; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G008460 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G008460
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLOW QUALITY PROTEIN: vicilin-like seed storage protein At2g18540
Genome locationCmo_Chr16:4463067..4464095
RNA-Seq ExpressionCmoCh16G008460
SyntenyCmoCh16G008460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027687.1 hypothetical protein SDJN02_11702, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-09100Show/hide
Query:  EEEEEKRRKEKKERGKKGAVTNSCGKYNIIKETDTW
        EEEEEKRRKEKKERGKKGAVTNSCGKYNIIKETDTW
Subjt:  EEEEEKRRKEKKERGKKGAVTNSCGKYNIIKETDTW

KAG7031373.1 hypothetical protein SDJN02_05413, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-0536.1Show/hide
Query:  MATDRNGELFTKRGSSDNDETSEGR-GEEENGA---------------------------SSDSDDKHDKKRGMSS------------------------
        MA DRNGEL  KRGSSDNDE S G  G E+N A                           SSDSD+KHD+KRG SS                        
Subjt:  MATDRNGELFTKRGSSDNDETSEGR-GEEENGA---------------------------SSDSDDKHDKKRGMSS------------------------

Query:  ---------------------------------------RRRR---------------TSRKRHEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIK
                                               RRRR                 R+R E+EEEKRR     KEKKERGKKGAVTNS GKY IIK
Subjt:  ---------------------------------------RRRR---------------TSRKRHEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIK

Query:  ETDTW
        ETD W
Subjt:  ETDTW

XP_008226647.1 PREDICTED: LOW QUALITY PROTEIN: vicilin-like seed storage protein At2g18540 [Prunus mume]2.4e-0647.31Show/hide
Query:  TDRNGELFTKRGSSDNDETSEGRGE-EENGASSDSDDKHDKKRGMSSRRRRTSRKRHEEEEEKRRKEKKERGKKGAVTNSCGKYNIIKETDTW
        +DR      +R SS++D  S+ + E EE+G+  D + K  ++     RRR   RK+ +E+ +K+RKEKKE+GKKGAVTNS GKY II+ETD W
Subjt:  TDRNGELFTKRGSSDNDETSEGRGE-EENGASSDSDDKHDKKRGMSSRRRRTSRKRHEEEEEKRRKEKKERGKKGAVTNSCGKYNIIKETDTW

XP_022943075.1 stress response protein NST1 [Cucurbita moschata]3.5e-0536.1Show/hide
Query:  MATDRNGELFTKRGSSDNDETSEGR-GEEENGA---------------------------SSDSDDKHDKKRGMSS------------------------
        MA DRNGEL  KRGSSDNDE S G  G E+N A                           SSDSD+KHD+KRG SS                        
Subjt:  MATDRNGELFTKRGSSDNDETSEGR-GEEENGA---------------------------SSDSDDKHDKKRGMSS------------------------

Query:  ------------------------------RRRR------------------------TSRKRHEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIK
                                      RRRR                          R+R E+EEEKRR     KEKKERGKKGAVTNS GKY IIK
Subjt:  ------------------------------RRRR------------------------TSRKRHEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIK

Query:  ETDTW
        ETD W
Subjt:  ETDTW

XP_038906271.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]1.2e-0534.11Show/hide
Query:  MATDRNGELFTKRGSSDNDETSEGRGEEENGASS------------------------------------DSDDKHDKKRGMSSRRRRTSRKRH------
        MA DRNGEL TKRGSSDN+E  E  G E+NGA S                                    DSD+KHDKKRG SSRR+  SR+R+      
Subjt:  MATDRNGELFTKRGSSDNDETSEGRGEEENGASS------------------------------------DSDDKHDKKRGMSSRRRRTSRKRH------

Query:  -------------------------------------------------------------------------EEEEEKRR-----KEKKERGKKGAVTN
                                                                                 E EEEKRR     KEKKERGKKGAVTN
Subjt:  -------------------------------------------------------------------------EEEEEKRR-----KEKKERGKKGAVTN

Query:  SCGKYNIIKETDTW
        S GKY IIKETD W
Subjt:  SCGKYNIIKETDTW

TrEMBL top hitse value%identityAlignment
A0A1S3BU92 LOW QUALITY PROTEIN: vicilin-like seed storage protein At2g185401.4e-0433.02Show/hide
Query:  MATDRNGELFTKRGSSDNDETSEGRGEE-----------------ENGAS------------------SDSDDKHDKKRGMSSRRRRTSRKRH-------
        MA DRNGEL TKRGSSD+DE  E  GE+                 EN  S                  SDSD+KH K+RG SSRR+  SR+R+       
Subjt:  MATDRNGELFTKRGSSDNDETSEGRGEE-----------------ENGAS------------------SDSDDKHDKKRGMSSRRRRTSRKRH-------

Query:  ----------------------------------EEEEEKRR------------------------------------------KEKKERGKKGAVTNSC
                                          E EEE+RR                                          KEKKERGKKGAVTNS 
Subjt:  ----------------------------------EEEEEKRR------------------------------------------KEKKERGKKGAVTNSC

