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CmoCh16G005590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G005590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProfilin
Genome locationCmo_Chr16:2726719..2728946
RNA-Seq ExpressionCmoCh16G005590
SyntenyCmoCh16G005590
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005856 - cytoskeleton (cellular component)
GO:0003779 - actin binding (molecular function)
InterPro domainsIPR005455 - Profilin
IPR036140 - Profilin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577112.1 hypothetical protein SDJN03_24686, partial [Cucurbita argyrosperma subsp. sororia]7.7e-7492.99Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN
        MDWAFVRKAWDKWASGSIGTFG          QPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN
Subjt:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN

Query:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL
        WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLS QLGRKNL
Subjt:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL

XP_008451862.1 PREDICTED: uncharacterized protein LOC103493024 [Cucumis melo]2.3e-7087.9Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN
        MDWAFV KAWDKWASGSIGTFG          QPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQF+DFIKRDKPQNESFSIG NQYIMTSVHEN
Subjt:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN

Query:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL
        WFCARCMNTIKHAGEGV+IVQTTAFIL+AMYDGSIAAASRAMA+ADQLS  L RKNL
Subjt:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL

XP_011653239.1 uncharacterized protein LOC105435190 [Cucumis sativus]6.8e-7087.82Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN
        MDWAFV KAWDKWASGSIGTFG          QPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQF+DFIKRDKPQNESFSIG NQYIMTSVHEN
Subjt:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN

Query:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKN
        WFCARCMNTIKHAGEGV+IVQTTAFIL+AMYDGSIAAASRAMA+ADQLS  L RKN
Subjt:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKN

XP_022136632.1 uncharacterized protein LOC111008291 [Momordica charantia]5.2e-7087.9Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN
        MDWAF  KAWDKWAS SIGTFG          QPLKAA+LINYDPTGPSRLLSTIAEQEGIL+NPIELNQFIDFIKRDKPQ ESFSIGSNQYIMTSVHEN
Subjt:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN

Query:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL
        WFCARCMNTIKHAGEGVVIVQT AFILVAMYDGSIAAASRAMA+ADQLS QLGRKNL
Subjt:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL

XP_038878184.1 uncharacterized protein LOC120070329 [Benincasa hispida]1.2e-7189.17Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN
        M+WAFV K WDKWASGSIGTFG          QPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQF+DFIKRDKPQNESFSIGSNQYIMTSVHEN
Subjt:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN

Query:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL
        WFCARCMNTIKHAGEGV+IVQTTAFILVAMYDGSIAAASRAMA+ADQLS QLGRKNL
Subjt:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL

TrEMBL top hitse value%identityAlignment
A0A0A0KV40 Uncharacterized protein7.6e-5991.41Show/hide
Query:  FSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILV
        F + QPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQF+DFIKRDKPQNESFSIG NQYIMTSVHENWFCARCMNTIKHAGEGV+IVQTTAFIL+
Subjt:  FSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILV

Query:  AMYDGSIAAASRAMASADQLSGQLGRKN
        AMYDGSIAAASRAMA+ADQLS  L RKN
Subjt:  AMYDGSIAAASRAMASADQLSGQLGRKN

A0A1Q3AMV2 Profilin domain-containing protein1.7e-5566.88Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN
        MDW FV +AW+KWAS ++G++G          +PLKAALLINYDPTGPSRLLSTIAEQEGI  NPIEL++FIDFI R+KPQ ESF +G NQYI+TS+HE+
Subjt:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN

Query:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL
        WFCARC+NT K AGEG +++QTTAF+LV +YDGSI +ASRAM +ADQ + QL R+NL
Subjt:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL

A0A1S3BTL7 uncharacterized protein LOC1034930241.1e-7087.9Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN
        MDWAFV KAWDKWASGSIGTFG          QPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQF+DFIKRDKPQNESFSIG NQYIMTSVHEN
Subjt:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN

Query:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL
        WFCARCMNTIKHAGEGV+IVQTTAFIL+AMYDGSIAAASRAMA+ADQLS  L RKNL
Subjt:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL

