; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G008950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G008950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description2-iminobutanoate/2-iminopropanoate deaminase-like
Genome locationCmo_Chr16:5194913..5197262
RNA-Seq ExpressionCmoCh16G008950
SyntenyCmoCh16G008950
Gene Ontology termsGO:1901565 - organonitrogen compound catabolic process (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0019239 - deaminase activity (molecular function)
InterPro domainsIPR006056 - RidA family
IPR006175 - YjgF/YER057c/UK114 family
IPR019897 - RidA, conserved site
IPR035959 - RutC-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577420.1 Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.4e-9799.46Show/hide
Query:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSE+PFPARSTFQVGALPKNAKIEIDAIALV
Subjt:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV

KAG6577421.1 Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-9092.43Show/hide
Query:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYC++++FQIPA+NVISRPRTVTPSVGA+VSLWRRPSSIPSISNRNMSFKCHAISKC DI PI T+EAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVGDQT QAL+NIGAIL+AGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQ+GALPKNAKIEIDAIALV
Subjt:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV

KAG7015494.1 Reactive Intermediate Deaminase A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.7e-9494.36Show/hide
Query:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARY----------FSEKPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYAR           FSEKPFPARSTFQVGALPKNAKIEIDAIALV
Subjt:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARY----------FSEKPFPARSTFQVGALPKNAKIEIDAIALV

XP_022932153.1 2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita moschata]1.2e-97100Show/hide
Query:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV
Subjt:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV

XP_023552960.1 2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita pepo subsp. pepo]1.3e-9194.05Show/hide
Query:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCT+HTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAIS+C+DITPI TEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVGDQT QALKNIGAILKAGG DYNRVVKTTIMLADVADFALVNEIYA+YFSE P PARSTFQ GALPKNAKIEIDAIA+V
Subjt:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV

TrEMBL top hitse value%identityAlignment
A0A0A0L6A5 Plastid-lipid associated protein4.3e-6973.8Show/hide
Query:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPS-SIPSISNRNMSFKCHAISKC-NDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPET
        MA   +HT QIPAS  I+R R++TPS   AVSLWRRPS +IPSIS+R MSFKCHAISKC  +I  I T+ APEALGPYSQGIIANN ++VSGSLGLIPET
Subjt:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPS-SIPSISNRNMSFKCHAISKC-NDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPET

Query:  GELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV
        G+LISD VG+QT QALKN+GAIL+AGGADY+RV+KTTIMLA+VADF LVNEIY +YF   P PARSTF  GALPKNAKIEIDAIA++
Subjt:  GELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV

A0A6J1EVW2 2-iminobutanoate/2-iminopropanoate deaminase-like7.5e-9091.89Show/hide
Query:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYC++++FQIPA+NVISRPRTVTPSVGA+VSLWRRPSSIPSISNRNMSFKCHAISKC DI PI T+EAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVGDQ  QAL+NIGAIL+AGGADYNRVVKTTIMLADVADFALVNEIYARYFSE+PFPARSTFQVGALPKNAKIEIDAIALV
Subjt:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV

A0A6J1F0U9 2-iminobutanoate/2-iminopropanoate deaminase-like5.7e-98100Show/hide
Query:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV
Subjt:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV

A0A6J1JD57 2-iminobutanoate/2-iminopropanoate deaminase-like4.4e-9092.97Show/hide
Query:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCT+HTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKC+DIT I T EAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVG+Q  QALKNIGAILKAGGADYNRVVKTTIMLADVADFALVN+IYARYFSE P PARSTFQ GALPKNAKIEIDAIA+V
Subjt:  LISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV

A0RZC7 Plastid-lipid associated protein1.5e-6973.8Show/hide
Query:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPS-SIPSISNRNMSFKCHAISKC-NDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPET
        MA   +HT QIPAS  I+R R++TPS G AVSLWRRPS +IPSIS+  MSFKCHAISKC  +I  I T+ APEALGPYSQGIIANN ++VSGSLGLIPET
Subjt:  MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPS-SIPSISNRNMSFKCHAISKC-NDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPET

Query:  GELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV
        G+LISD VG+QT QALKN+GAIL+AGGADY+RV+KTTIMLA+VADF LVNEIY +YF   P PARSTF  GALPKNAKIEIDAIA++
Subjt:  GELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV

SwissProt top hitse value%identityAlignment
P52758 2-iminobutanoate/2-iminopropanoate deaminase2.0e-3152.07Show/hide
Query:  IITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPAR
        I T +AP A+GPYSQ ++ +  I++SG +G+ P +G+L+S  V ++  QALKN+G ILKA G D+  VVKTT++LAD+ DF  VNEIY +YF    FPAR
Subjt:  IITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPAR

Query:  STFQVGALPKNAKIEIDAIAL
        + +QV ALPK ++IEI+A+A+
Subjt:  STFQVGALPKNAKIEIDAIAL

P80601 2-iminobutanoate/2-iminopropanoate deaminase1.4e-2949.59Show/hide
Query:  IITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPAR
        I T +AP A+GPYSQ ++ +  I++SG LG+ P +G+L+   V ++  QAL NIG ILKA G D+  VVK T++LAD+ DF+ VN++Y +YF +  FPAR
Subjt:  IITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPAR

