CuGenDBv2

Gene ID	CmoCh16G006360
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	stress-response A/B barrel domain-containing protein UP3
Genome location	Cmo_Chr16:3134132..3137938
RNA-Seq Expression	CmoCh16G006360
Synteny	CmoCh16G006360
Gene Ontology terms	NA
InterPro domains	IPR011008 - Dimeric alpha-beta barrel IPR013097 - Stress responsive alpha-beta barrel IPR044662 - Stress-response A/B barrel domain-containing protein HS1/DABB1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6577184.1 hypothetical protein SDJN03_24758, partial [Cucurbita argyrosperma subsp. sororia]

6.0e-149

100

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Query:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
        MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
Subjt:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR

Query:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
        GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
Subjt:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL

Query:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRS
        EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRS
Subjt:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRS

KAG7015181.1 hypothetical protein SDJN02_22814 [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-158

90.82

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Query:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
        MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
Subjt:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR

Query:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
        GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
Subjt:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL

Query:  EDALNSLEQLAIDNPSLIVQFTQ-----------------------------GLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK
        EDALNSLEQLAIDNPSLIVQFTQ                             GLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK
Subjt:  EDALNSLEQLAIDNPSLIVQFTQ-----------------------------GLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQK

Query:  TVSLHFSVDPVGTEIM
        TVSLHFSVDPVGTEIM
Subjt:  TVSLHFSVDPVGTEIM

XP_022931509.1 stress-response A/B barrel domain-containing protein UP3 [Cucurbita moschata]

2.5e-163

100

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Query:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
        MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
Subjt:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR

Query:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
        GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
Subjt:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL

Query:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM
        EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM
Subjt:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM

XP_022985456.1 stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita maxima]

5.8e-160

97.91

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Query:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
        MLIQA+SPNPH FFLPRSPSTSRH SVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN GKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
Subjt:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR

Query:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
        GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSR+LNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
Subjt:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL

Query:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM
        EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSL+FSVDPVGTEIM
Subjt:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM

XP_023552209.1 stress-response A/B barrel domain-containing protein UP3 isoform X1 [Cucurbita pepo subsp. pepo]

6.2e-162

99.3

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Query:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
        MLIQAHSPNPHVFFLPRSPS SRH SVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
Subjt:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR

Query:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
        GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
Subjt:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL

Query:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM
        EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM
Subjt:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUW3 Uncharacterized protein

1.4e-140

86.41

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Query:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
        MLIQA+S NPH FFLP +PS S H S +VSHS  LK+P+GRR E +SRISASGEH+PT   GKKRKVFEHISLLKA+ENISEEEEND+LDYLYTTQYQMR
Subjt:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR

Query:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
        GIVAVSLGRAC QN+E YTHGVYMRFQ KEDLEKFYVNPFY RVLNEHVMPYCHGL+HVDY+SEVEDDMLPIFRKGEEFNYGVEFVLLIKF QDSFGKPL
Subjt:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL

Query:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM
        EDALNSLE+L IDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSI AFE+FTGSS YKD+W+SKFQPIIQKTV+LHFSVDPVGTEIM
Subjt:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM

A0A1S4DYT7 stress-response A/B barrel domain-containing protein UP3 isoform X1

3.9e-138

84.67

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Query:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
        MLIQA+S NPH FFLP +PS S H S +VSHS  LK+P+GRR E +SRISASGEH+PT   GKKRKVFEHISLLKA+ENISE+EEND+LDYLYTTQYQMR
Subjt:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR

Query:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
        GIVAVSLGRAC QN+  YTHGVYMRFQ KEDLEKFYVNPFY RVLNEHVMPYCHGL+HVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKF QDSFGKPL
Subjt:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL

Query:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM
        EDALNSLE+L IDNPSLIVQFTQGLNFNP+CKEFTHGVVIRFRSI AFE+FT S++YKD W+SKFQPI+QKTV LHFSVDPVGTEIM
Subjt:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM

A0A6J1C445 stress-response A/B barrel domain-containing protein UP3

4.1e-143

87.8

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Query:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
        MLIQAHSPNPH FFL  +PS SRHFS+HVSH  GLKAP+GRR+   S+ISASGEHSPT N GKKRKVFEHISLLKA+ENISE+EEND+LDYLYTTQYQM 
Subjt:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR

Query:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
        GIVAVSLGRAC QN+E YTH VYMRFQRKEDLEKFYVNPFYSRVL EHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFG+PL
Subjt:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL

Query:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM
        EDALNSLE+L I NPSLIVQFTQG NFNPSCKEFTHG+VIRFRSI AFE+FTG SDYK+MWRSKFQPIIQKTVSLHFSVDPVGTEIM
Subjt:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM

A0A6J1EUF6 stress-response A/B barrel domain-containing protein UP3

1.2e-163

100

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Query:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
        MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
Subjt:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR

Query:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
        GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
Subjt:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL

Query:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM
        EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM
Subjt:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM

A0A6J1J4Y2 stress-response A/B barrel domain-containing protein UP3 isoform X1

2.8e-160

97.91

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Query:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
        MLIQA+SPNPH FFLPRSPSTSRH SVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTN GKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR
Subjt:  MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMR

Query:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
        GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSR+LNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL
Subjt:  GIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPL

Query:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM
        EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSL+FSVDPVGTEIM
Subjt:  EDALNSLEQLAIDNPSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G51360.1 dimeric A/B barrel domainS-protein 1

2.3e-05

21.46

Show/hide

Query:  VFEHISLLKAR-ENISEEEENDLLDYL--YTTQYQMRGIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYES
        + EH+ L K   +++   + N +++ +       Q+  +   S+ R     +  +TH ++ R++ KEDL  + ++P + RV+ E        ++ VD+ +
Subjt:  VFEHISLLKAR-ENISEEEENDLLDYL--YTTQYQMRGIVAVSLGRACGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYES

Query:  EVEDDML--PIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPS-CKEFTHGVVIRFRSIEAFEMFTGSSDYKDM
        E   + L  P+   G+        + L+K  ++     +E+A   + ++  +    I Q T G NF+P   K+F+ G +  FR +   E      D   +
Subjt:  EVEDDML--PIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQFTQGLNFNPS-CKEFTHGVVIRFRSIEAFEMFTGSSDYKDM

Query:  WRSKFQPIIQKTVSLHFSV
           K +  +  T+ + F+V
Subjt:  WRSKFQPIIQKTVSLHFSV

AT2G32500.1 Stress responsive alpha-beta barrel domain protein

1.3e-85

57.88

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Query:  LPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQN
        LPR P  +R F   VS+  G+     R   P     A+ +   ++ S K RKV EH+ LLKA+E +SEE E D+LDYLYTTQYQMRGIVA+S+G    +N
Subjt:  LPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRACGQN

Query:  SESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDN
        +E +TH +YMRFQ+KEDL+KFY NPF+ +VLNE+V P+CHGL +VDYESEVEDD+L IFRKGEE+NYG EFVLLI F + +  K  +DA++S  QL    
Subjt:  SESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDN

Query:  PSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM
        PSLIVQ TQG NFN S KEFTH  V+RFRS +A E+F    +YKDMWRS+F+P I+K+ +LHFSVDPVGT++M
Subjt:  PSLIVQFTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTCATTCAAGCTCACTCCCCAAACCCACATGTCTTCTTCCTTCCCAGAAGCCCTTCAACTTCCCGCCATTTCTCCGTCCATGTTTCTCATTCACGTGGACTCAAAGC
GCCGATGGGGCGACGAAATGAACCATTGTCTAGGATTTCGGCTTCGGGGGAGCACAGTCCAACCACCAATTCGGGGAAGAAAAGAAAGGTTTTCGAACACATTTCTCTGC
TCAAAGCGAGGGAAAATATTTCAGAAGAAGAAGAGAACGATCTGCTTGATTATCTCTATACCACCCAGTATCAAATGCGGGGCATTGTTGCCGTTTCATTAGGACGTGCC
TGTGGCCAAAATAGTGAAAGCTATACCCATGGTGTGTATATGCGTTTCCAACGAAAGGAAGACCTTGAAAAATTCTATGTGAACCCTTTCTACTCGCGAGTACTAAATGA
GCATGTGATGCCTTATTGTCATGGATTGATTCATGTAGATTATGAATCAGAGGTGGAAGATGACATGCTTCCCATTTTTCGGAAAGGAGAGGAGTTCAATTATGGTGTGG
AGTTTGTGCTTCTCATTAAATTTCTTCAAGATTCATTTGGAAAACCTTTAGAAGACGCATTAAATTCTCTCGAGCAACTGGCAATTGATAACCCTTCTTTAATTGTCCAG
TTTACACAAGGTTTAAATTTTAATCCCAGTTGTAAGGAGTTCACACATGGAGTTGTTATACGATTTCGGTCAATCGAAGCCTTCGAGATGTTTACAGGCAGCTCAGATTA
CAAAGATATGTGGAGGTCTAAGTTTCAACCAATCATCCAGAAAACAGTGTCTCTTCATTTCTCTGTTGACCCAGTAGGGACTGAGATCATGTAG

