; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G008960 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G008960
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description2-iminobutanoate/2-iminopropanoate deaminase-like
Genome locationCmo_Chr16:5204595..5206074
RNA-Seq ExpressionCmoCh16G008960
SyntenyCmoCh16G008960
Gene Ontology termsGO:1901565 - organonitrogen compound catabolic process (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0019239 - deaminase activity (molecular function)
InterPro domainsIPR006056 - RidA family
IPR006175 - YjgF/YER057c/UK114 family
IPR019897 - RidA, conserved site
IPR035959 - RutC-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577420.1 Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.2e-8790.81Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYC++++FQIPA+NVISRPRTVTPSVGA+VSLWRRPSSIPSISNRNMSFKCHAISKC DI PI T+EAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGD---QPSRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVGD   Q  +NIGAIL+AGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV
Subjt:  LISDHVGD---QPSRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV

KAG6577421.1 Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.5e-9296.22Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVGDQ     RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSE+PFPARSTFQ+GALPKNAKIEIDAIALV
Subjt:  LISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV

KAG7015495.1 Reactive Intermediate Deaminase A, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-9195.14Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNR+MSFKCHAISKCRDII IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVGDQ     RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSE+PFPARSTFQ+GALPKNAKIEIDAIALV
Subjt:  LISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV

XP_022932162.1 2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita moschata]6.0e-9497.84Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVGDQP    RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV
Subjt:  LISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV

XP_023553271.1 2-iminobutanoate/2-iminopropanoate deaminase-like [Cucurbita pepo subsp. pepo]1.5e-8994.05Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIET +APEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV
        LISD VG+Q     +NIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFS+QPFPARSTFQVGALPKNAKIEIDAIALV
Subjt:  LISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV

TrEMBL top hitse value%identityAlignment
A0A0A0L6A5 Plastid-lipid associated protein2.4e-6470.59Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPS-SIPSISNRNMSFKCHAISKC-RDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPET
        MA  +A++ QIPA+  I+R R++TPS   +VSLWRRPS +IPSIS+R MSFKCHAISKC  +II I T  APEALGPYSQGIIANN ++VSGSLGLIPET
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPS-SIPSISNRNMSFKCHAISKC-RDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPET

Query:  GELISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV
        G+LISD VG+Q     +N+GAILRAGGADY+RV+KTTIMLA+VADF LVNEIY +YF   P PARSTF  GALPKNAKIEIDAIA++
Subjt:  GELISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV

A0A6J1EVW2 2-iminobutanoate/2-iminopropanoate deaminase-like2.9e-9497.84Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVGDQP    RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV
Subjt:  LISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV

A0A6J1F0U9 2-iminobutanoate/2-iminopropanoate deaminase-like4.5e-8790.27Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYC++++FQIPA+NVISRPRTVTPSVGA+VSLWRRPSSIPSISNRNMSFKCHAISKC DI PI T+EAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGD---QPSRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVGD   Q  +NIGAIL+AGGADYNRVVKTTIMLADVADFALVNEIYARYFSE+PFPARSTFQVGALPKNAKIEIDAIALV
Subjt:  LISDHVGD---QPSRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV

A0A6J1JD57 2-iminobutanoate/2-iminopropanoate deaminase-like1.6e-8488.11Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
        MAYC+A++FQIPA+NVISRPRTVTPSVGA+VSLWRRPSSIPSISNRNMSFKCHAISKC DI  IET EAPEALGPYSQGIIANNFIFVSGSLGLIPETGE
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGE

Query:  LISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV
        LISDHVG+Q     +NIGAIL+AGGADYNRVVKTTIMLADVADFALVN+IYARYFSE P PARSTFQ GALPKNAKIEIDAIA+V
Subjt:  LISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV

A0RZC7 Plastid-lipid associated protein8.2e-6570.59Show/hide
Query:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPS-SIPSISNRNMSFKCHAISKC-RDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPET
        MA  +A++ QIPA+  I+R R++TPS G +VSLWRRPS +IPSIS+  MSFKCHAISKC  +II I T  APEALGPYSQGIIANN ++VSGSLGLIPET
Subjt:  MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPS-SIPSISNRNMSFKCHAISKC-RDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPET

Query:  GELISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV
        G+LISD VG+Q     +N+GAILRAGGADY+RV+KTTIMLA+VADF LVNEIY +YF   P PARSTF  GALPKNAKIEIDAIA++
Subjt:  GELISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV

SwissProt top hitse value%identityAlignment
P52758 2-iminobutanoate/2-iminopropanoate deaminase2.7e-2848.76Show/hide
Query:  IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGD---QPSRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPAR
        I T +AP A+GPYSQ ++ +  I++SG +G+ P +G+L+S  V +   Q  +N+G IL+A G D+  VVKTT++LAD+ DF  VNEIY +YF    FPAR
Subjt:  IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGD---QPSRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPAR

Query:  STFQVGALPKNAKIEIDAIAL
        + +QV ALPK ++IEI+A+A+
Subjt:  STFQVGALPKNAKIEIDAIAL

P80601 2-iminobutanoate/2-iminopropanoate deaminase8.5e-2746.28Show/hide
Query:  IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPSR---NIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPAR
        I T +AP A+GPYSQ ++ +  I++SG LG+ P +G+L+   V ++  +   NIG IL+A G D+  VVK T++LAD+ DF+ VN++Y +YF +  FPAR
Subjt:  IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPSR---NIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPAR

Query:  STFQVGALPKNAKIEIDAIAL
        + +QV ALPK  ++EI+AIA+
Subjt:  STFQVGALPKNAKIEIDAIAL

Q10121 RutC family protein C23G10.29.1e-2951.67Show/hide
Query:  IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGD--QPSRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARS
        I +  AP A+GPYSQ + A N I++SGSLGL P+TG+L    V    Q  +N+G +L+A GADY  VVKTT++L ++ADFA VNE+Y +YF + P+PAR+
Subjt:  IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGD--QPSRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARS

Query:  TFQVGALPKNAKIEIDAIAL
         +QV ALPK   +EI+A+A+
Subjt:  TFQVGALPKNAKIEIDAIAL

Q3T114 2-iminobutanoate/2-iminopropanoate deaminase3.8e-2746.28Show/hide
Query:  IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPSR---NIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPAR
        I T +AP A+GPYSQ ++ +  I++SG LG+ P +G+L+   V ++  +   NIG IL+A G D+  VVK T++LAD+ DF+ VN++Y +YF +  FPAR
Subjt:  IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPSR---NIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPAR

Query:  STFQVGALPKNAKIEIDAIAL
        + +QV ALPK  ++EI+AIA+
Subjt:  STFQVGALPKNAKIEIDAIAL

Q94JQ4 Reactive Intermediate Deaminase A, chloroplastic3.1e-3756.77Show/hide
Query:  ASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPS---RNIGAILRAGGADY
        A VSL+R  S  P  ++ ++S    A S  +++  + T++AP ALGPYSQ I ANN +F+SG LGLIPETG+ +S+ V DQ     +N+G IL+A GADY
Subjt:  ASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPS---RNIGAILRAGGADY

Query:  NRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA
        + VVKTTIMLAD+ADF  VNEIYA+YF   P PARST+QV ALP NAKIEI+ IA
Subjt:  NRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA

Arabidopsis top hitse value%identityAlignment
AT3G20390.1 endoribonuclease L-PSP family protein2.2e-3856.77Show/hide
Query:  ASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPS---RNIGAILRAGGADY
        A VSL+R  S  P  ++ ++S    A S  +++  + T++AP ALGPYSQ I ANN +F+SG LGLIPETG+ +S+ V DQ     +N+G IL+A GADY
Subjt:  ASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPS---RNIGAILRAGGADY

Query:  NRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA
        + VVKTTIMLAD+ADF  VNEIYA+YF   P PARST+QV ALP NAKIEI+ IA
Subjt:  NRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTACTGCTCAGCAAACAGCTTCCAAATCCCGGCCACCAACGTCATTTCACGGCCGCGCACTGTCACTCCCTCTGTCGGCGCCTCCGTCTCCTTGTGGCGCCGCCC
TTCTTCTATTCCATCTATTTCAAACCGCAACATGTCCTTCAAATGCCATGCCATTTCCAAGTGTCGTGATATCATACCTATTGAAACCAAAGAGGCTCCAGAAGCATTGG
GGCCATATTCTCAAGGCATCATTGCCAACAACTTTATATTTGTGTCTGGCTCCCTAGGTCTGATTCCCGAGACAGGAGAATTAATTTCTGATCATGTTGGAGACCAACCG
AGCAGAAATATAGGTGCAATATTGAGAGCTGGAGGTGCAGACTATAATAGAGTGGTTAAGACAACTATTATGCTGGCTGATGTAGCAGACTTTGCATTAGTGAATGAAAT
TTATGCTCGATACTTTTCCGAGCAACCTTTTCCAGCTCGGTCAACATTTCAGGTTGGAGCGTTGCCCAAAAATGCCAAGATCGAAATCGATGCAATAGCTTTGGTTTAA
mRNA sequenceShow/hide mRNA sequence
TGTAAACCTATGGCTTACTGCTCAGCAAACAGCTTCCAAATCCCGGCCACCAACGTCATTTCACGGCCGCGCACTGTCACTCCCTCTGTCGGCGCCTCCGTCTCCTTGTG
GCGCCGCCCTTCTTCTATTCCATCTATTTCAAACCGCAACATGTCCTTCAAATGCCATGCCATTTCCAAGTGTCGTGATATCATACCTATTGAAACCAAAGAGGCTCCAG
AAGCATTGGGGCCATATTCTCAAGGCATCATTGCCAACAACTTTATATTTGTGTCTGGCTCCCTAGGTCTGATTCCCGAGACAGGAGAATTAATTTCTGATCATGTTGGA
GACCAACCGAGCAGAAATATAGGTGCAATATTGAGAGCTGGAGGTGCAGACTATAATAGAGTGGTTAAGACAACTATTATGCTGGCTGATGTAGCAGACTTTGCATTAGT
GAATGAAATTTATGCTCGATACTTTTCCGAGCAACCTTTTCCAGCTCGGTCAACATTTCAGGTTGGAGCGTTGCCCAAAAATGCCAAGATCGAAATCGATGCAATAGCTT
TGGTTTAAACTGTAGTACCTCGACCTGACATGAGCACAGGTTGTGAAGTATCCGATATATTAGTATGGTTTCTTGCTGGTTGTTACCAACATTATTGTAATAATTTTATT
ATCTCATGGAC
Protein sequenceShow/hide protein sequence
MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQP
SRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV