; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G006060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G006060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:2948112..2948540
RNA-Seq ExpressionCmoCh16G006060
SyntenyCmoCh16G006060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577150.1 hypothetical protein SDJN03_24724, partial [Cucurbita argyrosperma subsp. sororia]8.6e-3498.77Show/hide
Query:  MPMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASE
        MPMSKPSS LSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASE
Subjt:  MPMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASE

KAG6600527.1 hypothetical protein SDJN03_05760, partial [Cucurbita argyrosperma subsp. sororia]6.4e-2980.22Show/hide
Query:  MPMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRIS
        +PMSK SS LSRSL K+LRSLFR K NS +SIF  RDQPKDGFYVFYEVGSLSTIPEVPEADFG GLSPEI SLV+KTASE F  NSL IS
Subjt:  MPMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRIS

KAG7015150.1 hypothetical protein SDJN02_22783, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-3896.7Show/hide
Query:  MPMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRIS
        MPMSKPSS LSRSLSKILRSLF SKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASE FMPNSLRIS
Subjt:  MPMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRIS

XP_008451959.1 PREDICTED: uncharacterized protein LOC103493107 [Cucumis melo]5.8e-3080.22Show/hide
Query:  SKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRISWII
        SK SS  SRS SKILRSLFR KPNSN+ IF  +DQP+DGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASE F PNS+ IS ++
Subjt:  SKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRISWII

XP_011654341.1 uncharacterized protein LOC105435347 [Cucumis sativus]9.8e-3078.49Show/hide
Query:  PMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRISWII
        PMSK SS  SRS SKILRSLFR KPNSN+ IF  +DQP+DGFYVFYEVGSLSTIPEVPEAD GAGLSPEISSLVKKTAS  F PNS+ IS ++
Subjt:  PMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRISWII

TrEMBL top hitse value%identityAlignment
A0A0A0KV10 Uncharacterized protein4.8e-3078.49Show/hide
Query:  PMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRISWII
        PMSK SS  SRS SKILRSLFR KPNSN+ IF  +DQP+DGFYVFYEVGSLSTIPEVPEAD GAGLSPEISSLVKKTAS  F PNS+ IS ++
Subjt:  PMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRISWII

A0A1S3BTI3 uncharacterized protein LOC1034931072.8e-3080.22Show/hide
Query:  SKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRISWII
        SK SS  SRS SKILRSLFR KPNSN+ IF  +DQP+DGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASE F PNS+ IS ++
Subjt:  SKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRISWII

A0A5D3CYZ1 Putative inactive serine/threonine-protein kinase slob1 isoform X12.8e-3080.22Show/hide
Query:  SKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRISWII
        SK SS  SRS SKILRSLFR KPNSN+ IF  +DQP+DGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASE F PNS+ IS ++
Subjt:  SKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRISWII

A0A6J1FQ62 uncharacterized protein LOC1114472273.1e-2980.22Show/hide
Query:  MPMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRIS
        +PMSK SS LSRSL K+LRSLFR K NS +SIF  RDQPKDGFYVFYEVGSLSTIPEVPEADFG GLSPEI SLV+KTASE F  NSL IS
Subjt:  MPMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRIS

A0A6J1JF52 uncharacterized protein LOC1114863403.1e-2980.22Show/hide
Query:  MPMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRIS
        +PMSK SS LSRSL K+LRSLFR K NS +SIF  RDQPKDGFYVFYEVGSLSTIPEVPEADFG GLSPEI SLV+KTASE F  NSL IS
Subjt:  MPMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64340.1 unknown protein6.2e-0638.2Show/hide
Query:  PSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKD---GFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRIS
        P+  +SRSL K+++S+F+ K   ++++F T     D    + VF + GSL+TIPE  E+    G   EI+SLV+KT SE    + L +S
Subjt:  PSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKD---GFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRIS

AT5G41810.1 unknown protein3.3e-0742.86Show/hide
Query:  KPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQP-----------KDGFYVFYE-VGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGF
        K S+ +SRSL + L+S+F  KP  + S+  T   P           KD +YV Y+  GSL+TIPE  E +    +SPEI+SLV+KT SE F
Subjt:  KPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQP-----------KDGFYVFYE-VGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGF

AT5G41810.2 unknown protein3.3e-0742.86Show/hide
Query:  KPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQP-----------KDGFYVFYE-VGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGF
        K S+ +SRSL + L+S+F  KP  + S+  T   P           KD +YV Y+  GSL+TIPE  E +    +SPEI+SLV+KT SE F
Subjt:  KPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQP-----------KDGFYVFYE-VGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCATGTCCAAGCCTTCTTCCAACTTATCTCGCTCGCTTTCCAAAATACTCCGGTCGCTTTTTCGATCCAAACCTAACTCAAATAGCTCCATTTTTCTGACTCGAGA
TCAACCCAAAGATGGGTTTTATGTCTTCTATGAAGTCGGGTCGCTCTCGACCATCCCTGAAGTCCCCGAGGCCGACTTTGGAGCCGGTCTTTCGCCGGAGATTAGCTCTT
TGGTGAAGAAGACGGCTTCTGAGGGGTTCATGCCTAACTCCCTCCGCATCTCATGGATTATAATCATGCAGCTTAAGCTTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCATGTCCAAGCCTTCTTCCAACTTATCTCGCTCGCTTTCCAAAATACTCCGGTCGCTTTTTCGATCCAAACCTAACTCAAATAGCTCCATTTTTCTGACTCGAGA
TCAACCCAAAGATGGGTTTTATGTCTTCTATGAAGTCGGGTCGCTCTCGACCATCCCTGAAGTCCCCGAGGCCGACTTTGGAGCCGGTCTTTCGCCGGAGATTAGCTCTT
TGGTGAAGAAGACGGCTTCTGAGGGGTTCATGCCTAACTCCCTCCGCATCTCATGGATTATAATCATGCAGCTTAAGCTTGCATAA
Protein sequenceShow/hide protein sequence
MPMSKPSSNLSRSLSKILRSLFRSKPNSNSSIFLTRDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASEGFMPNSLRISWIIIMQLKLA