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CmoCh16G008360 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G008360
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionIdentified as a screen for stress-responsive genes.
Genome locationCmo_Chr16:4392944..4393474
RNA-Seq ExpressionCmoCh16G008360
SyntenyCmoCh16G008360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015455.1 hypothetical protein SDJN02_23091, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-8399.43Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA
        MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA

Query:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI
        VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSA KIVRACKRLFGI
Subjt:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI

KAG7031359.1 hypothetical protein SDJN02_05399, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-4770.45Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA
        MAD+YSKI+AACK KSRS+DYSDL+SLPHS RF  AAA SNPNS DS++N+TNR  SR P      EEEEDEY    +A A+ L RN SVS+S SGFHSA
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA

Query:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI
        VKRALSMRRSSSVAERY RIHDQF TLASPIDDDE+E  +SKE R  GGSV    +KKK N+A KIVRACKRLFG+
Subjt:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI

KGN56255.1 hypothetical protein Csa_011668 [Cucumis sativus]2.2e-4568.89Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSG
        MAD YSKIKAA KFKSRSIDYSDL+SLPHS  F  +AAVSNP        +TNR     H RLPEE+EE  ++E +     +  AA L RN+SVSSSVSG
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSG

Query:  FHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI
        F SAVKRALSMRRSSSVAERYCRIHDQFAT ASPI+DDEME GD KE  K GGS +  KKKKKKN+AEKIVRACKR+FG+
Subjt:  FHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI

XP_022136741.1 uncharacterized protein LOC111008371 [Momordica charantia]5.1e-5071.11Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNS--HDSNKNKTNRQHSR--LPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSG
        MAD YSKIKAACKFKSRSIDYSDL SLPHS +F   AAV NPNS  H+S++N+ NR  ++  LP      EEEEDEYGG      AALSRN+SVSSS SG
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNS--HDSNKNKTNRQHSR--LPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSG

Query:  FHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI
         HSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDD+E+  GDSKE RK+ GSV    ++KKKN+A KIVRACKRLFG+
Subjt:  FHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI

XP_022929198.1 uncharacterized protein LOC111435863 [Cucurbita moschata]1.2e-83100Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA
        MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA

Query:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI
        VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI
Subjt:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI

TrEMBL top hitse value%identityAlignment
A0A0A0L2N9 Uncharacterized protein1.1e-4568.89Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSG
        MAD YSKIKAA KFKSRSIDYSDL+SLPHS  F  +AAVSNP        +TNR     H RLPEE+EE  ++E +     +  AA L RN+SVSSSVSG
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSG

Query:  FHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI
        F SAVKRALSMRRSSSVAERYCRIHDQFAT ASPI+DDEME GD KE  K GGS +  KKKKKKN+AEKIVRACKR+FG+
Subjt:  FHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI

A0A2N9II75 Uncharacterized protein1.9e-1846.55Show/hide
Query:  DSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNS-HDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSAV
        + Y+KI+     KS+S+D+SD +  P            N NS H S   +TN+      ++ + +E  EDE G   S     +SR+ SVSSS SGF SA+
Subjt:  DSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNS-HDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSAV

Query:  KRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFG
        KRA S+RRSSSV+ERYCRIHDQ  TL SPIDDDE+ D  S   R    SVKK+K K       KI++ACKRLFG
Subjt:  KRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFG

A0A5A7V402 Uncharacterized protein1.4e-4571.59Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QHSRLPEEEEEEEEEE-DEYGGEVSARAAALSRNNSVSSSVS
        MAD YSKIKAACKFKSRSIDYSDL+SLPHS  FN  AAVSNP SH SN ++TNR     H RLPEE+EE  ++E D   G     AA LSRN+SVSSSVS
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNR----QHSRLPEEEEEEEEEE-DEYGGEVSARAAALSRNNSVSSSVS

Query:  GFHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACK
        GF SAVKRALSMRRSSSVAERYCRIHDQFAT ASPI+DDE+E GDSKE  K GGS    KKKKK N+A KIVRA +
Subjt:  GFHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACK

A0A6J1C4C9 uncharacterized protein LOC1110083712.5e-5071.11Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNS--HDSNKNKTNRQHSR--LPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSG
        MAD YSKIKAACKFKSRSIDYSDL SLPHS +F   AAV NPNS  H+S++N+ NR  ++  LP      EEEEDEYGG      AALSRN+SVSSS SG
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNS--HDSNKNKTNRQHSR--LPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSG

Query:  FHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI
         HSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDD+E+  GDSKE RK+ GSV    ++KKKN+A KIVRACKRLFG+
Subjt:  FHSAVKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI

A0A6J1ERE9 uncharacterized protein LOC1114358635.8e-84100Show/hide
Query:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA
        MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA
Subjt:  MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSA

Query:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI
        VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI
Subjt:  VKRALSMRRSSSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G24275.1 Identified as a screen for stress-responsive genes.1.7e-1150Show/hide
Query:  LSRNNSVSSSVSGFHSAVKRALSMRRSSSVAERYCRIHDQFATLASPI---DDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEK--IVRACKRLFGI
        LSRN SVS+S     S +K  +SMRRSSSV+ERYCRI+DQ +    P+   + DE ED D KE         K  KKKK N+ +K   V+ACKR FGI
Subjt:  LSRNNSVSSSVSGFHSAVKRALSMRRSSSVAERYCRIHDQFATLASPI---DDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEK--IVRACKRLFGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATAGCTACTCCAAAATCAAAGCCGCCTGCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCACTTCGCTTCCTCACTCTCCTAGATTCAACGCTGCCGC
CGCCGTCTCCAATCCGAACTCTCACGATTCCAATAAGAACAAGACGAATCGGCAACACAGCCGTTTGCCGGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGACGAATACG
GCGGAGAAGTCTCCGCCAGAGCCGCCGCGCTGAGTCGGAACAACTCTGTTTCTTCATCAGTCTCTGGATTCCATTCAGCGGTGAAGAGAGCTCTGTCGATGCGGAGATCT
TCGTCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACGCTTGCATCGCCGATCGATGATGATGAAATGGAAGATGGAGATTCGAAGGAGGAAAGAAAAAC
AGGAGGATCTGTGAAGAAGACGAAGAAGAAGAAGAAGAAGAACTCGGCAGAGAAGATCGTTAGAGCCTGTAAGCGACTTTTTGGAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATAGCTACTCCAAAATCAAAGCCGCCTGCAAATTCAAATCAAGATCCATCGATTACTCCGATCTCACTTCGCTTCCTCACTCTCCTAGATTCAACGCTGCCGC
CGCCGTCTCCAATCCGAACTCTCACGATTCCAATAAGAACAAGACGAATCGGCAACACAGCCGTTTGCCGGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGACGAATACG
GCGGAGAAGTCTCCGCCAGAGCCGCCGCGCTGAGTCGGAACAACTCTGTTTCTTCATCAGTCTCTGGATTCCATTCAGCGGTGAAGAGAGCTCTGTCGATGCGGAGATCT
TCGTCCGTAGCGGAACGGTACTGTAGGATTCACGATCAGTTCGCGACGCTTGCATCGCCGATCGATGATGATGAAATGGAAGATGGAGATTCGAAGGAGGAAAGAAAAAC
AGGAGGATCTGTGAAGAAGACGAAGAAGAAGAAGAAGAAGAACTCGGCAGAGAAGATCGTTAGAGCCTGTAAGCGACTTTTTGGAATCTAG
Protein sequenceShow/hide protein sequence
MADSYSKIKAACKFKSRSIDYSDLTSLPHSPRFNAAAAVSNPNSHDSNKNKTNRQHSRLPEEEEEEEEEEDEYGGEVSARAAALSRNNSVSSSVSGFHSAVKRALSMRRS
SSVAERYCRIHDQFATLASPIDDDEMEDGDSKEERKTGGSVKKTKKKKKKNSAEKIVRACKRLFGI