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CmoCh16G008930 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G008930
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDUF4228 domain protein
Genome locationCmo_Chr16:5114350..5114655
RNA-Seq ExpressionCmoCh16G008930
SyntenyCmoCh16G008930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577418.1 hypothetical protein SDJN03_24992, partial [Cucurbita argyrosperma subsp. sororia]8.3e-4598.06Show/hide
Query:  MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADDGASRG--TTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSIP
        MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADDGASRG  TTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSIP
Subjt:  MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADDGASRG--TTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSIP

Query:  ELC
        ELC
Subjt:  ELC

XP_022151029.1 uncharacterized protein LOC111019048 [Momordica charantia]3.7e-2973.58Show/hide
Query:  MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADD---GASRGTT---TTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSL
        MGNCTSNKY AE  PMS+EEE VETVKR+L  DD   GA R ++   TTEVKIR+TKRELEKLL KV+VEELPVTELL Q+I+VGD  ESTHRRSWRPSL
Subjt:  MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADD---GASRGTT---TTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSL

Query:  QSIPEL
        Q+I EL
Subjt:  QSIPEL

XP_022932152.1 uncharacterized protein LOC111438472 [Cucurbita moschata]2.6e-46100Show/hide
Query:  MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADDGASRGTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSIPEL
        MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADDGASRGTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSIPEL
Subjt:  MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADDGASRGTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSIPEL

Query:  C
        C
Subjt:  C

XP_022985276.1 uncharacterized protein LOC111483315 [Cucurbita maxima]1.0e-4291.51Show/hide
Query:  MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADDGASRG-----TTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQ
        MGNCTSNKYLAETMPMSEEEE+VET+KRKLNADDGASR      TTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQ+IEVGDESESTHRRSWRPSLQ
Subjt:  MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADDGASRG-----TTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQ

Query:  SIPELC
        SIPELC
Subjt:  SIPELC

XP_038904231.1 uncharacterized protein LOC120090574 [Benincasa hispida]1.8e-3176.7Show/hide
Query:  MGNCTSNKYLAETMPMS-EEEEVVETVKRKLNADDGASR--GTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSI
        MGNCTSNKYLAETMPMS E+EE VETV+R+L   DGA +    TTTE+KIR+TKRELEKLLSKV+VEELPVTELL Q+I+VGD  ESTH+RSWRPSLQSI
Subjt:  MGNCTSNKYLAETMPMS-EEEEVVETVKRKLNADDGASR--GTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSI

Query:  PEL
        PE+
Subjt:  PEL

TrEMBL top hitse value%identityAlignment
A0A1S3CJ77 uncharacterized protein LOC1035015803.8e-2767.96Show/hide
Query:  MGNCTSNKYLAETMPMS-EEEEVVETVKRKLNADDGASR--GTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSI
        MGNCTSNKYLAETMPMS +EEEV E ++R+L  +  A +   +TTTE+KIR+TK+ELEKLL KV++EELPV ELL ++I+VGD  ESTHRRSW+PSLQSI
Subjt:  MGNCTSNKYLAETMPMS-EEEEVVETVKRKLNADDGASR--GTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSI

Query:  PEL
        PE+
Subjt:  PEL

A0A5D3BTQ9 DUF4228 domain protein3.8e-2767.96Show/hide
Query:  MGNCTSNKYLAETMPMS-EEEEVVETVKRKLNADDGASR--GTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSI
        MGNCTSNKYLAETMPMS +EEEV E ++R+L  +  A +   +TTTE+KIR+TK+ELEKLL KV++EELPV ELL ++I+VGD  ESTHRRSW+PSLQSI
Subjt:  MGNCTSNKYLAETMPMS-EEEEVVETVKRKLNADDGASR--GTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSI

Query:  PEL
        PE+
Subjt:  PEL

A0A6J1DBT0 uncharacterized protein LOC1110190481.8e-2973.58Show/hide
Query:  MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADD---GASRGTT---TTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSL
        MGNCTSNKY AE  PMS+EEE VETVKR+L  DD   GA R ++   TTEVKIR+TKRELEKLL KV+VEELPVTELL Q+I+VGD  ESTHRRSWRPSL
Subjt:  MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADD---GASRGTT---TTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSL

Query:  QSIPEL
        Q+I EL
Subjt:  QSIPEL

A0A6J1EVV2 uncharacterized protein LOC1114384721.2e-46100Show/hide
Query:  MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADDGASRGTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSIPEL
        MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADDGASRGTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSIPEL
Subjt:  MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADDGASRGTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSIPEL

Query:  C
        C
Subjt:  C

A0A6J1J7P7 uncharacterized protein LOC1114833154.9e-4391.51Show/hide
Query:  MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADDGASRG-----TTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQ
        MGNCTSNKYLAETMPMSEEEE+VET+KRKLNADDGASR      TTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQ+IEVGDESESTHRRSWRPSLQ
Subjt:  MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADDGASRG-----TTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQ

Query:  SIPELC
        SIPELC
Subjt:  SIPELC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.6.8e-0542.37Show/hide
Query:  EVKIRMTKRELEKLLSKVEVEELPVTELLLQ--MIEVGDESESTHRRSWRPSLQSIPEL
        E+KIR+TK++L  LLSKV V +L   +      ++      E+  +R WRP LQSIPE+
Subjt:  EVKIRMTKRELEKLLSKVEVEELPVTELLLQ--MIEVGDESESTHRRSWRPSLQSIPEL

AT4G21920.1 unknown protein1.4e-0537.5Show/hide
Query:  ASRGTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMI-EVGDE------SESTHRRSWRPSLQSIPEL
        +S  +   E+KIR+TK+ELE L+  + ++ L   E+L ++I E GD+        + H + W+P LQSIPE+
Subjt:  ASRGTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMI-EVGDE------SESTHRRSWRPSLQSIPEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTGTACAAGCAACAAATATTTGGCAGAGACAATGCCGATGAGTGAGGAGGAGGAGGTTGTGGAGACGGTGAAGAGGAAGCTGAATGCCGATGACGGTGCTTC
GAGAGGGACGACGACGACGGAGGTCAAGATTAGGATGACAAAGAGAGAGCTGGAGAAGTTATTGAGCAAAGTGGAAGTGGAGGAGCTGCCAGTGACGGAGCTGTTATTGC
AGATGATTGAGGTTGGGGATGAGTCGGAGAGTACTCATCGGCGATCATGGCGACCATCTTTGCAAAGCATTCCTGAGCTGTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTGTACAAGCAACAAATATTTGGCAGAGACAATGCCGATGAGTGAGGAGGAGGAGGTTGTGGAGACGGTGAAGAGGAAGCTGAATGCCGATGACGGTGCTTC
GAGAGGGACGACGACGACGGAGGTCAAGATTAGGATGACAAAGAGAGAGCTGGAGAAGTTATTGAGCAAAGTGGAAGTGGAGGAGCTGCCAGTGACGGAGCTGTTATTGC
AGATGATTGAGGTTGGGGATGAGTCGGAGAGTACTCATCGGCGATCATGGCGACCATCTTTGCAAAGCATTCCTGAGCTGTGCTGA
Protein sequenceShow/hide protein sequence
MGNCTSNKYLAETMPMSEEEEVVETVKRKLNADDGASRGTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQMIEVGDESESTHRRSWRPSLQSIPELC