mRNA sequence

Show/hide mRNA sequence

GTTATGATGATCGGTTTTCGTAGTCCACCCATTTTTGTGTCCCATAGCTTCTCATCAATGTCCATGGCGGATCTTGAGGCTCAAACCTCGACTAACCCAAGCAATTTCAG
ATAGAGAGACCTCCACACTTTAACCATCGCAATGCTCATTCAAGCTCACTCCCCAAACCCACATGTCTTCTTCCTTCCCAGAAGCCCTTCAACTTCCCGCCATTTCTCCG
TCCATGTTTCTCATTCACGTGGACTCAAAGCGCCGATGGGGCGACGAAATGAACCATTGTCTAGGATTTCGGCTTCGGGGGAGCACAGTCCAACCACCAATTCGGGGAAG
AAAAGAAAGGTTTTCGAACACATTTCTCTGCTCAAAGCGAGGGAAAATATTTCAGAAGAAGAAGAGAACGATCTGCTTGATTATCTCTATACCACCCAGTATCAAATGCG
GGGCATTGTTGCCGTTTCATTAGGACGTGCCTGTGGCCAAAATAGTGAAAGCTATACCCATGGTGTGTATATGCGTTTCCAACGAAAGGAAGACCTTGAAAAATTCTATG
TGAACCCTTTCTACTCGCGAGTACTAAATGAGCATGTGATGCCTTATTGTCATGGATTGATTCATGTAGATTATGAATCAGAGGTGGAAGATGACATGCTTCCCATTTTT
CGGAAAGGAGAGGAGTTCAATTATGGTGTGGAGTTTGTGCTTCTCATTAAATTTCTTCAAGATTCATTTGGAAAACCTTTAGAAGACGCATTAAATTCTCTCGAGCAACT
GGCAATTGATAACCCTTCTTTAATTGTCCAGTTTACACAAGGTTTAAATTTTAATCCCAGTTGTAAGGAGTTCACACATGGAGTTGTTATACGATTTCGGTCAATCGAAG
CCTTCGAGATGTTTACAGGCAGCTCAGATTACAAAGATATGTGGAGGTCTAAGTTTCAACCAATCATCCAGAAAACAGTGTCTCTTCATTTCTCTGTTGACCCAGTAGGG
ACTGAGATCATGTAGCAAGGAGTATTCTTGGTTTTGGTACCAGACTTGGTTTTACTCTTAACAAGCGCTTGGCTACCATTAATCTGACATGAAGACAGAATCAGGAGGTA
CAGGTTATTGCGACGTTCTCGACACCCACTCACTTGGATGGTGAGGCCATTTTATATGTGTTCTGGATGTTATTTTTCTATTTTGTACAACTCATATTATAGGTACTTGA
GATATTGAATCTACAATGAGAGAAATCTGTATATCGAATCTTATGCAATTCGATGTTTGCGTTTATGCTTATTGTTTCCCCTCAAGGTGAGAGCTGAGG

Protein sequence

Show/hide protein sequence

MLIQAHSPNPHVFFLPRSPSTSRHFSVHVSHSRGLKAPMGRRNEPLSRISASGEHSPTTNSGKKRKVFEHISLLKARENISEEEENDLLDYLYTTQYQMRGIVAVSLGRA
CGQNSESYTHGVYMRFQRKEDLEKFYVNPFYSRVLNEHVMPYCHGLIHVDYESEVEDDMLPIFRKGEEFNYGVEFVLLIKFLQDSFGKPLEDALNSLEQLAIDNPSLIVQ
FTQGLNFNPSCKEFTHGVVIRFRSIEAFEMFTGSSDYKDMWRSKFQPIIQKTVSLHFSVDPVGTEIM

CmoCh16G006360 (gene) of Cucurbita moschata (Rifu) v1 genome