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CmoCh16G007930 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G007930
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:4030650..4032784
RNA-Seq ExpressionCmoCh16G007930
SyntenyCmoCh16G007930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577325.1 hypothetical protein SDJN03_24899, partial [Cucurbita argyrosperma subsp. sororia]1.7e-38100Show/hide
Query:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTRCSEKF
        MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTRCSEKF
Subjt:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTRCSEKF

KAG7015413.1 putative UDP-arabinopyranose mutase 5 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3498.78Show/hide
Query:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTR
        MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPT+
Subjt:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTR

XP_022984322.1 probable UDP-arabinopyranose mutase 5 isoform X2 [Cucurbita maxima]2.5e-34100Show/hide
Query:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPT
        MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPT
Subjt:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPT

XP_038904959.1 uncharacterized protein LOC120091153 isoform X1 [Benincasa hispida]1.3e-3593.18Show/hide
Query:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFL-ETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTRCSEKF
        MTTPPSLLSLTIHSAIHNLSRISDLSFLPDH+VLDLFL ETLRAGKLNER+LKLFVA+GKDEVL LIEAFNIQQ+VTPVLPTRCSEKF
Subjt:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFL-ETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTRCSEKF

XP_038904960.1 uncharacterized protein LOC120091153 isoform X2 [Benincasa hispida]5.5e-3794.25Show/hide
Query:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTRCSEKF
        MTTPPSLLSLTIHSAIHNLSRISDLSFLPDH+VLDLFLETLRAGKLNER+LKLFVA+GKDEVL LIEAFNIQQ+VTPVLPTRCSEKF
Subjt:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTRCSEKF

TrEMBL top hitse value%identityAlignment
A0A0A0KVY4 Uncharacterized protein5.2e-3389.66Show/hide
Query:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTRCSEKF
        MTTPPSLLSLTIHSAI NLS ISDLSFLPDH+VL LFLETL+AGKLNERVLKLFVA+GKDEVLSLI  F IQQIVTPVLPTRCSEKF
Subjt:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTRCSEKF

A0A1S4DX21 probable UDP-arabinopyranose mutase 5 isoform X21.8e-3092.59Show/hide
Query:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPT
        MTTPPSLLSLTIHSAI NLS ISDLSFLPDH+VL LFLETLRAGKLNERVLKLFVA+GKDEVLSLI AFNIQQIVTPVLPT
Subjt:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPT

A0A6J1C7X9 uncharacterized protein LOC1110082432.7e-3490.8Show/hide
Query:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTRCSEKF
        MT PPSLLSLTIHSAI NLS ISDLSFLPDH+VL+LFL+TLRAGKLNERVL+LFVATG DEVLSLIEAFNIQQIVTPVLPTRCSEKF
Subjt:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTRCSEKF

A0A6J1EMJ2 probable UDP-arabinopyranose mutase 5 isoform X21.2e-34100Show/hide
Query:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPT
        MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPT
Subjt:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPT

A0A6J1J1W3 probable UDP-arabinopyranose mutase 5 isoform X21.2e-34100Show/hide
Query:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPT
        MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPT
Subjt:  MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30390.1 unknown protein1.9e-2767.86Show/hide
Query:  PPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTRCSEKF
        PPSLLSLT+++A+ N+SRI+DLS LPDH+VLDLF  TL AGKLNERVL+LF+A+G +EVLS+I+A  I+  V+P+LPTRC EKF
Subjt:  PPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTRCSEKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACCCCTCCTTCCCTCCTGTCCCTCACAATCCATTCCGCCATCCATAATCTCTCTCGCATCTCCGATCTCTCCTTTCTCCCTGATCACGTCGTCCTTGATCTTTT
CCTGGAAACATTAAGGGCTGGAAAGTTAAACGAGAGGGTTTTAAAGTTGTTCGTGGCAACTGGAAAAGATGAAGTTCTTTCGCTCATCGAGGCATTCAATATCCAGCAAA
TTGTCACCCCTGTTCTTCCTACCAGGTGTTCAGAAAAATTCTAG
mRNA sequenceShow/hide mRNA sequence
GGGAAGAAAAAGTCTGGTAAACGTGGGTTCCTTGATCAGCGACGGAGAATACACAGCGTTGTCTCCGCTGCAAGACACCAATCTCGGGACACAGCTTAGACCAATTCCCT
TGTCCTTCACTCCTTGCCCTATCGGCTTGTTGAGAGAGAGAATCCTCAACTATGATCTGCATATATACCTCGAATGACAACCCCTCCTTCCCTCCTGTCCCTCACAATCC
ATTCCGCCATCCATAATCTCTCTCGCATCTCCGATCTCTCCTTTCTCCCTGATCACGTCGTCCTTGATCTTTTCCTGGAAACATTAAGGGCTGGAAAGTTAAACGAGAGG
GTTTTAAAGTTGTTCGTGGCAACTGGAAAAGATGAAGTTCTTTCGCTCATCGAGGCATTCAATATCCAGCAAATTGTCACCCCTGTTCTTCCTACCAGGTGTTCAGAAAA
ATTCTAG
Protein sequenceShow/hide protein sequence
MTTPPSLLSLTIHSAIHNLSRISDLSFLPDHVVLDLFLETLRAGKLNERVLKLFVATGKDEVLSLIEAFNIQQIVTPVLPTRCSEKF