CuGenDBv2

Gene ID	CmoCh16G006840
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Genome location	Cmo_Chr16:3383288..3383974
RNA-Seq Expression	CmoCh16G006840
Synteny	CmoCh16G006840
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0016740 - transferase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6577225.1 hypothetical protein SDJN03_24799, partial [Cucurbita argyrosperma subsp. sororia]

6.3e-117

99.12

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Query:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI
        MDFFFFDKAEKVSSSVPRCNLLQLFAKFFR IEFCFLLVF+SWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI
Subjt:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI

Query:  YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF
        YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF
Subjt:  YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF

Query:  QKKIEAFIAKEKKFRREESCAIVLRCDG
        QKKIEAFIAKEKKFRREESCAIVLRCDG
Subjt:  QKKIEAFIAKEKKFRREESCAIVLRCDG

KAG7015317.1 hypothetical protein SDJN02_22952, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-116

98.68

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Query:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI
        MDFFFFDKAEKVSSSVPRCNLLQLFAKFFR IEFCFLLVF+SWTLSRLPIAVRISSEYFGK+LGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI
Subjt:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI

Query:  YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF
        YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF
Subjt:  YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF

Query:  QKKIEAFIAKEKKFRREESCAIVLRCDG
        QKKIEAFIAKEKKFRREESCAIVLRCDG
Subjt:  QKKIEAFIAKEKKFRREESCAIVLRCDG

XP_022929278.1 uncharacterized protein LOC111435910 [Cucurbita moschata]

1.3e-117

100

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Query:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI
        MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI
Subjt:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI

Query:  YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF
        YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF
Subjt:  YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF

Query:  QKKIEAFIAKEKKFRREESCAIVLRCDG
        QKKIEAFIAKEKKFRREESCAIVLRCDG
Subjt:  QKKIEAFIAKEKKFRREESCAIVLRCDG

XP_022985131.1 uncharacterized protein LOC111483214 [Cucurbita maxima]

1.8e-111

97.75

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Query:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI
        MDFFFFDKAEKVSSSVPRCNLLQLFAKFFR +EFCFLLVFLSWTLSRLPIAVRIS EYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI
Subjt:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI

Query:  YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF
        YENLIEKSGS DLPDSLAERDSSIAE+VEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF
Subjt:  YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF

Query:  QKKIEAFIAKEKKFRREESCAI
        QKKIEAFIAKEKKFRREESCAI
Subjt:  QKKIEAFIAKEKKFRREESCAI

XP_023552883.1 uncharacterized protein LOC111810408 [Cucurbita pepo subsp. pepo]

1.2e-115

98.25

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Query:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI
        MDFFFFDKAEKVSSSVPRCNLLQLFAKFFR IEFCFLLVFLSWT SRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSG+SAETERI
Subjt:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI

Query:  YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF
        YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNE+F
Subjt:  YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF

Query:  QKKIEAFIAKEKKFRREESCAIVLRCDG
        QKKIEAFIAKEKKFRREESCAIVLRCDG
Subjt:  QKKIEAFIAKEKKFRREESCAIVLRCDG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BT40 uncharacterized protein LOC103493205

1.7e-75

66.8

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Query:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFS--GHSAETE
        MDFFFFDKAEK+S+ +PRCNLLQ+F+KFFR +E  FLL+ LSW  SRLPIA+RIS++YF KL  FIA+PLFGFLLCNAIIVALVAKPSQFS    S +T+
Subjt:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFS--GHSAETE

Query:  RIYENLIEKSGS-RDLPDSLAERDSSIAEEVEIVYQDKQII---------------------VESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSET
        RIYE+LIEK+G+  DL DS +E      E  EIVYQDK+II                     +ES+S + H KVILRSLSEKL RECV TQSEKLRRSET
Subjt:  RIYENLIEKSGS-RDLPDSLAERDSSIAEEVEIVYQDKQII---------------------VESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSET

Query:  EKCRNLEHSHDILFFQEDLSNEEFQKKIEAFIAKEKKFRREESCAI-VLRCDG
        EKCRNLE+S+DIL++Q+DLS+EEFQ+KIEAFIAKEKKFRREES AI VL CDG
Subjt:  EKCRNLEHSHDILFFQEDLSNEEFQKKIEAFIAKEKKFRREESCAI-VLRCDG

A0A5A7TU70 Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6

7.6e-76

66.8

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Query:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFS--GHSAETE
        MDFFFFDKAEK+S+ +PRCNLLQ+F+KFFR++E  FLL+ LSW  SRLPIA+RIS++YF KL  FIA+PLFGFLLCNAIIVALVAKPSQFS    S +T+
Subjt:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFS--GHSAETE

Query:  RIYENLIEKSGS-RDLPDSLAERDSSIAEEVEIVYQDKQII---------------------VESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSET
        RIYE+LIE +G+  DL DS +E      E  EIVYQDK+II                     +ES+S +DH KVILRSLSEKL RECV TQSEKLRRSET
Subjt:  RIYENLIEKSGS-RDLPDSLAERDSSIAEEVEIVYQDKQII---------------------VESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSET

Query:  EKCRNLEHSHDILFFQEDLSNEEFQKKIEAFIAKEKKFRREESCAI-VLRCDG
        EKCRNLE+S+DIL++Q+DLS+EEFQ+KIEAFIAKEKKFRREES AI VL CDG
Subjt:  EKCRNLEHSHDILFFQEDLSNEEFQKKIEAFIAKEKKFRREESCAI-VLRCDG

A0A5D3CYU3 Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6

1.7e-75

66.8

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Query:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFS--GHSAETE
        MDFFFFDKAEK+S+ +PRCNLLQ+F+KFFR +E  FLL+ LSW  SRLPIA+RIS++YF KL  FIA+PLFGFLLCNAIIVALVAKPSQFS    S +T+
Subjt:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFS--GHSAETE

Query:  RIYENLIEKSGS-RDLPDSLAERDSSIAEEVEIVYQDKQII---------------------VESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSET
        RIYE+LIEK+G+  DL DS +E      E  EIVYQDK+II                     +ES+S + H KVILRSLSEKL RECV TQSEKLRRSET
Subjt:  RIYENLIEKSGS-RDLPDSLAERDSSIAEEVEIVYQDKQII---------------------VESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSET

Query:  EKCRNLEHSHDILFFQEDLSNEEFQKKIEAFIAKEKKFRREESCAI-VLRCDG
        EKCRNLE+S+DIL++Q+DLS+EEFQ+KIEAFIAKEKKFRREES AI VL CDG
Subjt:  EKCRNLEHSHDILFFQEDLSNEEFQKKIEAFIAKEKKFRREESCAI-VLRCDG

A0A6J1ERL9 uncharacterized protein LOC111435910

6.1e-118

100

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Query:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI
        MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI
Subjt:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI

Query:  YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF
        YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF
Subjt:  YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF

Query:  QKKIEAFIAKEKKFRREESCAIVLRCDG
        QKKIEAFIAKEKKFRREESCAIVLRCDG
Subjt:  QKKIEAFIAKEKKFRREESCAIVLRCDG

A0A6J1J794 uncharacterized protein LOC111483214

8.6e-112

97.75

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Query:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI
        MDFFFFDKAEKVSSSVPRCNLLQLFAKFFR +EFCFLLVFLSWTLSRLPIAVRIS EYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI
Subjt:  MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERI

Query:  YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF
        YENLIEKSGS DLPDSLAERDSSIAE+VEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF
Subjt:  YENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEF

Query:  QKKIEAFIAKEKKFRREESCAI
        QKKIEAFIAKEKKFRREESCAI
Subjt:  QKKIEAFIAKEKKFRREESCAI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G34560.1 unknown protein

9.7e-07

26.72

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Query:  KAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGH--------SAETER
        K EK S  +     ++ F   FRL E   L++ +S  LS  P +V+IS + F +   F+ SP F F + NAI++ L+AK  ++S           A +  
Subjt:  KAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGH--------SAETER

