CuGenDBv2

Gene ID	CmoCh16G007110
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	EXPERA domain-containing protein
Genome location	Cmo_Chr16:3548455..3549925
RNA-Seq Expression	CmoCh16G007110
Synteny	CmoCh16G007110
Gene Ontology terms	GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR016964 - Sigma intracellular receptor 2 IPR033118 - EXPERA domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577250.1 Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-78

92.26

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
        MGVLLKLFDSVLFV  FVHAMAPPLI AQLLLPGALFPDVL+DFKE+Y+RLSGDYLMAE PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY

Query:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV
        GVSLFSAM AIAAELIGSQRASG+LLKLYLPFLGLGVLATLRGL+PRCSKAT TG  VGPSIAGKKKV
Subjt:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV

XP_022929300.1 sigma intracellular receptor 2-like [Cucurbita moschata]

2.1e-85

100

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
        MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY

Query:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV
        GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV
Subjt:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV

XP_022985078.1 sigma intracellular receptor 2-like [Cucurbita maxima]

4.0e-84

98.81

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
        MGVLLKLFDSVLFV LFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY

Query:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV
        GVSLF+AMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV
Subjt:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV

XP_023553153.1 sigma intracellular receptor 2-like [Cucurbita pepo subsp. pepo]

2.9e-79

92.86

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
        MGVLLKLFDSVLFV  FVHAMAPPLIGAQLLLPGALFPDVL+DFKE+Y+RLSGDYLMAE PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY

Query:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV
        GVSLFSAM AIAAELIGSQRASG+LLKLYLPFLGLGVLATLRGL+PRCSKAT TG  VGPSIAGKKKV
Subjt:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV

XP_038876784.1 sigma intracellular receptor 2-like [Benincasa hispida]

3.4e-67

80.24

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
        MG LLKLFDS+LFV   VHA+APPLIGAQLLLP  LFPD+L+ FK LY+  SGDYLMAEAPPFF+GLLWLELLLQWPLT+ NLYAI AAK WLHTTCLIY
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY

Query:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK
        GVSLFSAM AIAAEL+GSQ+ASG+LL +YLPFLGLGV ATLRGL+PRCSKAT  GH  GPSIA KKK
Subjt:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZE5 EXPERA domain-containing protein

2.4e-63

76.65

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
        MG +LKLFDSVLFVF  VHA+APPLI AQLLLP  LFP++ +  K  Y+  SGDYLMA+ PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIY
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY

Query:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK
        GVSLFSAM AIAAELIGSQRASG+LL +Y PFL +GVLA LRGLLPRC+KAT TGH  GPSIA KKK
Subjt:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK

A0A1S3BWY8 transmembrane protein 97-like

6.4e-64

78.44

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
        MG  LKLF+SVLFVF  VHA+APPLIGAQLLLP  LFPD+L+ FK  Y+  SGDYLMAE PPFF+GLLWLELLLQWPLT+ NLYAI  AKSWLHTTCLIY
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY

Query:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK
        GVSLFSAM AIAAELIGSQRASG+LL +Y PFL LGV A LRGLLP C KAT TGH  GPSIA KKK
Subjt:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK

A0A5D3CY30 Transmembrane protein 97-like

6.4e-64

78.44

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
        MG  LKLF+SVLFVF  VHA+APPLIGAQLLLP  LFPD+L+ FK  Y+  SGDYLMAE PPFF+GLLWLELLLQWPLT+ NLYAI  AKSWLHTTCLIY
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY

Query:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK
        GVSLFSAM AIAAELIGSQRASG+LL +Y PFL LGV A LRGLLP C KAT TGH  GPSIA KKK
Subjt:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK

A0A6J1EU13 sigma intracellular receptor 2-like

1.0e-85

100

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
        MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY

Query:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV
        GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV
Subjt:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV

A0A6J1JCI5 sigma intracellular receptor 2-like

1.9e-84

98.81

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
        MGVLLKLFDSVLFV LFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY

Query:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV
        GVSLF+AMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV
Subjt:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV

SwissProt top hits

e value

%identity

Alignment

Q6DFQ5 Sigma intracellular receptor 2

6.9e-07

25.97

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIW-AAKSWLHTTCLI
        M V  +L + + F + F H     L+  Q +LP +L+P  L+D  + Y     D+LMA  PP+F   ++ E +LQ P      YA +     W+    ++
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIW-AAKSWLHTTCLI

Query:  YGVSLFSAMVAIAAELIG------------SQRASGLLLKLYLPFLGLGVLATL
        Y   + + ++AI   ++             +Q+    L+ +Y P+L + VL  L
Subjt:  YGVSLFSAMVAIAAELIG------------SQRASGLLLKLYLPFLGLGVLATL