Query:  STFQVGALPKNAKIEIDAIAL
        + +QV ALPK  ++EI+AIA+
Subjt:  STFQVGALPKNAKIEIDAIAL

Q10121 RutC family protein C23G10.26.9e-3255.37Show/hide
Query:  IITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPAR
        I +  AP A+GPYSQ + A N I++SGSLGL P+TG+L  + V +QT Q+LKN+G +LKA GADY  VVKTT++L ++ADFA VNE+Y +YF + P+PAR
Subjt:  IITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPAR

Query:  STFQVGALPKNAKIEIDAIAL
        + +QV ALPK   +EI+A+A+
Subjt:  STFQVGALPKNAKIEIDAIAL

Q3T114 2-iminobutanoate/2-iminopropanoate deaminase6.4e-3049.59Show/hide
Query:  IITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPAR
        I T +AP A+GPYSQ ++ +  I++SG LG+ P +G+L+   V ++  QAL NIG ILKA G D+  VVK T++LAD+ DF+ VN++Y +YF +  FPAR
Subjt:  IITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPAR

Query:  STFQVGALPKNAKIEIDAIAL
        + +QV ALPK  ++EI+AIA+
Subjt:  STFQVGALPKNAKIEIDAIAL

Q94JQ4 Reactive Intermediate Deaminase A, chloroplastic6.2e-4160Show/hide
Query:  AAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADY
        A VSL+R  S  P  +  ++S    ++ K      + TE+AP ALGPYSQ I ANN +F+SG LGLIPETG+ +S+ V DQT Q LKN+G ILKA GADY
Subjt:  AAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADY

Query:  NRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIA
        + VVKTTIMLAD+ADF  VNEIYA+YF   P PARST+QV ALP NAKIEI+ IA
Subjt:  NRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIA

Arabidopsis top hitse value%identityAlignment
AT3G20390.1 endoribonuclease L-PSP family protein4.4e-4260Show/hide
Query:  AAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADY
        A VSL+R  S  P  +  ++S    ++ K      + TE+AP ALGPYSQ I ANN +F+SG LGLIPETG+ +S+ V DQT Q LKN+G ILKA GADY
Subjt:  AAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAILKAGGADY

Query:  NRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIA
        + VVKTTIMLAD+ADF  VNEIYA+YF   P PARST+QV ALP NAKIEI+ IA
Subjt:  NRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTACTGCACGTCTCACACCTTCCAAATTCCGGCCTCCAACGTCATTTCACGGCCGCGCACTGTCACTCCCTCTGTCGGCGCCGCCGTGTCCTTGTGGCGC
CGCCCTTCATCTATTCCATCTATTTCAAACCGCAACATGTCCTTCAAATGCCACGCCATTTCCAAGTGTAATGATATCACACCTATTATAACCGAAGAGGCTCCA
GAAGCATTAGGGCCATATTCTCAAGGCATCATAGCCAACAACTTTATATTTGTGTCTGGCTCCCTAGGTCTTATTCCCGAGACAGGAGAATTAATTTCCGATCAC
GTTGGAGACCAAACTGTGCAGGCCCTCAAAAATATAGGAGCAATATTGAAAGCTGGAGGTGCGGACTATAATAGAGTGGTTAAGACAACTATTATGCTGGCTGAT
GTAGCAGACTTTGCATTAGTGAATGAAATTTATGCTCGATACTTCTCCGAGAAACCTTTTCCAGCTCGGTCAACATTTCAGGTTGGAGCGTTGCCCAAAAATGCC
AAGATTGAAATCGATGCAATAGCTTTGGTTTAA
mRNA sequenceShow/hide mRNA sequence
CTCATCCACTCACTCACTGCCAATTAAACTGTAGACGTATGGCTTACTGCACGTCTCACACCTTCCAAATTCCGGCCTCCAACGTCATTTCACGGCCGCGCACTG
TCACTCCCTCTGTCGGCGCCGCCGTGTCCTTGTGGCGCCGCCCTTCATCTATTCCATCTATTTCAAACCGCAACATGTCCTTCAAATGCCACGCCATTTCCAAGT
GTAATGATATCACACCTATTATAACCGAAGAGGCTCCAGAAGCATTAGGGCCATATTCTCAAGGCATCATAGCCAACAACTTTATATTTGTGTCTGGCTCCCTAG
GTCTTATTCCCGAGACAGGAGAATTAATTTCCGATCACGTTGGAGACCAAACTGTGCAGGCCCTCAAAAATATAGGAGCAATATTGAAAGCTGGAGGTGCGGACT
ATAATAGAGTGGTTAAGACAACTATTATGCTGGCTGATGTAGCAGACTTTGCATTAGTGAATGAAATTTATGCTCGATACTTCTCCGAGAAACCTTTTCCAGCTC
GGTCAACATTTCAGGTTGGAGCGTTGCCCAAAAATGCCAAGATTGAAATCGATGCAATAGCTTTGGTTTAAACTGTAGTACCTCGACCTGACATGAGCACGGGTT
GTGAAGTATCTGATATATTAGTATGGTTTTAAATTTAATAAGTTGGAGATGGCTAAATAGAGGAAGATCCCAAATTAGATGAGGGTTTCTTGCTGGTTGTTACCA
ACATTATTGTAATAATTTTATTATCTCATGGACATATGCTTTTTAAGCTGTGGAAATAGAGCTAATAAAAGATATTGTTGCCTTGTTTTATGTGGGGGCCTTTCT
CATGCTACCATGGTTACTCCTGCAAAATTTCT
Protein sequenceShow/hide protein sequence
MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCNDITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDH
VGDQTVQALKNIGAILKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEIDAIALV