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CmoCh16G008910 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G008910
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 4
Genome locationCmo_Chr16:5010132..5013807
RNA-Seq ExpressionCmoCh16G008910
SyntenyCmoCh16G008910
Gene Ontology termsGO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0031966 - mitochondrial membrane (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsIPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AIE42595.1 NADH dehydrogenase subunit 4 [Raphanus sativus]3.4e-1295Show/hide
Query:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        GIGGSILLMLSHGLVPSALFLCVGVLYDRHKT+LV+YYGG
Subjt:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
GEV73883.1 NADH dehydrogenase subunit 4, mitochondrial [Tanacetum cinerariifolium]9.9e-1292.5Show/hide
Query:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        GIGGSILLMLSHGLVPSALFLCVGVLYD+HKT+LV+YYGG
Subjt:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
KAG6585907.1 NADH-ubiquinone oxidoreductase chain 4, partial [Cucurbita argyrosperma subsp. sororia]3.4e-1295Show/hide
Query:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        GIGGSILLMLSHGLVPSALFLCVGVLYDRHKT+LV+YYGG
Subjt:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
PRQ15629.1 putative NADH:ubiquinone reductase (H(+)-translocating) [Rosa chinensis]4.4e-1270.18Show/hide
Query:  QPENEVKLESR-MIGGVGIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        +P+    +  R M   +GIGGSIL MLSHGLVPSALFLCVGVLYDRHKT+LV+YYGG
Subjt:  QPENEVKLESR-MIGGVGIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
YP_009167259.1 NADH dehydrogenase subunit 4 [Ginkgo biloba]1.3e-1195Show/hide
Query:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        GIGGSILLMLSHGLV SALFLCVGVLYDRHKT+LVKYYGG
Subjt:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
TrEMBL top hitse value%identityAlignment
A0A0N7AS80 NADH-ubiquinone oxidoreductase chain 46.2e-1295Show/hide
Query:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        GIGGSILLMLSHGLV SALFLCVGVLYDRHKT+LVKYYGG
Subjt:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
A0A2P6P129 NADH-ubiquinone oxidoreductase chain 42.1e-1270.18Show/hide
Query:  QPENEVKLESR-MIGGVGIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        +P+    +  R M   +GIGGSIL MLSHGLVPSALFLCVGVLYDRHKT+LV+YYGG
Subjt:  QPENEVKLESR-MIGGVGIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
A0A4U5PYN3 NADH-ubiquinone oxidoreductase chain 4 (Mitochondrion)6.2e-1267.21Show/hide
Query:  DRAEQPENEVKLESRMIGGV-GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        +R  + E  +  ES  +  + GIGGSIL MLSHGLVPSALFLCVGVLYDRHKT+LV+YYGG
Subjt:  DRAEQPENEVKLESRMIGGV-GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
A0A6N2KW01 Proton_antipo_M domain-containing protein1.1e-1956.52Show/hide
Query:  PIGPATTPQNGSSCGTFSFWQLRSLILPLIDRAEQPENEVKLESRMIGG-------------------------VGIGGSILLMLSHGLVPSALFLCVGV
        PIG    P  GS         L SLILP IDR E+PE EVKLESRMI G                          GIGGSIL MLSHGLVPSALFLCVGV
Subjt:  PIGPATTPQNGSSCGTFSFWQLRSLILPLIDRAEQPENEVKLESRMIGG-------------------------VGIGGSILLMLSHGLVPSALFLCVGV

Query:  LYDRHKTQLVKYYGG
        LYDRHKT+LV+YYGG
Subjt:  LYDRHKTQLVKYYGG
J7M266 NADH-ubiquinone oxidoreductase chain 41.6e-1295Show/hide
Query:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        GIGGSILLMLSHGLVPSALFLCVGVLYDRHKT+LV+YYGG
Subjt:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
SwissProt top hitse value%identityAlignment
P26848 NADH-ubiquinone oxidoreductase chain 47.1e-1387.5Show/hide
Query:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        GI GSILLMLSHGLV SALFLCVG LYDRHKT++VKYYGG
Subjt:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
P27572 NADH-ubiquinone oxidoreductase chain 43.8e-1492.5Show/hide
Query:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        GIGGSILLMLSHGLV SALFLCVGVLYDRHKT+LV+YYGG
Subjt:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
P48915 NADH-ubiquinone oxidoreductase chain 41.3e-1180Show/hide
Query:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        GI GSILLMLSHGLV SALFLC+GVLYDR+KT+++KYY G
Subjt:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
P93313 NADH-ubiquinone oxidoreductase chain 43.8e-1492.5Show/hide
Query:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        GIGGSILLMLSHGLV SALFLCVGVLYDRHKT+LV+YYGG
Subjt:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
Q04050 NADH-ubiquinone oxidoreductase chain 42.9e-1492.5Show/hide
Query:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        GIGGSIL MLSHGLVPSALFLCVGVLYDRHKT+LV+YYGG
Subjt:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
Arabidopsis top hitse value%identityAlignment
ATMG00580.1 NADH dehydrogenase subunit 42.0e-1592.5Show/hide
Query:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG
        GIGGSIL MLSHGLVPSALFLCVGVLYDRHKT+LV+YYGG
Subjt:  GIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTGCATGACCCTTGCAGATTTGACTCTATCTACACTCGGAGCCAATCCCCTATCGGTCCTGCCACCACGCCGCAGAACGGGAGCTCGTGTGGAACCTTTTCTTT
CTGGCAACTGCGATCTCTTATACTACCATTGATCGACAGAGCAGAACAACCAGAAAATGAAGTGAAGTTAGAAAGTCGTATGATAGGTGGGGTGGGAATTGGAGGTAGCA
TTCTACTGATGTTAAGTCATGGACTGGTTCCTTCAGCCCTTTTTCTATGTGTTGGGGTTCTATATGACCGACATAAGACTCAACTCGTTAAATATTACGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTTGCATGACCCTTGCAGATTTGACTCTATCTACACTCGGAGCCAATCCCCTATCGGTCCTGCCACCACGCCGCAGAACGGGAGCTCGTGTGGAACCTTTTCTTT
CTGGCAACTGCGATCTCTTATACTACCATTGATCGACAGAGCAGAACAACCAGAAAATGAAGTGAAGTTAGAAAGTCGTATGATAGGTGGGGTGGGAATTGGAGGTAGCA
TTCTACTGATGTTAAGTCATGGACTGGTTCCTTCAGCCCTTTTTCTATGTGTTGGGGTTCTATATGACCGACATAAGACTCAACTCGTTAAATATTACGGAGGTTGA
Protein sequenceShow/hide protein sequence
MYLHDPCRFDSIYTRSQSPIGPATTPQNGSSCGTFSFWQLRSLILPLIDRAEQPENEVKLESRMIGGVGIGGSILLMLSHGLVPSALFLCVGVLYDRHKTQLVKYYGG