; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G007570 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G007570
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpolyadenylate-binding protein 2-like
Genome locationCmo_Chr16:3792757..3795889
RNA-Seq ExpressionCmoCh16G007570
SyntenyCmoCh16G007570
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53209.1 hypothetical protein Csa_014786 [Cucumis sativus]1.0e-10896.7Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEM+GDVDMS  DDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS SQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEA+AVQEAL+LNESELHGRQLKVLPKRTNVPGMKQYR RRYNPYVGFRRPYAPPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP

Query:  RFRRSMRYMPYY
        RFRRSMRYMPYY
Subjt:  RFRRSMRYMPYY

XP_004146877.1 polyadenylate-binding protein 2 [Cucumis sativus]1.0e-10896.7Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEM+GDVDMS  DDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS SQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEA+AVQEAL+LNESELHGRQLKVLPKRTNVPGMKQYR RRYNPYVGFRRPYAPPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP

Query:  RFRRSMRYMPYY
        RFRRSMRYMPYY
Subjt:  RFRRSMRYMPYY

XP_022136947.1 polyadenylate-binding protein 2-like isoform X1 [Momordica charantia]4.5e-10996.7Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEMDGDVDMS  DDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS SQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEA+AVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPY+GFRRPY PPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP

Query:  RFRRSMRYMPYY
        RFRR MRYMPYY
Subjt:  RFRRSMRYMPYY

XP_022929268.1 polyadenylate-binding protein 2-like [Cucurbita moschata]1.9e-112100Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP

Query:  RFRRSMRYMPYY
        RFRRSMRYMPYY
Subjt:  RFRRSMRYMPYY

XP_038884177.1 polyadenylate-binding protein 2 isoform X1 [Benincasa hispida]9.0e-11097.64Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEMDGDVDMS ADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS  QAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEA+AVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPY+GFRRPYAPPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP

Query:  RFRRSMRYMPYY
        RFRRSMRYMPYY
Subjt:  RFRRSMRYMPYY

TrEMBL top hitse value%identityAlignment
A0A0A0KWF2 RRM domain-containing protein4.8e-10996.7Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEM+GDVDMS  DDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS SQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEA+AVQEAL+LNESELHGRQLKVLPKRTNVPGMKQYR RRYNPYVGFRRPYAPPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP

Query:  RFRRSMRYMPYY
        RFRRSMRYMPYY
Subjt:  RFRRSMRYMPYY

A0A5D3D298 Polyadenylate-binding protein 2 isoform X11.4e-10896.23Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEM+GDVDMS  DDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS  QAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEA+AVQEAL+LNESELHGRQLKVLPKRTNVPGMKQYR RRYNPYVGFRRPYAPPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP

Query:  RFRRSMRYMPYY
        RFRRSMRYMPYY
Subjt:  RFRRSMRYMPYY

A0A6J1C6V0 polyadenylate-binding protein 2-like isoform X12.2e-10996.7Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEMDGDVDMS  DDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS SQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEA+AVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPY+GFRRPY PPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP

Query:  RFRRSMRYMPYY
        RFRR MRYMPYY
Subjt:  RFRRSMRYMPYY

A0A6J1EN98 polyadenylate-binding protein 2-like9.4e-113100Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP

Query:  RFRRSMRYMPYY
        RFRRSMRYMPYY
Subjt:  RFRRSMRYMPYY

A0A6J1JCD2 polyadenylate-binding protein 2-like9.4e-113100Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMP

Query:  RFRRSMRYMPYY
        RFRRSMRYMPYY
Subjt:  RFRRSMRYMPYY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 22.9e-3457.24Show/hide
Query:  VADDDAV----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF
        ++D DA+    KEL EMK+R+ EME EAA LR MQ +++ E  A+++          KE  D++SV+VGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF
Subjt:  VADDDAV----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF

Query:  -GQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPR
         G PKGFAY+EF E   V  ALLLN S LH R LKV PKRTNVPGM + R R
Subjt:  -GQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPR

Q93VI4 Polyadenylate-binding protein 14.7e-6965.2Show/hide
Query:  EEEEHEVYGGEIP--VEGEMD--------GDVDMSVADDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSR
        +E+EHEVYGGEIP   EGEMD        G+   +  D++     + ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G   S A KEE DSR
Subjt:  EEEEHEVYGGEIP--VEGEMD--------GDVDMSVADDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQY--RPRRYNPYVGFRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ +L+LNESELHGRQ+KV  KRTNVPGM+Q+  R R + P  GF  P
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQY--RPRRYNPYVGFRRP

Query:  YAPPYFYSPYGYGKMPRFRRSMRYMPY
          P  FY PY YG++PRFRR MRY PY
Subjt:  YAPPYFYSPYGYGKMPRFRRSMRYMPY

Q9DDY9 Polyadenylate-binding protein 2-A6.7e-3143.36Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS---TSQAGKEETDSRSVFVGNVDYAC
        +EE E E    E P  GE+ G  D ++ D     EL+ +K R++EMEEEA  L+E+Q +VEK+M     P        S   K E D+RS++VGNVDY  
Subjt:  MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS---TSQAGKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMK---------QYRPR--RYNPYVGFRRPY
        T EE++ HF  CG+VNRVTIL DKF G PKGFAY+EF + ++V+ +L L+ES   GRQ+KV+PKRTN PG+          +YR R   Y+    F   Y
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMK---------QYRPR--RYNPYVGFRRPY