Arabidopsis top hits

e value

%identity

Alignment

AT1G05210.1 Transmembrane protein 97, predicted

1.2e-35

51.32

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
        MG L KL D  LFV+    A+  PLI  Q  LP  ++P  L D K  Y+   GDYL+ E P F VGL+W ELL  WPL++ N+YAI A KSW  TTCL+Y
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY

Query:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKAT
        G SL ++M AI  ++IGS +AS  LL +Y+PF+G G+LA LRGL+ R +K T
Subjt:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKAT

AT1G05220.1 Transmembrane protein 97, predicted

1.5e-28

45.33

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
        MG L KL +  LF F  + A+  PL+  Q+L PG ++P +L D K+ Y     DYL  E P FFVGL+W E++   PL++ N+YAI  +KSW  TT L+Y
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY

Query:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSK
        G S  ++M AI  ++IGS++ +  LL  YLPF+GL +LA LRGL+   +K
Subjt:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSK

AT1G05220.2 Transmembrane protein 97, predicted

1.5e-28

45.33

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
        MG L KL +  LF F  + A+  PL+  Q+L PG ++P +L D K+ Y     DYL  E P FFVGL+W E++   PL++ N+YAI  +KSW  TT L+Y
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY

Query:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSK
        G S  ++M AI  ++IGS++ +  LL  YLPF+GL +LA LRGL+   +K
Subjt:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSK

AT2G32380.1 Transmembrane protein 97, predicted

3.3e-36

48.52

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Query:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY
        MG   KL D+VLF++  + A+  PLI  Q  LPG +FP  +VD    Y+   GDYL+ E P F VGL+W ELLL WPL++ N+YAI A KSW  TT ++Y
Subjt:  MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIY

Query:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVG--PSIAGKKK
        G S+ ++M AI  E+IGS +AS  LL +Y+PF+G+G+LA LRGLL   S++  +G  VG  P+I  ++K
Subjt:  GVSLFSAMVAIAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVG--PSIAGKKK

Sequences

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CDS sequence

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ATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTTCTTATTTGTACATGCCATGGCGCCGCCGCTCATCGGCGCCCAGTTATTGCTCCCCGGAGCCCTTTT
CCCCGATGTTCTTGTTGATTTCAAGGAGCTGTACGTTCGACTGTCGGGAGACTATCTGATGGCCGAGGCGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCC
TTCAATGGCCGCTCACGGTTTTCAACCTCTACGCCATCTGGGCTGCAAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCTCTGCTATGGTTGCT
ATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGACTGCTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTGGCCACGCTACGTGGGCTGCTGCCGCG
TTGCAGCAAGGCTACGCCCACCGGCCACGACGTTGGACCATCAATTGCCGGGAAAAAGAAGGTTTGA

mRNA sequence

Show/hide mRNA sequence

GTGAAGCAATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTTCTTATTTGTACATGCCATGGCGCCGCCGCTCATCGGCGCCCAGTTATTGCTCCCCGGA
GCCCTTTTCCCCGATGTTCTTGTTGATTTCAAGGAGCTGTACGTTCGACTGTCGGGAGACTATCTGATGGCCGAGGCGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGA
GCTTCTCCTTCAATGGCCGCTCACGGTTTTCAACCTCTACGCCATCTGGGCTGCAAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCTCTGCTA
TGGTTGCTATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGACTGCTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTGGCCACGCTACGTGGGCTG
CTGCCGCGTTGCAGCAAGGCTACGCCCACCGGCCACGACGTTGGACCATCAATTGCCGGGAAAAAGAAGGTTTGAAGCAAAGATATGGCATCTCGTGTCGCCATTTTGTT
CTTTCAACTATCTGCGTATATTTTCGAAAGATTTAAGCGACCACGAATAAAATTGAACAAGTGATTGTTGGATGATAAAAGTCCTACATCAACTAATTTAGAGAATAATC
ATAAGTATAATAATCAAGGAATACTCTATTAGCATGTGGCCTTTTAAGAAGCTCAAAGCCAAGCCATGAGAGCTTAAACTCAAAGTGGATAATATCATACCATTATAGTG
AGTCGTGTTCATCTAACAAAAAAACAGGGCTATAAATTGGGTGGTCGAGTCGGTTTTGGGCCATAAGTTCAATCTATGTGAGGAATATAGTCTCACATGATGATGTAATA
GTCCAAATCCACCACTAAGC

Protein sequence

Show/hide protein sequence

MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVA
IAAELIGSQRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV

CmoCh16G007110 (gene) of Cucurbita moschata (Rifu) v1 genome