CuGenDBv2

Gene ID	CmoCh16G006580
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	DUF4228 domain-containing protein
Genome location	Cmo_Chr16:3250160..3250834
RNA-Seq Expression	CmoCh16G006580
Synteny	CmoCh16G006580
Gene Ontology terms	NA
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6577202.1 hypothetical protein SDJN03_24776, partial [Cucurbita argyrosperma subsp. sororia]

2.1e-117

98.66

Show/hide

Query:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR
        MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMG+IRAREGHVR
Subjt:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR

Query:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
        SNSVPEAT AAAAG+APYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
Subjt:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH

Query:  WSLSSTTANATPSASSKSGGLPEI
        WSLSSTTANATPSASSKSGGLPEI
Subjt:  WSLSSTTANATPSASSKSGGLPEI

XP_022931324.1 uncharacterized protein LOC111437546 [Cucurbita moschata]

8.6e-119

100

Show/hide

Query:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR
        MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR
Subjt:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR

Query:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
        SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
Subjt:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH

Query:  WSLSSTTANATPSASSKSGGLPEI
        WSLSSTTANATPSASSKSGGLPEI
Subjt:  WSLSSTTANATPSASSKSGGLPEI

XP_022985129.1 uncharacterized protein LOC111483212 [Cucurbita maxima]

7.8e-112

97.32

Show/hide

Query:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR
        MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKS DLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR
Subjt:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR

Query:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
        SNSVPEAT AAAAGMA YRMSFDYQGVLRRSQTEVFSRSSEKN GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
Subjt:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH

Query:  WSLSSTTANATPSASSKSGGLPEI
        WSLSSTTANATPSAS+KSGGL EI
Subjt:  WSLSSTTANATPSASSKSGGLPEI

XP_023552343.1 uncharacterized protein LOC111810037 [Cucurbita pepo subsp. pepo]

9.9e-115

98.21

Show/hide

Query:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR
        MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKS DLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMG+IRAREGHVR
Subjt:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR

Query:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
        SNSVPEAT AAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
Subjt:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH

Query:  WSLSSTTANATPSASSKSGGLPEI
        WSLSSTTANATPSASSKSGGL EI
Subjt:  WSLSSTTANATPSASSKSGGLPEI

XP_038902281.1 uncharacterized protein LOC120088913 [Benincasa hispida]

5.2e-108

94.64

Show/hide

Query:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR
        MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKS DLFWNPLPHNEELLPGKSYYLL RNRGRNRGE EEGEMG+IRAREGHVR
Subjt:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR

Query:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
        SNSVPE  AAAAA MAPYRMSFDYQGVLRRSQTEVFSR SEKN GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSD 
Subjt:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH

Query:  WSLSSTTANATPSASSKSGGLPEI
        WSLS+TTANATPSASSKSGGL EI
Subjt:  WSLSSTTANATPSASSKSGGLPEI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUU6 Uncharacterized protein

4.2e-103

91.07

Show/hide

Query:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR
        MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKS DLFWNPLPHNEELLPGKSYYLL RNRGRNRG  +  EMG+IRAREGHVR
Subjt:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR

Query:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
        SNSVPEA AAA A MAPYRMSFDYQGVLRRSQTEVFSR SEKN GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSD 
Subjt:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH

Query:  WSLSSTTANATPSASSKSGGLPEI
        WSLS+ TANATPS SSKSGGL EI
Subjt:  WSLSSTTANATPSASSKSGGLPEI

A0A1S3BSZ8 uncharacterized protein LOC103493172

5.5e-103

90.62

Show/hide

Query:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR
        MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKS DLFWNPLPHNEELLPGKSYYLL RNRGRNRG  +  EMG+IRAREGHVR
Subjt:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR

Query:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
        SNSVPEA AAA A MAPYRMSFDYQGVLRRSQTEVFSR SEKN GGVWKVKLVISP+RLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSD 
Subjt:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH

Query:  WSLSSTTANATPSASSKSGGLPEI
        WSLS+ TANATPS SSKSGGL EI
Subjt:  WSLSSTTANATPSASSKSGGLPEI

A0A5D3D1S5 DUF4228 domain-containing protein

5.5e-103

90.62

Show/hide

Query:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR
        MGNCLF GG+GEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKS DLFWNPLPHNEELLPGKSYYLL RNRGRNRG  +  EMG+IRAREGHVR
Subjt:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR

Query:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
        SNSVPEA AAA A MAPYRMSFDYQGVLRRSQTEVFSR SEKN GGVWKVKLVISP+RLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSD 
Subjt:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH

Query:  WSLSSTTANATPSASSKSGGLPEI
        WSLS+ TANATPS SSKSGGL EI
Subjt:  WSLSSTTANATPSASSKSGGLPEI

A0A6J1ETY6 uncharacterized protein LOC111437546

4.2e-119

100

Show/hide

Query:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR
        MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR
Subjt:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR

Query:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
        SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
Subjt:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH

Query:  WSLSSTTANATPSASSKSGGLPEI
        WSLSSTTANATPSASSKSGGLPEI
Subjt:  WSLSSTTANATPSASSKSGGLPEI

A0A6J1JCF7 uncharacterized protein LOC111483212

3.8e-112

97.32

Show/hide

Query:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR
        MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKS DLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR
Subjt:  MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVR

Query:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
        SNSVPEAT AAAAGMA YRMSFDYQGVLRRSQTEVFSRSSEKN GGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH
Subjt:  SNSVPEATAAAAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDH

Query:  WSLSSTTANATPSASSKSGGLPEI
        WSLSSTTANATPSAS+KSGGL EI
Subjt:  WSLSSTTANATPSASSKSGGLPEI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G64700.1 unknown protein

5.9e-33

43.81

Show/hide

Query:  MGNCLFGG-GSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHV
        MGNCLFGG G  E    IKVI S+GG++E  SP+T G ++  F G+ +F + DL W PL H+  L+PG+SYYL   N   +  +T  G          HV
Subjt:  MGNCLFGG-GSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHV

Query:  RSNSVPEATAAAAAGMAPYRMSFDY-QGVLRRSQTEVFSRSSE---------------KNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCG
        RSNS       + + + PYRMS DY   VL+RS T+VFSR+S                 + G +WKV L+I+ + L++IL E+G T ELIESVR VAK G
Subjt:  RSNSVPEATAAAAAGMAPYRMSFDY-QGVLRRSQTEVFSRSSE---------------KNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCG

Query:  STSTSSSFSS
         TS+ +S SS
Subjt:  STSTSSSFSS

AT3G61920.1 unknown protein

1.9e-23

39.19

Show/hide

Query:  MGNCLF--GGGSGEIQGK----IKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWN--PLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMI
        MGNC+F   GGS ++  K    IKV+T NGG+MEL  PI    I +EFPG+ I  S  L  +  PL H EEL PG  YYLL                   
Subjt:  MGNCLF--GGGSGEIQGK----IKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWN--PLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMI

Query:  RAREGHVRSNSVPEATAAAAAGM--------APYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGS
                    P +++AAA            PYRMSF         +T + +  S   G GVWKV+LVISP++L EIL E+  T+ L+ESVRTVAKCG 
Subjt:  RAREGHVRSNSVPEATAAAAAGM--------APYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGS

Query:  TSTSSSFSSSMAFSDHWSLSST
                 S A SD  S++S+
Subjt:  TSTSSSFSSSMAFSDHWSLSST

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGAACTGCTTATTCGGCGGTGGGTCTGGTGAGATTCAGGGGAAAATCAAGGTAATCACGTCCAATGGCGGGATTATGGAGTTGGGTTCTCCGATTACCGTCGGGTG
CATCGCCGATGAGTTTCCTGGCTATGGAATATTCAAAAGCCAAGATCTTTTTTGGAACCCATTACCGCACAACGAGGAGCTGCTTCCGGGGAAATCCTACTACTTGCTTC
AGAGAAACAGGGGAAGAAACAGAGGAGAGACAGAAGAAGGGGAAATGGGAATGATAAGGGCGCGTGAGGGGCACGTGAGGTCGAATAGTGTACCGGAGGCGACGGCGGCG
GCGGCGGCGGGTATGGCGCCGTACAGAATGTCGTTTGATTATCAGGGGGTTTTGAGGAGGTCGCAGACGGAGGTTTTTTCGAGGAGCAGTGAGAAGAACGGCGGGGGGGT
TTGGAAGGTGAAATTGGTGATTAGTCCGAAGCGATTGGTGGAGATTTTGGAGGAGGAAGGTCACACTCAGGAGTTGATTGAGAGCGTAAGGACTGTGGCTAAATGTGGAA
GTACTAGCACCAGCAGCAGCTTTTCGTCGTCCATGGCGTTTTCCGATCACTGGAGTTTGTCCTCCACCACCGCCAATGCTACTCCGAGCGCTTCCTCCAAAAGTGGCGGC
TTGCCGGAGATCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSQDLFWNPLPHNEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVRSNSVPEATAA
AAAGMAPYRMSFDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGSTSTSSSFSSSMAFSDHWSLSSTTANATPSASSKSGG
LPEI

CmoCh16G006580 (gene) of Cucurbita moschata (Rifu) v1 genome