Query:  APPYFYSPYGYGKMPRFRRSMRYMPY
         P     P G     R R +  Y PY
Subjt:  APPYFYSPYGYGKMPRFRRSMRYMPY

Q9FJN9 Polyadenylate-binding protein 25.2e-9281.36Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDG-------DVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNV
        MEEEEHEVYGGEIP  GEMDG       D+DM+ ADDDAVKELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  + +QAGKEE D+RSVFVGNV
Subjt:  MEEEEHEVYGGEIPVEGEMDG-------DVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNV

Query:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVG--FRRPYAPPYFY
        DYACTPEEVQQHFQ+CGTV+RVTILTDKFGQPKGFAYVEF+E +AVQEAL LNESELHGRQLKVL KRTNVPG+KQ+R RR+NPY+G  FRRP+  PY Y
Subjt:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVG--FRRPYAPPYFY

Query:  SPYGYGKMPRFRRSMRYMPY
        SPYGYGK PRFRR MRYMPY
Subjt:  SPYGYGKMPRFRRSMRYMPY

Q9LX90 Polyadenylate-binding protein 34.8e-9080.09Show/hide
Query:  MEEEEHEVYGGEIPVEGEM---DGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYAC
        MEEEEHEVYGGEIP  G+    D D+DMS AD+DAV EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  + +Q GKEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIPVEGEM---DGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVG--FRRPYAPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E +AVQEAL LNESELHGRQLKV PKRTNVPGMKQY P R+NP +G  FRRP+ PPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVG--FRRPYAPPYFYSPYG

Query:  YGKMPRFRRSMRYMPY
        YGK PRFRR MRYMPY
Subjt:  YGKMPRFRRSMRYMPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-9180.09Show/hide
Query:  MEEEEHEVYGGEIPVEGEM---DGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYAC
        MEEEEHEVYGGEIP  G+    D D+DMS AD+DAV EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  + +Q GKEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIPVEGEM---DGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVG--FRRPYAPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E +AVQEAL LNESELHGRQLKV PKRTNVPGMKQY P R+NP +G  FRRP+ PPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVG--FRRPYAPPYFYSPYG

Query:  YGKMPRFRRSMRYMPY
        YGK PRFRR MRYMPY
Subjt:  YGKMPRFRRSMRYMPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.0e-8479.7Show/hide
Query:  MEEEEHEVYGGEIPVEGEM---DGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYAC
        MEEEEHEVYGGEIP  G+    D D+DMS AD+DAV EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  + +Q GKEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIPVEGEM---DGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVG--FRRPYAPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E +AVQEAL LNESELHGRQLKV PKRTNVPGMKQY P R+NP +G  FRRP+ PPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVG--FRRPYAPPYFYSPYG

Query:  YG
        YG
Subjt:  YG

AT5G51120.1 polyadenylate-binding protein 13.3e-7065.2Show/hide
Query:  EEEEHEVYGGEIP--VEGEMD--------GDVDMSVADDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSR
        +E+EHEVYGGEIP   EGEMD        G+   +  D++     + ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G   S A KEE DSR
Subjt:  EEEEHEVYGGEIP--VEGEMD--------GDVDMSVADDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQY--RPRRYNPYVGFRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ +L+LNESELHGRQ+KV  KRTNVPGM+Q+  R R + P  GF  P
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQY--RPRRYNPYVGFRRP

Query:  YAPPYFYSPYGYGKMPRFRRSMRYMPY
          P  FY PY YG++PRFRR MRY PY
Subjt:  YAPPYFYSPYGYGKMPRFRRSMRYMPY

AT5G51120.2 polyadenylate-binding protein 11.4e-6354.92Show/hide
Query:  EEEEHEVYGGEIP--VEGEMD--------GDVDMSVADDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------
        +E+EHEVYGGEIP   EGEMD        G+   +  D++     + ++L++MKKR+KE+EEEA ALREMQAK EK+MGA Q                  
Subjt:  EEEEHEVYGGEIP--VEGEMD--------GDVDMSVADDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------

Query:  -------------------DPAGTSTSQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESE
                           +   +  S A KEE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E +AVQ +L+LNESE
Subjt:  -------------------DPAGTSTSQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESE

Query:  LHGRQLKVLPKRTNVPGMKQY--RPRRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPY
        LHGRQ+KV  KRTNVPGM+Q+  R R + P  GF  P  P  FY PY YG++PRFRR MRY PY
Subjt:  LHGRQLKVLPKRTNVPGMKQY--RPRRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.7e-9381.36Show/hide
Query:  MEEEEHEVYGGEIPVEGEMDG-------DVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNV
        MEEEEHEVYGGEIP  GEMDG       D+DM+ ADDDAVKELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  + +QAGKEE D+RSVFVGNV
Subjt:  MEEEEHEVYGGEIPVEGEMDG-------DVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNV

Query:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVG--FRRPYAPPYFY
        DYACTPEEVQQHFQ+CGTV+RVTILTDKFGQPKGFAYVEF+E +AVQEAL LNESELHGRQLKVL KRTNVPG+KQ+R RR+NPY+G  FRRP+  PY Y
Subjt:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVG--FRRPYAPPYFY

Query:  SPYGYGKMPRFRRSMRYMPY
        SPYGYGK PRFRR MRYMPY
Subjt:  SPYGYGKMPRFRRSMRYMPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAAGAGCACGAGGTATACGGTGGAGAGATCCCAGTTGAAGGGGAGATGGACGGAGACGTTGACATGTCAGTCGCCGATGACGACGCCGTCAAGGAGCTTGA
CGAGATGAAAAAGCGTTTGAAGGAGATGGAGGAGGAAGCAGCGGCTCTCCGAGAAATGCAGGCCAAGGTTGAAAAAGAAATGGGAGCCGTCCAAGATCCTGCTGGTACAT
CAACTAGTCAAGCAGGCAAGGAGGAGACTGACTCACGATCTGTATTTGTCGGCAATGTTGACTATGCATGCACACCCGAAGAAGTGCAACAGCATTTCCAATCCTGTGGT
ACTGTCAACAGAGTGACTATTTTAACTGATAAATTTGGACAGCCGAAGGGCTTTGCCTATGTAGAATTTCTTGAAGCTGATGCTGTTCAAGAGGCCCTCCTTCTGAATGA
ATCGGAGCTTCATGGACGGCAACTCAAGGTTTTGCCCAAGAGAACAAATGTTCCTGGTATGAAGCAATATCGTCCCCGTCGTTATAACCCGTACGTGGGTTTTAGGAGAC
CGTATGCACCACCGTATTTTTATTCACCTTACGGCTATGGGAAGATGCCTCGGTTTCGAAGATCAATGAGGTACATGCCCTACTATTAG
mRNA sequenceShow/hide mRNA sequence
CTCTCTGGGCCCAACGATTCCGATTCTGTGCAGGCAGTTCTACGCATCGAGGAGATTTCTAGAAACGAAGGCGGAATTGCGAGCGAAAGAGAGATGGAGGAAGAAGAGCA
CGAGGTATACGGTGGAGAGATCCCAGTTGAAGGGGAGATGGACGGAGACGTTGACATGTCAGTCGCCGATGACGACGCCGTCAAGGAGCTTGACGAGATGAAAAAGCGTT
TGAAGGAGATGGAGGAGGAAGCAGCGGCTCTCCGAGAAATGCAGGCCAAGGTTGAAAAAGAAATGGGAGCCGTCCAAGATCCTGCTGGTACATCAACTAGTCAAGCAGGC
AAGGAGGAGACTGACTCACGATCTGTATTTGTCGGCAATGTTGACTATGCATGCACACCCGAAGAAGTGCAACAGCATTTCCAATCCTGTGGTACTGTCAACAGAGTGAC
TATTTTAACTGATAAATTTGGACAGCCGAAGGGCTTTGCCTATGTAGAATTTCTTGAAGCTGATGCTGTTCAAGAGGCCCTCCTTCTGAATGAATCGGAGCTTCATGGAC
GGCAACTCAAGGTTTTGCCCAAGAGAACAAATGTTCCTGGTATGAAGCAATATCGTCCCCGTCGTTATAACCCGTACGTGGGTTTTAGGAGACCGTATGCACCACCGTAT
TTTTATTCACCTTACGGCTATGGGAAGATGCCTCGGTTTCGAAGATCAATGAGGTACATGCCCTACTATTAGATGCTAACATTGTTCAGCCTTGATAAGTTTGTCCTGAA
CGAGTTGTTGGTACTTGCTTCTGATCCTTGAGAGAGCTCAGAAATGATGTATGTCTATATTTACAATCTGTTATTGCCCAAACTATCTTGGAAATTCACAATAATCAATT
ACTTTGCCGCTTCAATAAGCTTTTGCTCTATGACACTCTCAGAATCCATTGCCCAGCTTTAAGTCGATAGAGCTTTTAGACGATGTTTGAGAATGATTCTTGCAAATACT
TATAGGAAAAAAGTTAAGCCCATTGTCTGAACTGAGCTGGATATGATGCTTGTCTGTGCCGAAGAACTTGGAATTGAGCCATACTTAATGTAACATGGGTAAGATTTATA
TTTCCCATAAGTTTTCTTTGTTTTCAGTTATATCGGCAAATGTTGGGGCAGTTTGCATGCACAGGAAAAAGGTTAAGAACGTGTATTCTCATTGATATTCATAATCTTGT
GTATTTTCATTGATATTCATAATCTTGGATAGAAG
Protein sequenceShow/hide protein sequence
MEEEEHEVYGGEIPVEGEMDGDVDMSVADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSTSQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCG
TVNRVTILTDKFGQPKGFAYVEFLEADAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY