; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G006380 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G006380
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:3144070..3148424
RNA-Seq ExpressionCmoCh16G006380
SyntenyCmoCh16G006380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015183.1 hypothetical protein SDJN02_22816, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-8183.33Show/hide
Query:  VQFIKVAIAITNRGRGFERVRVAAAKERRLDSNNFSNSSRSLSDSFFADITLLSSSFLSIAILSYESVDLGFEHLDLLRERFRLRILQRKRSAHAVSLIA
        ++FIKVAIAITNRG GFERVRVAAAKERRLDSNNFSNSSRSLSDSFFADITLLSSSFLS                            QRKRSAHAVSLIA
Subjt:  VQFIKVAIAITNRGRGFERVRVAAAKERRLDSNNFSNSSRSLSDSFFADITLLSSSFLSIAILSYESVDLGFEHLDLLRERFRLRILQRKRSAHAVSLIA

Query:  PEVDTAPVYRKDHGFPVSISHNQAQAAPFVSLARPYLSYAARFHRRVPSLFAPVHILFYHSFDPSQDLQVLLAHHPLLQPSWPLIFHSSSAPASPRDLVP
        PEVDTAPVYRKDHGFPVSISHNQAQAA FV LARPYLSYAARFHRRVPSLFAPVH+LFYHSFDPSQDLQVLLAHHPLLQPSWPLIFHSSSAPASPRDLVP
Subjt:  PEVDTAPVYRKDHGFPVSISHNQAQAAPFVSLARPYLSYAARFHRRVPSLFAPVHILFYHSFDPSQDLQVLLAHHPLLQPSWPLIFHSSSAPASPRDLVP

Query:  LKST
        LKST
Subjt:  LKST
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATTCAAGTACAATTCATCAAGGTTGCCATTGCTATCACCAACCGTGGGAGAGGTTTTGAACGAGTTCGTGTTGCTGCAGCGAAAGAGAGGCGATTGGATTCTAA
CAATTTCTCTAACTCATCCAGGAGTTTGTCGGATTCTTTCTTTGCCGATATAACCTTGCTCTCCAGCTCGTTTCTTTCGATTGCTATTCTCTCCTACGAGTCGGTCGATC
TCGGATTTGAGCATTTGGATCTCCTGAGAGAACGATTCAGACTTCGTATCCTGCAGCGGAAGAGGAGCGCTCATGCTGTATCTTTAATTGCTCCTGAAGTTGACACTGCT
CCAGTTTACAGGAAAGATCATGGTTTTCCTGTTTCAATATCTCATAATCAAGCGCAAGCTGCTCCGTTTGTATCGCTAGCTCGTCCTTATCTCTCATATGCAGCTCGATT
TCATCGTAGAGTTCCATCACTTTTTGCTCCAGTTCATATACTTTTCTATCATTCTTTTGATCCTTCACAAGATCTTCAAGTGCTTTTAGCTCATCATCCTCTTCTTCAGC
CTTCTTGGCCTCTGATATTTCACAGTTCTTCTGCTCCAGCATCTCCTCGAGATCTTGTACCGCTAAAATCAACTCAGTATTCGATTCTTGCGTTTTCTGTAGCTAGCCCG
CAGATCCCCATGTTCAAACTGCAGTTTGTTTTTAACTTTTGCATCATCCATGTGCTTTTGAAAGCCCTTCAACTTCTCGCATTCTGCTCTCCATTCATCTCTCTCCGCTT
TCAAGCTAGAAACCTCACTCATAAGATCATGGCTTCTCTTATTCTCTTTCGCAATCTGTTTACGAAGCGTCTGCAACTCCATATCCGACATGTCTGCTCGTCTGCTCAAC
ACAGAAAGCTCATTCTTAAGTTCCTCATTCTCAATATCAGTTTCCTTTTTGGACCTTCCTCCTACAATGCCATTGACTCCCGAATCATCGGTTTGATCAGATTGAACCGA
