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CmoCh16G008800 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G008800
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description(+)-gamma-cadinene synthase-like
Genome locationCmo_Chr16:4768111..4768642
RNA-Seq ExpressionCmoCh16G008800
SyntenyCmoCh16G008800
Gene Ontology termsGO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0000287 - magnesium ion binding (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
InterPro domainsIPR001906 - Terpene synthase, N-terminal domain
IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR008949 - Isoprenoid synthase domain superfamily
IPR036965 - Terpene synthase, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577453.1 hypothetical protein SDJN03_25027, partial [Cucurbita argyrosperma subsp. sororia]7.2e-4884.87Show/hide
Query:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ
        MEEQAK  KVEVKKMLMISNRNL  KLSL+DSIQRLGV YHFENEIDQVLEKIY NYRDFTSIDGDEDL  VSLLFRLLRQQGYKIPCDIFTKF+ESNG+
Subjt:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ

Query:  FKESLAEDGKRILSVYEVA
        FKESLA+D + IL++YE A
Subjt:  FKESLAEDGKRILSVYEVA

XP_022932164.1 (+)-gamma-cadinene synthase-like [Cucurbita moschata]7.2e-4884.87Show/hide
Query:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ
        MEEQAK  KVEVKKMLMISNRNL  KLSL+DSIQRLGV YHFENEIDQVLEKIY NYRDFTSIDGDEDL  VSLLFRLLRQQGYKIPCDIFTKF+ESNG+
Subjt:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ

Query:  FKESLAEDGKRILSVYEVA
        FKESLA+D + IL++YE A
Subjt:  FKESLAEDGKRILSVYEVA

XP_022985192.1 (+)-gamma-cadinene synthase-like isoform X2 [Cucurbita maxima]3.6e-4781.51Show/hide
Query:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ
        MEE+AK+ K EVKKMLMISNRNL  KLSL+DSIQRL V+YHFENEIDQ+LEKIY NYRDFTSIDG +DLHIVSLLFRLLRQ GY+IPCDIFTKF+ESNG+
Subjt:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ

Query:  FKESLAEDGKRILSVYEVA
        FKESLAED + ILS+YE A
Subjt:  FKESLAEDGKRILSVYEVA

XP_022985195.1 (+)-gamma-cadinene synthase-like [Cucurbita maxima]3.6e-4781.51Show/hide
Query:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ
        MEE+AK+ K EVKKMLMISNRNL  KLSL+DSIQRL V+YHFENEIDQ+LEKIY NYRDFTSIDG +DLHIVSLLFRLLRQ GY+IPCDIFTKF+ESNG+
Subjt:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ

Query:  FKESLAEDGKRILSVYEVA
        FKESLAED + ILS+YE A
Subjt:  FKESLAEDGKRILSVYEVA

XP_023520451.1 LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita pepo subsp. pepo]1.1e-4884.87Show/hide
Query:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ
        ME+Q K+ KVEVKKMLMISNRNL  KLSL+DSIQRLGV YHFENEIDQVLEKIY NYRDFTSIDGDEDLH VSLLFRLLRQQGYKIPCDIFTKF+ESNG+
Subjt:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ

Query:  FKESLAEDGKRILSVYEVA
        FKESL ED + ILS+YE A
Subjt:  FKESLAEDGKRILSVYEVA

TrEMBL top hitse value%identityAlignment
A0A6J1EN57 (+)-gamma-cadinene synthase-like isoform X12.3e-4779.83Show/hide
Query:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ
        MEE+AK+ K EVKKMLMISNRNL  KLSL+DSIQRL V+YHFENEIDQ+LE+IY NYRDFTSIDGD+DLH +SLLFRLLRQ GY+IPCDIFTKF+ESNG+
Subjt:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ

Query:  FKESLAEDGKRILSVYEVA
        FKESLAED + ILS+YE A
Subjt:  FKESLAEDGKRILSVYEVA

A0A6J1EW93 (+)-gamma-cadinene synthase-like3.5e-4884.87Show/hide
Query:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ
        MEEQAK  KVEVKKMLMISNRNL  KLSL+DSIQRLGV YHFENEIDQVLEKIY NYRDFTSIDGDEDL  VSLLFRLLRQQGYKIPCDIFTKF+ESNG+
Subjt:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ

Query:  FKESLAEDGKRILSVYEVA
        FKESLA+D + IL++YE A
Subjt:  FKESLAEDGKRILSVYEVA

A0A6J1J473 (+)-gamma-cadinene synthase-like isoform X21.7e-4781.51Show/hide
Query:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ
        MEE+AK+ K EVKKMLMISNRNL  KLSL+DSIQRL V+YHFENEIDQ+LEKIY NYRDFTSIDG +DLHIVSLLFRLLRQ GY+IPCDIFTKF+ESNG+
Subjt:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ

Query:  FKESLAEDGKRILSVYEVA
        FKESLAED + ILS+YE A
Subjt:  FKESLAEDGKRILSVYEVA

A0A6J1J7F9 (+)-gamma-cadinene synthase-like isoform X11.7e-4781.51Show/hide
Query:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ
        MEE+AK+ K EVKKMLMISNRNL  KLSL+DSIQRL V+YHFENEIDQ+LEKIY NYRDFTSIDG +DLHIVSLLFRLLRQ GY+IPCDIFTKF+ESNG+
Subjt:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ

Query:  FKESLAEDGKRILSVYEVA
        FKESLAED + ILS+YE A
Subjt:  FKESLAEDGKRILSVYEVA

A0A6J1JAP8 (+)-gamma-cadinene synthase-like1.7e-4781.51Show/hide
Query:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ
        MEE+AK+ K EVKKMLMISNRNL  KLSL+DSIQRL V+YHFENEIDQ+LEKIY NYRDFTSIDG +DLHIVSLLFRLLRQ GY+IPCDIFTKF+ESNG+
Subjt:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ

Query:  FKESLAEDGKRILSVYEVA
        FKESLAED + ILS+YE A
Subjt:  FKESLAEDGKRILSVYEVA

SwissProt top hitse value%identityAlignment
B2KSJ5 (+)-gamma-cadinene synthase1.2e-2952.85Show/hide
Query:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSI----DGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIE
        M+E+ ++ K E++ M++    N   KL+L+DSIQRLGV YHFE+E+D+ LE IYV+Y +   +       EDLHI +LLFRLLRQQGY+I CDIF KF++
Subjt:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSI----DGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIE

Query:  SNGQFKESLAEDGKRILSVYEVA
         NG+FKESL ED + +LS+YE +
Subjt:  SNGQFKESLAEDGKRILSVYEVA

B9SBV6 Probable terpene synthase 31.3e-2347.46Show/hide
Query:  EEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQF
        +EQAK  + EV++M++   +   GKL LID IQRLG+ YHFE EI +V+E++Y NY      D DEDL+ ++L FRLLRQQGY +  D+F KF +  G F
Subjt:  EEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQF

Query:  KESLAEDGKRILSVYEVA
        K+ L  D + +LS++E +
Subjt:  KESLAEDGKRILSVYEVA

E3W208 Sesquiterpene synthase3.7e-2347.01Show/hide
Query:  EEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVN-YRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ
        E Q +E K +V++ L  +      +L++ID+ QRLG+ YHFENEI++ L+ IY++ Y + T  +G +DL  V+L FRLLRQ GY++ CD+F KF +S G 
Subjt:  EEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVN-YRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ

Query:  FKESLAEDGKRILSVYE
        FK SL ED K +L +YE
Subjt:  FKESLAEDGKRILSVYE

Q6Q3H3 (-)-germacrene D synthase5.8e-2447.86Show/hide
Query:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ
        +++  ++ K EV+KMLM ++ +   KL LID+IQRLGV YHFE+EID+VL+ ++    D + +  +ED++  SL FRLLRQQGY + CD+F  F ++ G 
Subjt:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ

Query:  FKESLAEDGKRILSVYE
        FKESL+ D + +LS+YE
Subjt:  FKESLAEDGKRILSVYE

U3LVL5 Germacrene D synthase1.7e-2345.76Show/hide
Query:  EEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQF
        EE AK+ ++ VKK+L ++  +   K+ LID+IQRLG+ YHFE EI ++L+ I+ N++       D+DLH V+L FRLLRQ GY + CD+F  F+   G F
Subjt:  EEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQF

Query:  KESLAEDGKRILSVYEVA
         ES+  D + +LS+YE A
Subjt:  KESLAEDGKRILSVYEVA

Arabidopsis top hitse value%identityAlignment
AT3G14490.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein3.5e-1639.64Show/hide
Query:  KVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQFKESLAED
        K +V+ ML  S  +   ++ LI  +  LG+ YHFE EID++L + + N  D   I  + DL  +S +F + R +GY +PC  F +F   +G+FKESLAED
Subjt:  KVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQFKESLAED

Query:  GKRILSVYEVA
         + +L +YE A
Subjt:  GKRILSVYEVA

AT3G14520.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein3.5e-1637.82Show/hide
Query:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ
        +E + +  K  VK MLM S  +   K+ LI  +  LG  YHF+ EI  +L+  +    D   I G++DL  +S++F + R  G+K+ CD F +F   +G+
Subjt:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQ

Query:  FKESLAEDGKRILSVYEVA
        FKESLA+D + +L ++EVA
Subjt:  FKESLAEDGKRILSVYEVA

AT3G14540.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein5.9e-1637.4Show/hide
Query:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDG----DEDLHIVSLLFRLLRQQGYKIPCDIFTKFIE
        +E + +  K  VK MLM S  +   K+ LI  +  LG  YHF+ EI  +L+        FT +DG    ++DL  +S++F + R  G+K+ CD F +F  
Subjt:  MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDG----DEDLHIVSLLFRLLRQQGYKIPCDIFTKFIE

Query:  SNGQFKESLAEDGKRILSVYEVA
         +G+FKESLA+D + +L ++EVA
Subjt:  SNGQFKESLAEDGKRILSVYEVA

AT3G29410.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein4.5e-1636.04Show/hide
Query:  KVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQFKESLAED
        K +V+ MLM  + +   ++ LI  +  LG+ Y++ENEI+++L K Y        I  ++DL  ++++F + R  G+K+PCD+F +F   +G+FKESL  D
Subjt:  KVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQFKESLAED

Query:  GKRILSVYEVA
         + +L +YE A
Subjt:  GKRILSVYEVA

AT4G13300.1 terpenoid synthase 133.5e-1641.23Show/hide
Query:  KVEVKKMLMI--SNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDE-DLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQFKESL
        K EV+K+L     +     K+ LI S+  LG+ +HFENEI  +LE     +R    I GDE DL  +S++FR+ R  G+ +P  +F +F   +G+F+ SL
Subjt:  KVEVKKMLMI--SNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDE-DLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQFKESL

Query:  AEDGKRILSVYEVA
         ED K ILS+YE A
Subjt:  AEDGKRILSVYEVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAACAAGCTAAAGAGTCGAAAGTAGAAGTGAAAAAGATGCTAATGATTTCTAATAGAAATCTTTTTGGGAAGTTAAGTTTGATTGATTCAATCCAACGGTTAGG
CGTATATTATCATTTCGAAAATGAGATTGATCAAGTCTTAGAAAAAATATATGTAAACTATAGAGACTTCACAAGTATTGATGGTGACGAGGATCTTCACATTGTCTCTC
TTCTATTTCGACTGCTTAGACAACAAGGTTATAAAATTCCATGCGACATATTCACAAAATTTATAGAAAGTAATGGACAGTTCAAAGAATCGCTAGCAGAAGATGGCAAA
AGAATTTTAAGTGTATATGAAGTGGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAACAAGCTAAAGAGTCGAAAGTAGAAGTGAAAAAGATGCTAATGATTTCTAATAGAAATCTTTTTGGGAAGTTAAGTTTGATTGATTCAATCCAACGGTTAGG
CGTATATTATCATTTCGAAAATGAGATTGATCAAGTCTTAGAAAAAATATATGTAAACTATAGAGACTTCACAAGTATTGATGGTGACGAGGATCTTCACATTGTCTCTC
TTCTATTTCGACTGCTTAGACAACAAGGTTATAAAATTCCATGCGACATATTCACAAAATTTATAGAAAGTAATGGACAGTTCAAAGAATCGCTAGCAGAAGATGGCAAA
AGAATTTTAAGTGTATATGAAGTGGCATGA
Protein sequenceShow/hide protein sequence
MEEQAKESKVEVKKMLMISNRNLFGKLSLIDSIQRLGVYYHFENEIDQVLEKIYVNYRDFTSIDGDEDLHIVSLLFRLLRQQGYKIPCDIFTKFIESNGQFKESLAEDGK
RILSVYEVA