Query:  IYENLIEKSGSRDLPDSLAERDSSIAEE---VEIVYQDKQIIVESESV-----VDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFF
        +Y+  + KS  +  P   A +   + +      + +   Q     E+V      +  K + R +SEK  R C + +   +R  + E              
Subjt:  IYENLIEKSGSRDLPDSLAERDSSIAEE---VEIVYQDKQIIVESESV-----VDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFF

Query:  QEDLSNEEFQKKIEAFIAKEKKFRREESCAIV
         + +SNE+F+ KIEAFIA++K+ +++E   I+
Subjt:  QEDLSNEEFQKKIEAFIAKEKKFRREESCAIV

AT5G66440.1 unknown protein

2.1e-25

38.37

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Query:  MDFFFFD--KAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQ---FSGHSA
        MD F FD  KAEK + ++ R N      +FFR  E C  L+F+ WT S+LP  V+IS  +  ++   I++PLF FLL N+I+V L+ K S     +  SA
Subjt:  MDFFFFD--KAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQ---FSGHSA

Query:  ETERIYENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIV--------------------ESESVVDHPKVILRSLSE----KLTRECVTTQSEKL
        ETE IY+  +    +R  P      D  + E   IVY DKQ+IV                    +S+S   H KV  RS S+    + +   +      L
Subjt:  ETERIYENLIEKSGSRDLPDSLAERDSSIAEEVEIVYQDKQIIV--------------------ESESVVDHPKVILRSLSE----KLTRECVTTQSEKL

Query:  RRSETEK-CRNLEHSHDI----LFFQEDLSNEEFQKKIEAFIAKEKKFRREESCAIVL
        +RSETEK C+  E+  D      + ++DLSNEEFQK IEAFIAK++ FRR+ES A+V+
Subjt:  RRSETEK-CRNLEHSHDI----LFFQEDLSNEEFQKKIEAFIAKEKKFRREESCAIVL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATTTCTTCTTCTTCGACAAAGCAGAGAAGGTTTCAAGCTCTGTTCCGAGATGCAATCTCCTCCAACTCTTCGCCAAGTTCTTCCGTTTAATCGAGTTCTGCTTTCT
ACTGGTTTTCCTCTCCTGGACTCTCTCTAGGCTTCCGATCGCCGTCAGAATCTCCAGCGAGTATTTCGGAAAACTCCTCGGCTTCATCGCGAGTCCTCTCTTCGGATTCC
TCCTCTGTAACGCCATCATCGTCGCACTCGTAGCAAAACCTAGCCAATTCTCAGGCCACAGCGCTGAAACCGAACGGATTTACGAAAACCTAATTGAAAAATCCGGAAGT
CGCGACCTACCTGATTCGCTCGCGGAACGCGATTCTTCAATCGCAGAGGAGGTGGAGATTGTGTACCAGGATAAACAGATCATCGTGGAGTCGGAATCAGTAGTAGATCA
TCCGAAAGTGATTTTGAGGAGTTTATCGGAGAAACTTACGCGAGAATGCGTGACGACACAGAGTGAGAAGCTTCGGCGATCGGAGACGGAGAAGTGCCGGAATCTGGAGC
ATTCGCACGACATTTTGTTCTTCCAGGAAGATTTGAGTAATGAAGAATTTCAGAAGAAGATTGAAGCGTTCATTGCGAAAGAGAAGAAGTTTCGTCGGGAAGAATCTTGC
GCCATTGTACTCCGCTGCGACGGTTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MDFFFFDKAEKVSSSVPRCNLLQLFAKFFRLIEFCFLLVFLSWTLSRLPIAVRISSEYFGKLLGFIASPLFGFLLCNAIIVALVAKPSQFSGHSAETERIYENLIEKSGS
RDLPDSLAERDSSIAEEVEIVYQDKQIIVESESVVDHPKVILRSLSEKLTRECVTTQSEKLRRSETEKCRNLEHSHDILFFQEDLSNEEFQKKIEAFIAKEKKFRREESC
AIVLRCDG

CmoCh16G006840 (gene) of Cucurbita moschata (Rifu) v1 genome