucurbita moschata (Rifu) v1 genome