CuGenDBv2

Gene ID	CmoCh16G005880
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	UvrABC system protein C
Genome location	Cmo_Chr16:2839511..2840089
RNA-Seq Expression	CmoCh16G005880
Synteny	CmoCh16G005880
Gene Ontology terms	NA
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577133.1 hypothetical protein SDJN03_24707, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-106

99.48

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Query:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVL
        MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRA EKERSDAAEDLRSGSGLEVL
Subjt:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVL

Query:  PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT
        PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT
Subjt:  PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT

XP_022931435.1 uncharacterized protein LOC111437614 [Cucurbita moschata]

6.5e-107

100

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Query:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVL
        MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVL
Subjt:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVL

Query:  PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT
        PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT
Subjt:  PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT

XP_022985422.1 uncharacterized protein LOC111483432 [Cucurbita maxima]

2.6e-103

96.35

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Query:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVL
        MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISE LDAGKSYFLLPLSRA EKERSDAA DLR+GSGLEVL
Subjt:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVL

Query:  PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT
        PTGGDGIWRVKLVIDTKQLGEILAE+GNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKF PIDVGNNNKAQ+KDFHSGNGCLYAT
Subjt:  PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT

XP_023522023.1 uncharacterized protein LOC111785895 [Cucurbita pepo subsp. pepo]

1.0e-104

97.92

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Query:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVL
        MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISE LDAGKSYFLLPLSRA EKERSDAAEDLR+GSGLEVL
Subjt:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVL

Query:  PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT
        PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGN+NKAQIKDFHSGNGCLYAT
Subjt:  PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT

XP_038907067.1 uncharacterized protein LOC120092893 [Benincasa hispida]

3.8e-83

80.61

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Query:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAE------DLRSG
        MGNCSLKG+  DCEKPIRILTDSGNIINFHGPKQV QIL NYPPGVYGVFRRPNLSSPLPISE LDAGKSYFLLPLSR  +K ++D  E      +L SG
Subjt:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAE------DLRSG

Query:  SGLEVLPTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLY
        SGLEVLP GG+G+WRVKLVIDTKQLGEILAEEGNTEALIERMRAAAA    +SP+R KIGGWK TWGN  KF PIDVGNNNKAQIKDF +GNGCLY
Subjt:  SGLEVLPTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYF7 Uncharacterized protein

1.5e-80

79.79

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Query:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERS-----DAAEDLRSGS
        MGNCSLKG+A DCEKPIRILTDSG+IINFHGPKQV QIL NYPPG+YGVFRRPNLSSPLP+SE LDAGKSYFLLPLS++     S       ++D+ S S
Subjt:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERS-----DAAEDLRSGS

Query:  GLEVLPTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFH
        GLEVLP GG+G+WRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRR KIGGWKP WGNW KF PIDVGN+NKAQ+K F+
Subjt:  GLEVLPTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFH

A0A1S3BTS2 uncharacterized protein LOC103493080

1.1e-78

78.72

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Query:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSD----AAEDLRSGSG
        MGNCSLKG+A DC KPIRILTDSG+IINFHGPKQV QIL NYPPG+YGVFRRPNLSSPLP SE LDAGKSYFLLPLS+      S      ++DL S SG
Subjt:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSD----AAEDLRSGSG

Query:  LEVLPTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHS
        LEVLP  G+G+WRVKLVIDTKQLGEILAEEGNTEALIER+RAAAATAAVQSPRR KI GWKP WGNW KF P+D GNNNKAQIK+F+S
Subjt:  LEVLPTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHS

A0A5A7TTS6 Uncharacterized protein

1.1e-78

78.72

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Query:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSD----AAEDLRSGSG
        MGNCSLKG+A DC KPIRILTDSG+IINFHGPKQV QIL NYPPG+YGVFRRPNLSSPLP SE LDAGKSYFLLPLS+      S      ++DL S SG
Subjt:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSD----AAEDLRSGSG

Query:  LEVLPTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHS
        LEVLP  G+G+WRVKLVIDTKQLGEILAEEGNTEALIER+RAAAATAAVQSPRR KI GWKP WGNW KF P+D GNNNKAQIK+F+S
Subjt:  LEVLPTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHS

A0A6J1EZE8 uncharacterized protein LOC111437614

3.1e-107

100

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Query:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVL
        MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVL
Subjt:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVL

Query:  PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT
        PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT
Subjt:  PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT

A0A6J1J4V0 uncharacterized protein LOC111483432

1.2e-103

96.35

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Query:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVL
        MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISE LDAGKSYFLLPLSRA EKERSDAA DLR+GSGLEVL
Subjt:  MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVL

Query:  PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT
        PTGGDGIWRVKLVIDTKQLGEILAE+GNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKF PIDVGNNNKAQ+KDFHSGNGCLYAT
Subjt:  PTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G64700.1 unknown protein

1.5e-05

24.87

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Query:  MGNCSLKGVAADCEK-PIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLS-SPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGS-GL
        MGNC   G+  + E   I+++   G ++ F+ P     +   +    + +F   +L   PL    LL  G+SY+L P   + E +    +  +RS S  L
Subjt:  MGNCSLKGVAADCEK-PIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLS-SPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGS-GL

Query:  EVLP----------------------------------------TGGDG-IWRVKLVIDTKQLGEILAEEGNTEALIERMRAAA--ATAAVQSPRRE
          +                                         T   G IW+V L+I+T++L +IL+E+G T  LIE +RA A   T+++ S   E
Subjt:  EVLP----------------------------------------TGGDG-IWRVKLVIDTKQLGEILAEEGNTEALIERMRAAA--ATAAVQSPRRE

AT3G61920.1 unknown protein

3.1e-14

34.62

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Query:  MGNCSLKGVAAD------CEKPIRILTDSGNIINFHGPKQVDQILKNYPPGV-YGVFRRPNLSSPLPISELLDAGKSYFLLPL-SRAVEKERSDAAEDL-
        MGNC  KG           +  I+++T +G ++  H P   + I   +P  V +      + S PL   E L  G  Y+LLPL S A    + D+++ L 
Subjt:  MGNCSLKGVAAD------CEKPIRILTDSGNIINFHGPKQVDQILKNYPPGV-YGVFRRPNLSSPLPISELLDAGKSYFLLPL-SRAVEKERSDAAEDL-

Query:  ---RSGSG----LEVLPTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAA
           R   G    +  L  GG G+W+V+LVI  +QL EILAE+  TEAL+E +R  A
Subjt:  ---RSGSG----LEVLPTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAA

AT4G10910.1 unknown protein

1.1e-08

53.7

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Query:  GSGLEVLPTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQS
        G  ++V P   +G+W+ K+VI +KQL EILA EGNT ALI+++R AAA A V S
Subjt:  GSGLEVLPTGGDGIWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQS

Sequences

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CDS sequence

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ATGGGAAACTGTTCTCTGAAAGGAGTGGCCGCCGATTGCGAAAAGCCCATCAGAATCTTAACGGATTCCGGCAACATAATCAACTTCCATGGCCCTAAACAAGTCGATCA
AATCCTCAAGAACTATCCTCCCGGCGTCTATGGCGTTTTCCGGCGCCCCAATCTCTCTTCGCCATTACCCATTTCGGAGCTCCTCGACGCCGGAAAATCCTACTTTCTCC
TCCCGCTTTCCCGAGCCGTAGAGAAAGAGAGGTCCGATGCGGCCGAGGATCTGAGAAGTGGGTCGGGGCTGGAAGTGCTACCGACAGGTGGCGACGGCATTTGGAGGGTC
AAATTGGTGATTGATACGAAACAGTTGGGGGAAATTTTGGCAGAGGAAGGGAACACAGAGGCGTTGATTGAGAGGATGAGAGCGGCGGCGGCGACGGCGGCGGTGCAGAG
TCCACGGCGGGAGAAGATCGGAGGGTGGAAGCCGACATGGGGGAATTGGTCGAAGTTTCTTCCAATTGATGTTGGAAACAATAATAAAGCACAAATCAAGGATTTTCATT
CTGGAAATGGGTGTTTATATGCTACATAA

mRNA sequence

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Protein sequence

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MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLPISELLDAGKSYFLLPLSRAVEKERSDAAEDLRSGSGLEVLPTGGDGIWRV
KLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNNKAQIKDFHSGNGCLYAT

CmoCh16G005880 (gene) of Cucurbita moschata (Rifu) v1 genome