A0A2P5CGN2 Profilin6.0e-5671.34Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN
        MDW+FVRKAWDKWAS ++G FG+   P      PLKAALLINYDPTGPSRLLSTIAEQEGI  NPIEL  F+DFIKRDK Q ESF IG NQY++TS+HEN
Subjt:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN

Query:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL
        WFCARCMNT K AGEG +++QT AFILVA+YDGS+ +ASRAM + DQ   QLGR+NL
Subjt:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL

A0A6J1C603 uncharacterized protein LOC1110082912.5e-7087.9Show/hide
Query:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN
        MDWAF  KAWDKWAS SIGTFG          QPLKAA+LINYDPTGPSRLLSTIAEQEGIL+NPIELNQFIDFIKRDKPQ ESFSIGSNQYIMTSVHEN
Subjt:  MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHEN

Query:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL
        WFCARCMNTIKHAGEGVVIVQT AFILVAMYDGSIAAASRAMA+ADQLS QLGRKNL
Subjt:  WFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G19400.1 Profilin family protein8.3e-5059.87Show/hide
Query:  MDWAFVRKAWDKW-ASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHE
        MD AFV +AWDKW  +G++G+ GN          PLKAA+LINYDPTGPSRLLSTIA+QEGI + P++L QFIDF++      E+F +GSNQYI+TS+HE
Subjt:  MDWAFVRKAWDKW-ASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHE

Query:  NWFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKN
        NWF ARC+NT + AGEG +++QT  ++LVA+YDGSI +AS+AMA+ADQ + QL RKN
Subjt:  NWFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKN

AT4G19410.2 Pectinacetylesterase family protein8.3e-5059.87Show/hide
Query:  MDWAFVRKAWDKW-ASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHE
        MD AFV +AWDKW  +G++G+ GN          PLKAA+LINYDPTGPSRLLSTIA+QEGI + P++L QFIDF++      E+F +GSNQYI+TS+HE
Subjt:  MDWAFVRKAWDKW-ASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHE

Query:  NWFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKN
        NWF ARC+NT + AGEG +++QT  ++LVA+YDGSI +AS+AMA+ADQ + QL RKN
Subjt:  NWFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGGGCATTCGTCCGCAAAGCTTGGGACAAATGGGCTTCCGGCAGCATTGGCACCTTCGGTAACCAACACCGACCGCCATTTTCAATTCGTCAGCCATTGAAAGC
TGCTCTGTTGATCAATTATGATCCTACTGGACCTTCCCGTTTGCTTTCGACCATTGCAGAACAAGAAGGAATATTGCTTAATCCTATAGAACTGAATCAGTTTATCGATT
TCATCAAACGTGACAAACCCCAAAATGAGAGTTTCAGCATCGGCTCAAATCAATACATAATGACATCAGTCCATGAGAATTGGTTTTGTGCAAGGTGCATGAACACTATA
AAGCATGCTGGTGAAGGCGTTGTTATAGTGCAAACAACAGCCTTTATTTTGGTTGCTATGTATGATGGCTCGATTGCAGCAGCGTCTCGCGCTATGGCGTCTGCCGATCA
GTTATCTGGGCAGTTAGGCAGGAAAAATCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTGGGCATTCGTCCGCAAAGCTTGGGACAAATGGGCTTCCGGCAGCATTGGCACCTTCGGTAACCAACACCGACCGCCATTTTCAATTCGTCAGCCATTGAAAGC
TGCTCTGTTGATCAATTATGATCCTACTGGACCTTCCCGTTTGCTTTCGACCATTGCAGAACAAGAAGGAATATTGCTTAATCCTATAGAACTGAATCAGTTTATCGATT
TCATCAAACGTGACAAACCCCAAAATGAGAGTTTCAGCATCGGCTCAAATCAATACATAATGACATCAGTCCATGAGAATTGGTTTTGTGCAAGGTGCATGAACACTATA
AAGCATGCTGGTGAAGGCGTTGTTATAGTGCAAACAACAGCCTTTATTTTGGTTGCTATGTATGATGGCTCGATTGCAGCAGCGTCTCGCGCTATGGCGTCTGCCGATCA
GTTATCTGGGCAGTTAGGCAGGAAAAATCTTTAG
Protein sequenceShow/hide protein sequence
MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTI
KHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL