; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G008880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G008880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description(+)-gamma-cadinene synthase-like
Genome locationCmo_Chr16:4871321..4871854
RNA-Seq ExpressionCmoCh16G008880
SyntenyCmoCh16G008880
Gene Ontology termsGO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0045338 - farnesyl diphosphate metabolic process (biological process)
GO:0051762 - sesquiterpene biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0047461 - (+)-delta-cadinene synthase activity (molecular function)
InterPro domainsIPR008949 - Isoprenoid synthase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577413.1 hypothetical protein SDJN03_24987, partial [Cucurbita argyrosperma subsp. sororia]1.2e-6098.33Show/hide
Query:  SRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILMRVVNVSRVMNLLYLDEDGY
        +RRPKVIEAA IIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILMRVVNVSRVMNLLYLDEDGY
Subjt:  SRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILMRVVNVSRVMNLLYLDEDGY

Query:  TNANDRTKCLIESLLVNPMP
        TNANDRTKCLIESLLVNPMP
Subjt:  TNANDRTKCLIESLLVNPMP

XP_022932164.1 (+)-gamma-cadinene synthase-like [Cucurbita moschata]8.5e-5978.57Show/hide
Query:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL
        +SIS +GMGDIVTNEV+EW SRRPK+++A+ +I RLMDD+VSHKFEQ+R+HV SAVECYMEQYGC E EACVELHKQVVD WKDINEACL+PIDVPM IL
Subjt:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL

Query:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP
        MRVVN+SRV+N+LYLDEDGYTN + RTK LIESLLVN +P
Subjt:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP

XP_022985191.1 (+)-gamma-cadinene synthase-like isoform X1 [Cucurbita maxima]6.5e-5978.57Show/hide
Query:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL
        +S++LIGMGDIVTN+++EWF R+PK+I A+ II RLMDD+VS KFEQ+R+HV S VECY EQYGC E EAC+ELHKQVVD WKDINEACLHPIDVPM IL
Subjt:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL

Query:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP
        MR+VNVSRV+NLLY DEDGYTNAN RTK LIESLLVNPMP
Subjt:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP

XP_022985192.1 (+)-gamma-cadinene synthase-like isoform X2 [Cucurbita maxima]6.5e-5978.57Show/hide
Query:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL
        +S++LIGMGDIVTN+++EWF R+PK+I A+ II RLMDD+VS KFEQ+R+HV S VECY EQYGC E EAC+ELHKQVVD WKDINEACLHPIDVPM IL
Subjt:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL

Query:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP
        MR+VNVSRV+NLLY DEDGYTNAN RTK LIESLLVNPMP
Subjt:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP

XP_022985195.1 (+)-gamma-cadinene synthase-like [Cucurbita maxima]1.0e-6487.86Show/hide
Query:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL
        +SISLIGMGDIVTN+VIEWF +RPKV++AA IIARLMDDLVSHKFEQQR+HVASAVECYMEQYGC ENEAC+ELHKQVVD WKDINEACLHPIDVPM IL
Subjt:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL

Query:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP
        MR+VNVSRV+NLLY DEDGYTNAN RTK LIESLLVNPMP
Subjt:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP

TrEMBL top hitse value%identityAlignment
A0A6J1EN57 (+)-gamma-cadinene synthase-like isoform X16.5e-5775.71Show/hide
Query:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL
        +S++LIGMGDIVTNE++EWF R+PK+I A+ II RLMDD++S KFEQ+R HV S VECYME+Y C E E CVE  KQVVD WKDINEACLHP+DVPM IL
Subjt:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL

Query:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP
        MR+VNVSRV+NLLY DEDGYTNAN RTK LIESLLVNPMP
Subjt:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP

A0A6J1EW93 (+)-gamma-cadinene synthase-like4.1e-5978.57Show/hide
Query:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL
        +SIS +GMGDIVTNEV+EW SRRPK+++A+ +I RLMDD+VSHKFEQ+R+HV SAVECYMEQYGC E EACVELHKQVVD WKDINEACL+PIDVPM IL
Subjt:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL

Query:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP
        MRVVN+SRV+N+LYLDEDGYTN + RTK LIESLLVN +P
Subjt:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP

A0A6J1J473 (+)-gamma-cadinene synthase-like isoform X23.1e-5978.57Show/hide
Query:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL
        +S++LIGMGDIVTN+++EWF R+PK+I A+ II RLMDD+VS KFEQ+R+HV S VECY EQYGC E EAC+ELHKQVVD WKDINEACLHPIDVPM IL
Subjt:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL

Query:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP
        MR+VNVSRV+NLLY DEDGYTNAN RTK LIESLLVNPMP
Subjt:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP

A0A6J1J7F9 (+)-gamma-cadinene synthase-like isoform X13.1e-5978.57Show/hide
Query:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL
        +S++LIGMGDIVTN+++EWF R+PK+I A+ II RLMDD+VS KFEQ+R+HV S VECY EQYGC E EAC+ELHKQVVD WKDINEACLHPIDVPM IL
Subjt:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL

Query:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP
        MR+VNVSRV+NLLY DEDGYTNAN RTK LIESLLVNPMP
Subjt:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP

A0A6J1JAP8 (+)-gamma-cadinene synthase-like5.0e-6587.86Show/hide
Query:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL
        +SISLIGMGDIVTN+VIEWF +RPKV++AA IIARLMDDLVSHKFEQQR+HVASAVECYMEQYGC ENEAC+ELHKQVVD WKDINEACLHPIDVPM IL
Subjt:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL

Query:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP
        MR+VNVSRV+NLLY DEDGYTNAN RTK LIESLLVNPMP
Subjt:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP

SwissProt top hitse value%identityAlignment
B2KSJ5 (+)-gamma-cadinene synthase2.3e-5167.38Show/hide
Query:  LSISLIGMGD-IVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSI
        +SIS +G+GD IVTNEV++W S  P++I+A+ II RLMDD+ SHKFEQ+R+HVASAVECYM+QY C E EAC+ELHK+VVD WKD NEA   P +VP+ +
Subjt:  LSISLIGMGD-IVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSI

Query:  LMRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP
        LMRV+N SRV+NLLYLDEDGYTNA   TK LI+SLLV+P+P
Subjt:  LMRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP

B5A435 Sesquiterpene synthase1.5e-3752.9Show/hide
Query:  SISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILM
        +IS +GMG+I + E  +W    P VIEA+  + RLMDD+ SHKFEQ+R HVAS +ECYM+QYG  E EA  E  KQ+V  WKDINE CL P  VP  +LM
Subjt:  SISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILM

Query:  RVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPM
        R++N++RV++++Y +EDGYT+     K  I SLL++PM
Subjt:  RVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPM

E3W207 Sesquiterpene synthase5.6e-3752.9Show/hide
Query:  SISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILM
        +IS +GMG I + E  EW    P +IEA+  I RLMDD+ SHKFEQ+R HVAS +ECYM+QYG +E EA  E HK++V  WKDINE  L P  VP  +LM
Subjt:  SISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILM

Query:  RVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPM
        R++N++RVM+++Y +ED YT+     K  I SLL++PM
Subjt:  RVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPM

F6M8H5 Probable sesquiterpene synthase9.5e-3752.17Show/hide
Query:  SISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILM
        +IS +GMG+I + E  +W    P VIEA+  + RLMDD  SHKFEQ+R HVAS +ECYM+QYG  E EA  E  K++V  WKDINE CL P  VP  +LM
Subjt:  SISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILM

Query:  RVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPM
        R++N++RV++++Y +EDGYT+     K  I SLL++PM
Subjt:  RVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPM

Q6Q3H3 (-)-germacrene D synthase2.5e-3752.55Show/hide
Query:  SLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILMRV
        S +GMGD VT E  +W   +PK++ A+ I+ RLMDD+V HKFEQ+R HVASAVECYM+Q+G  E E   E  + V + WKDINE CL P  VPM ILMRV
Subjt:  SLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILMRV

Query:  VNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP
        +N++RV++++Y +EDGYT+     K  + S+L++P+P
Subjt:  VNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP

Arabidopsis top hitse value%identityAlignment
AT1G48800.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein1.5e-2139.1Show/hide
Query:  LIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILMRVV
        L+GM +I   E  EW   R K++ A    ARL++DL  +K + +R +V +++ CY +QYG  E EA  +LH+ V D  K +NE  L PI+VP  +L  V+
Subjt:  LIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILMRVV

Query:  NVSRVMNLLYLDEDGYTNANDRTKCLIESLLVN
        +  R +N+ Y +EDG+T  N   K  I S+ V+
Subjt:  NVSRVMNLLYLDEDGYTNANDRTKCLIESLLVN

AT3G29410.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein3.1e-1934.53Show/hide
Query:  SISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILM
        S   I M D    ++ EWF  +PK+  A   + R+ +D+V+ + E  R  VA+ V CYM+Q+G  +  A  EL K   + +K + E  +    +P  IL+
Subjt:  SISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILM

Query:  RVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP
        R VN++RVM+L Y + DG+ + + +   LI SL ++P+P
Subjt:  RVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP

AT4G20200.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein2.8e-2036.36Show/hide
Query:  IGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILMRVVN
        + MG + T E  EW   RPK+++   I  RLM+DL+ ++ +  R +V +AV CYM+QYG  + EA  EL+K VV   K +NE  L    VP  +L   ++
Subjt:  IGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILMRVVN

Query:  VSRVMNLLYLDEDGYTNANDRTKCLIESLLVN
        ++R+M + Y   +G+TN   + K  + S+ V+
Subjt:  VSRVMNLLYLDEDGYTNANDRTKCLIESLLVN

AT5G23960.1 terpene synthase 211.1e-2437.86Show/hide
Query:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL
        ++++ + M D+   +  EW S  PK+  A+ II+R  DD+ S++FE +R+HVA+ ++CYM+Q+G  +  A   +   V D WKD+N+  + P   P  +L
Subjt:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL

Query:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP
        MRV+N+SRV+++ Y  +D YTN     K  I SLL+  +P
Subjt:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP

AT5G23960.2 terpene synthase 211.1e-2437.86Show/hide
Query:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL
        ++++ + M D+   +  EW S  PK+  A+ II+R  DD+ S++FE +R+HVA+ ++CYM+Q+G  +  A   +   V D WKD+N+  + P   P  +L
Subjt:  LSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSIL

Query:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP
        MRV+N+SRV+++ Y  +D YTN     K  I SLL+  +P
Subjt:  MRVVNVSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTATAAAGCTCAGCATTTCACTCATTGGTATGGGTGACATAGTAACAAATGAAGTAATTGAATGGTTTTCTAGAAGACCTAAAGTTATTGAAGCCGCAATAAT
AATTGCTAGACTCATGGATGACCTTGTTTCCCACAAGTTTGAGCAACAAAGAGATCACGTTGCTTCGGCGGTTGAATGTTACATGGAACAATATGGTTGTTTAGAGAACG
AAGCTTGCGTTGAACTTCATAAACAAGTTGTTGATGTCTGGAAGGACATAAATGAAGCATGTCTTCATCCAATCGATGTTCCAATGTCTATTCTTATGCGGGTTGTGAAT
GTTTCCAGAGTTATGAACCTTCTTTATTTGGATGAGGATGGATATACAAATGCAAATGATCGAACAAAATGTCTTATCGAATCTCTTCTCGTCAATCCAATGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTATAAAGCTCAGCATTTCACTCATTGGTATGGGTGACATAGTAACAAATGAAGTAATTGAATGGTTTTCTAGAAGACCTAAAGTTATTGAAGCCGCAATAAT
AATTGCTAGACTCATGGATGACCTTGTTTCCCACAAGTTTGAGCAACAAAGAGATCACGTTGCTTCGGCGGTTGAATGTTACATGGAACAATATGGTTGTTTAGAGAACG
AAGCTTGCGTTGAACTTCATAAACAAGTTGTTGATGTCTGGAAGGACATAAATGAAGCATGTCTTCATCCAATCGATGTTCCAATGTCTATTCTTATGCGGGTTGTGAAT
GTTTCCAGAGTTATGAACCTTCTTTATTTGGATGAGGATGGATATACAAATGCAAATGATCGAACAAAATGTCTTATCGAATCTCTTCTCGTCAATCCAATGCCTTGA
Protein sequenceShow/hide protein sequence
MGIIKLSISLIGMGDIVTNEVIEWFSRRPKVIEAAIIIARLMDDLVSHKFEQQRDHVASAVECYMEQYGCLENEACVELHKQVVDVWKDINEACLHPIDVPMSILMRVVN
VSRVMNLLYLDEDGYTNANDRTKCLIESLLVNPMP