; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G005950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G005950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:2894768..2895175
RNA-Seq ExpressionCmoCh16G005950
SyntenyCmoCh16G005950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577140.1 hypothetical protein SDJN03_24714, partial [Cucurbita argyrosperma subsp. sororia]2.9e-6198.52Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
        MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLP QGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR

Query:  MLSRCSDGGVLEFGDVASELMRIPAARVSSSMVVN
        MLSRCSDGGVLEF DVASELMRIPAARVSSSMVVN
Subjt:  MLSRCSDGGVLEFGDVASELMRIPAARVSSSMVVN

KAG7015140.1 hypothetical protein SDJN02_22773, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-6299.26Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
        MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR

Query:  MLSRCSDGGVLEFGDVASELMRIPAARVSSSMVVN
        MLSRCSDGGVLEF DVASELMRIPAARVSSSMVVN
Subjt:  MLSRCSDGGVLEFGDVASELMRIPAARVSSSMVVN

XP_022931429.1 uncharacterized protein LOC111437608 [Cucurbita moschata]2.9e-61100Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
        MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR

Query:  MLSRCSDGGVLEFGDVASELMRIPAARVSSSM
        MLSRCSDGGVLEFGDVASELMRIPAARVSSSM
Subjt:  MLSRCSDGGVLEFGDVASELMRIPAARVSSSM

XP_023522331.1 uncharacterized protein LOC111786247 [Cucurbita pepo subsp. pepo]1.1e-6099.24Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
        MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR

Query:  MLSRCSDGGVLEFGDVASELMRIPAARVSSSM
        MLSRCS+GGVLEFGDVASELMRIPAARVSSSM
Subjt:  MLSRCSDGGVLEFGDVASELMRIPAARVSSSM

XP_023552096.1 uncharacterized protein LOC111809864 [Cucurbita pepo subsp. pepo]2.5e-6098.48Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
        MIGNLISSLNKKLQAV+ISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR

Query:  MLSRCSDGGVLEFGDVASELMRIPAARVSSSM
        MLSRCS+GGVLEFGDVASELMRIPAARVSSSM
Subjt:  MLSRCSDGGVLEFGDVASELMRIPAARVSSSM

TrEMBL top hitse value%identityAlignment
A0A0A0KYE1 Uncharacterized protein4.2e-4274.65Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKVKKRVRFADTEPVIIAI--DREERSTEEETEKKVVRITVKL
        MI NLISSLNKKLQAVEIS+RC+RTKKT  VYR +++KK      S   P     EI+KVKKRVRFADTEPVIIAI  DREE   E ETEKKVVRITVKL
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKVKKRVRFADTEPVIIAI--DREERSTEEETEKKVVRITVKL

Query:  TKQEANRMLSRCSDGGVLEFGDVASELMRIPAARVSSSMVVN
        TKQEANRMLSRCS+GGVLEFGDVASELMRIP  RV SS+V N
Subjt:  TKQEANRMLSRCSDGGVLEFGDVASELMRIPAARVSSSMVVN

A0A1S3BS40 uncharacterized protein LOC1034930981.3e-4375.71Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTK
        MI NLISSLNKKLQAVEISNRC+RTKKTT VYR D++KKK     S   P     EI+KVKKRVRFADTEPVIIAI  +    EEETEKKVVRITVKLTK
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTK

Query:  QEANRMLSRCSDGGVLEFGDVASELMRIPAARVSSSMVVN
        QEANRMLSRCS+ GVLEFGDVASEL+RIP  RVSSS+V N
Subjt:  QEANRMLSRCSDGGVLEFGDVASELMRIPAARVSSSMVVN

A0A5D3D246 Uncharacterized protein1.3e-4375.71Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTK
        MI NLISSLNKKLQAVEISNRC+RTKKTT VYR D++KKK     S   P     EI+KVKKRVRFADTEPVIIAI  +    EEETEKKVVRITVKLTK
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKP-----EIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTK

Query:  QEANRMLSRCSDGGVLEFGDVASELMRIPAARVSSSMVVN
        QEANRMLSRCS+ GVLEFGDVASEL+RIP  RVSSS+V N
Subjt:  QEANRMLSRCSDGGVLEFGDVASELMRIPAARVSSSMVVN

A0A6J1EU86 uncharacterized protein LOC1114376081.4e-61100Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
        MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANR

Query:  MLSRCSDGGVLEFGDVASELMRIPAARVSSSM
        MLSRCSDGGVLEFGDVASELMRIPAARVSSSM
Subjt:  MLSRCSDGGVLEFGDVASELMRIPAARVSSSM

A0A6J1JBA8 uncharacterized protein LOC1114834361.9e-5897.01Show/hide
Query:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQ--LPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEA
        MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYR DMSKKKQPQ   PSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEA
Subjt:  MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQ--LPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEA

Query:  NRMLSRCSDGGVLEFGDVASELMRIPAARVSSSM
        NRMLSRCSDGGVLEFGDVASELMRIPAARVSSSM
Subjt:  NRMLSRCSDGGVLEFGDVASELMRIPAARVSSSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGCAATTTGATTTCAAGCTTGAACAAAAAGTTGCAGGCGGTTGAGATCAGTAATCGCTGCAGACGAACGAAGAAGACGACTAACGTATACAGAGGCGAT
ATGAGCAAGAAGAAGCAGCCGCAGTTGCCGTCGCAGGGGAAGCCGGAGATCGAGAAAGTGAAGAAGAGAGTGAGATTTGCAGATACGGAACCGGTGATAATCGCC
ATTGACAGAGAGGAGCGGAGTACAGAGGAGGAAACAGAGAAGAAAGTGGTTAGAATTACGGTGAAATTGACGAAGCAAGAAGCGAATCGGATGCTTTCGAGGTGC
TCCGATGGCGGCGTTCTAGAATTCGGAGATGTTGCGAGTGAGCTCATGCGGATTCCTGCGGCCCGCGTTAGCTCTTCTATGGTAGTCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGCAATTTGATTTCAAGCTTGAACAAAAAGTTGCAGGCGGTTGAGATCAGTAATCGCTGCAGACGAACGAAGAAGACGACTAACGTATACAGAGGCGAT
ATGAGCAAGAAGAAGCAGCCGCAGTTGCCGTCGCAGGGGAAGCCGGAGATCGAGAAAGTGAAGAAGAGAGTGAGATTTGCAGATACGGAACCGGTGATAATCGCC
ATTGACAGAGAGGAGCGGAGTACAGAGGAGGAAACAGAGAAGAAAGTGGTTAGAATTACGGTGAAATTGACGAAGCAAGAAGCGAATCGGATGCTTTCGAGGTGC
TCCGATGGCGGCGTTCTAGAATTCGGAGATGTTGCGAGTGAGCTCATGCGGATTCCTGCGGCCCGCGTTAGCTCTTCTATGGTAGTCAATTGA
Protein sequenceShow/hide protein sequence
MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRGDMSKKKQPQLPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRC
SDGGVLEFGDVASELMRIPAARVSSSMVVN