Query:  GKYNIIKETDTW
        GKY IIKETD W
Subjt:  GKYNIIKETDTW

A0A5D3BTB2 Vicilin-like seed storage protein3.8e-0539.44Show/hide
Query:  MATDRNGELFTKRGSSDNDETSEGRGEE-----------------ENGAS------------------SDSDDKHDKKRGMSSRRRRTSRKRHEEEEEKR
        MA DRNGEL TKRGSSD+DE  E  GE+                 EN  S                  SDSD+KH K+RG SSRR+  SR+R+   EE  
Subjt:  MATDRNGELFTKRGSSDNDETSEGRGEE-----------------ENGAS------------------SDSDDKHDKKRGMSSRRRRTSRKRHEEEEEKR

Query:  RKEKKER-------------GKKGAVTNSCGKYNIIKETDTW
          E  E               +  ++TNS GKY IIKETD W
Subjt:  RKEKKER-------------GKKGAVTNSCGKYNIIKETDTW

A0A6A5N7X5 Uncharacterized protein4.2e-0447.87Show/hide
Query:  SDNDETSEGRGEEENGASSDSDDKHDKKR----GMSSRRRR---TSRKRHEEEEEKRRKEK--------KERGKKGAVTNSCGKYNIIKETDTW
        S +D +S+   EE++  SS+S+   D+KR        RRRR     R++ E+EEEKR+KEK        KERGKKGAVTNS GKY +I+ETD W
Subjt:  SDNDETSEGRGEEENGASSDSDDKHDKKR----GMSSRRRR---TSRKRHEEEEEKRRKEK--------KERGKKGAVTNSCGKYNIIKETDTW

A0A6J1FXC4 stress response protein NST11.7e-0536.1Show/hide
Query:  MATDRNGELFTKRGSSDNDETSEGR-GEEENGA---------------------------SSDSDDKHDKKRGMSS------------------------
        MA DRNGEL  KRGSSDNDE S G  G E+N A                           SSDSD+KHD+KRG SS                        
Subjt:  MATDRNGELFTKRGSSDNDETSEGR-GEEENGA---------------------------SSDSDDKHDKKRGMSS------------------------

Query:  ------------------------------RRRR------------------------TSRKRHEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIK
                                      RRRR                          R+R E+EEEKRR     KEKKERGKKGAVTNS GKY IIK
Subjt:  ------------------------------RRRR------------------------TSRKRHEEEEEKRR-----KEKKERGKKGAVTNSCGKYNIIK

Query:  ETDTW
        ETD W
Subjt:  ETDTW

A0A6J1KTR2 troponin I4.9e-0535.58Show/hide
Query:  MATDRNGELFTKRGSSDNDETSEGR----GEEENGA---------------------------SSDSDDKHDKKRGMS------SRRRRTS---------
        MA DRNGEL  KRGSSDNDE S G     G E+N A                           SSDSD+KHD+KRG S      SRRR +S         
Subjt:  MATDRNGELFTKRGSSDNDETSEGR----GEEENGA---------------------------SSDSDDKHDKKRGMS------SRRRRTS---------

Query:  ---------------------------------------------------------------RKRHEEEEEKRR-----KEKKERGKKGAVTNSCGKYN
                                                                       R+R E+EEEKRR     KEKKERGKKGAVTNS GKY 
Subjt:  ---------------------------------------------------------------RKRHEEEEEKRR-----KEKKERGKKGAVTNSCGKYN

Query:  IIKETDTW
        IIKETD W
Subjt:  IIKETDTW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACAGATCGAAACGGTGAGCTATTTACTAAGAGAGGAAGTTCCGATAACGACGAGACCAGCGAAGGAAGAGGAGAAGAAGAGAACGGTGCTAGTTCGGATTCCGA
TGATAAGCATGACAAGAAACGTGGAATGAGTTCAAGAAGAAGGCGCACATCCCGTAAACGACACGAGGAGGAGGAAGAGAAACGGAGGAAGGAGAAGAAGGAACGAGGAA
AGAAAGGAGCAGTGACGAATTCGTGCGGAAAGTACAACATTATCAAAGAAACTGATACCTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACAGATCGAAACGGTGAGCTATTTACTAAGAGAGGAAGTTCCGATAACGACGAGACCAGCGAAGGAAGAGGAGAAGAAGAGAACGGTGCTAGTTCGGATTCCGA
TGATAAGCATGACAAGAAACGTGGAATGAGTTCAAGAAGAAGGCGCACATCCCGTAAACGACACGAGGAGGAGGAAGAGAAACGGAGGAAGGAGAAGAAGGAACGAGGAA
AGAAAGGAGCAGTGACGAATTCGTGCGGAAAGTACAACATTATCAAAGAAACTGATACCTGGTGA
Protein sequenceShow/hide protein sequence
MATDRNGELFTKRGSSDNDETSEGRGEEENGASSDSDDKHDKKRGMSSRRRRTSRKRHEEEEEKRRKEKKERGKKGAVTNSCGKYNIIKETDTW