CuGenDBv2

Gene ID	CmoCh16G008690
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Vacuolar protein sorting-associated protein 51 homolog
Genome location	Cmo_Chr16:4638528..4643085
RNA-Seq Expression	CmoCh16G008690
Synteny	CmoCh16G008690
Gene Ontology terms	GO:0006869 - lipid transport (biological process) GO:0007030 - Golgi organization (biological process) GO:0015031 - protein transport (biological process) GO:0032456 - endocytic recycling (biological process) GO:0042147 - retrograde transport, endosome to Golgi (biological process) GO:0000938 - GARP complex (cellular component) GO:0005829 - cytosol (cellular component)
InterPro domains	IPR014812 - Vacuolar protein sorting-associated protein 51

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577400.1 Vacuolar protein sorting-associated protein 51-like protein, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-24

96.83

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Query:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE
        MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSIL +
Subjt:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE

KAG7015479.1 Vacuolar protein sorting-associated protein 51-like protein [Cucurbita argyrosperma subsp. argyrosperma]

2.2e-23

95.24

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Query:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE
        MEIDNG MDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSIL +
Subjt:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE

XP_022929381.1 vacuolar protein sorting-associated protein 51 homolog isoform X1 [Cucurbita moschata]

2.6e-24

96.83

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Query:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE
        MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSIL +
Subjt:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE

XP_022929385.1 vacuolar protein sorting-associated protein 51 homolog isoform X2 [Cucurbita moschata]

2.6e-24

96.83

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Query:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE
        MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSIL +
Subjt:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE

XP_023552385.1 vacuolar protein sorting-associated protein 51 homolog isoform X1 [Cucurbita pepo subsp. pepo]

2.2e-23

95.24

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Query:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE
        MEIDNG MDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSIL +
Subjt:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EMM4 Vacuolar protein sorting-associated protein 51 homolog

1.3e-24

96.83

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Query:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE
        MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSIL +
Subjt:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE

A0A6J1EU93 Vacuolar protein sorting-associated protein 51 homolog

1.3e-24

96.83

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Query:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE
        MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSIL +
Subjt:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE

A0A6J1J462 Vacuolar protein sorting-associated protein 51 homolog

1.1e-23

95.24

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Query:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE
        MEIDNG MDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSIL +
Subjt:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE

A0A6J1JAN2 Vacuolar protein sorting-associated protein 51 homolog

1.1e-23

95.24

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Query:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE
        MEIDNG MDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSIL +
Subjt:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE

A0A6J1K9H7 Vacuolar protein sorting-associated protein 51 homolog

4.2e-20

85.71

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Query:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE
        MEI++ PMDEK KRMRDLLSSFYSPDAS SGSS GSSNRYASPLE INTTSFNPDQYMSIL +
Subjt:  MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE

SwissProt top hits

e value

%identity

Alignment

Q0WQ75 Vacuolar protein sorting-associated protein 51 homolog

4.2e-09

55.56

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Query:  MEIDNGPMDEKTKRMRDLLSSFYSPD--ASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSIL
        M  +  PMDEK KRMRDLLSSFY+PD   STSGSS+ +S       + IN+TSF+ DQYM ++
Subjt:  MEIDNGPMDEKTKRMRDLLSSFYSPD--ASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSIL

Arabidopsis top hits

e value

%identity

Alignment

AT4G02030.1 Vps51/Vps67 family (components of vesicular transport) protein

3.0e-10

55.56

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Query:  MEIDNGPMDEKTKRMRDLLSSFYSPD--ASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSIL
        M  +  PMDEK KRMRDLLSSFY+PD   STSGSS+ +S       + IN+TSF+ DQYM ++
Subjt:  MEIDNGPMDEKTKRMRDLLSSFYSPD--ASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSIL

AT4G02030.2 Vps51/Vps67 family (components of vesicular transport) protein

1.8e-10

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Query:  MEIDNGPMDEKTKRMRDLLSSFYSPD--ASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE--GIEGSDLP
        M  +  PMDEK KRMRDLLSSFY+PD   STSGSS+ +S       + IN+TSF+ DQYM ++     +  SDLP
Subjt:  MEIDNGPMDEKTKRMRDLLSSFYSPD--ASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAE--GIEGSDLP

Sequences

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CDS sequence

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ATGGAGATTGATAATGGTCCAATGGATGAAAAAACTAAAAGGATGAGGGATCTGCTATCTAGTTTCTACTCCCCTGATGCTTCAACGTCTGGCTCATCCATGGGTTCATC
TAATCGATATGCTTCTCCTTTAGAAGCTATTAACACCACCTCATTTAATCCTGATCAGTATATGAGCATTCTGGCTGAAGGAATAGAGGGCTCTGATCTTCCTGAGAAAT
GA

mRNA sequence

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CCCATTTCGGCTACCGCTCCCCCTCCTATCACCGGCCACTGCACTCTATCCGGCCGTTCCTGCCGGCCGCCGTCTCAGCTGCTGCTGCCGCACGCTGCATTCTCAGCCTT
CCAATTAAATTGCCGCCGTTCTCCCTCTCAAACTCTGTCGCCCCCTCCGAGCTGTCAGTGTTTTTATCTCTGTATTTTTTTTCATCAGAAACACAGTGGTTAAGCCCCTA
ATCCGCGCCCTTGGAGAGATCGCGCCACCACAGCCGCCATTTATCAGAACTCCGAGAAGGTAGGATAAGCTGTAAGCACGAAAGGTAACTGCCATAGCCAGGATCTTCTA
TCTAGAATAATAGACGTCAGTCGGAAGAGTTTACAAGGAGGAAGCAAGAGCAGAAATGGAGATTGATAATGGTCCAATGGATGAAAAAACTAAAAGGATGAGGGATCTGC
TATCTAGTTTCTACTCCCCTGATGCTTCAACGTCTGGCTCATCCATGGGTTCATCTAATCGATATGCTTCTCCTTTAGAAGCTATTAACACCACCTCATTTAATCCTGAT
CAGTATATGAGCATTCTGGCTGAAGGAATAGAGGGCTCTGATCTTCCTGAGAAATGA

Protein sequence

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MEIDNGPMDEKTKRMRDLLSSFYSPDASTSGSSMGSSNRYASPLEAINTTSFNPDQYMSILAEGIEGSDLPEK

CmoCh16G008690 (gene) of Cucurbita moschata (Rifu) v1 genome