CCACTTCCACGGGAATGCATGATTCTCTTCACGAGCAGCATCTTCCTGAATCCTCTGTATCCAAATCTGTACAGAACAAGAAACTTGAACACTAACATCTTTGAACAAAA
AAGTACCGACACAGAGATAGAGATAGAGAAACTAACATGCAAAACTGCAGAATTTGAATTGTGGAGGGGAAGAGAAGCAGAGAAAGGCTTGGTGGTTTCAGCATATTTAG
CAAAATCAATAGAAACTTCACCAAGTAAACCAGCTTTGGTCAATCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATTCAAGTACAATTCATCAAGGTTGCCATTGCTATCACCAACCGTGGGAGAGGTTTTGAACGAGTTCGTGTTGCTGCAGCGAAAGAGAGGCGATTGGATTCTAA
CAATTTCTCTAACTCATCCAGGAGTTTGTCGGATTCTTTCTTTGCCGATATAACCTTGCTCTCCAGCTCGTTTCTTTCGATTGCTATTCTCTCCTACGAGTCGGTCGATC
TCGGATTTGAGCATTTGGATCTCCTGAGAGAACGATTCAGACTTCGTATCCTGCAGCGGAAGAGGAGCGCTCATGCTGTATCTTTAATTGCTCCTGAAGTTGACACTGCT
CCAGTTTACAGGAAAGATCATGGTTTTCCTGTTTCAATATCTCATAATCAAGCGCAAGCTGCTCCGTTTGTATCGCTAGCTCGTCCTTATCTCTCATATGCAGCTCGATT
TCATCGTAGAGTTCCATCACTTTTTGCTCCAGTTCATATACTTTTCTATCATTCTTTTGATCCTTCACAAGATCTTCAAGTGCTTTTAGCTCATCATCCTCTTCTTCAGC
CTTCTTGGCCTCTGATATTTCACAGTTCTTCTGCTCCAGCATCTCCTCGAGATCTTGTACCGCTAAAATCAACTCAGTATTCGATTCTTGCGTTTTCTGTAGCTAGCCCG
CAGATCCCCATGTTCAAACTGCAGTTTGTTTTTAACTTTTGCATCATCCATGTGCTTTTGAAAGCCCTTCAACTTCTCGCATTCTGCTCTCCATTCATCTCTCTCCGCTT
TCAAGCTAGAAACCTCACTCATAAGATCATGGCTTCTCTTATTCTCTTTCGCAATCTGTTTACGAAGCGTCTGCAACTCCATATCCGACATGTCTGCTCGTCTGCTCAAC
ACAGAAAGCTCATTCTTAAGTTCCTCATTCTCAATATCAGTTTCCTTTTTGGACCTTCCTCCTACAATGCCATTGACTCCCGAATCATCGGTTTGATCAGATTGAACCGA
CCACTTCCACGGGAATGCATGATTCTCTTCACGAGCAGCATCTTCCTGAATCCTCTGTATCCAAATCTGTACAGAACAAGAAACTTGAACACTAACATCTTTGAACAAAA
AAGTACCGACACAGAGATAGAGATAGAGAAACTAACATGCAAAACTGCAGAATTTGAATTGTGGAGGGGAAGAGAAGCAGAGAAAGGCTTGGTGGTTTCAGCATATTTAG
CAAAATCAATAGAAACTTCACCAAGTAAACCAGCTTTGGTCAATCCCTGA
Protein sequenceShow/hide protein sequence
MSIQVQFIKVAIAITNRGRGFERVRVAAAKERRLDSNNFSNSSRSLSDSFFADITLLSSSFLSIAILSYESVDLGFEHLDLLRERFRLRILQRKRSAHAVSLIAPEVDTA
PVYRKDHGFPVSISHNQAQAAPFVSLARPYLSYAARFHRRVPSLFAPVHILFYHSFDPSQDLQVLLAHHPLLQPSWPLIFHSSSAPASPRDLVPLKSTQYSILAFSVASP
QIPMFKLQFVFNFCIIHVLLKALQLLAFCSPFISLRFQARNLTHKIMASLILFRNLFTKRLQLHIRHVCSSAQHRKLILKFLILNISFLFGPSSYNAIDSRIIGLIRLNR
PLPRECMILFTSSIFLNPLYPNLYRTRNLNTNIFEQKSTDTEIEIEKLTCKTAEFELWRGREAEKGLVVSAYLAKSIETSPSKPALVNP