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CmoCh16G009290 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G009290
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSpindle pole body component protein
Genome locationCmo_Chr16:5753424..5754257
RNA-Seq ExpressionCmoCh16G009290
SyntenyCmoCh16G009290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577452.1 hypothetical protein SDJN03_25026, partial [Cucurbita argyrosperma subsp. sororia]1.8e-5595.24Show/hide
Query:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRYAKSGI
        GS DGEARGVNGRSNSNDFR + + I
Subjt:  GSRDGEARGVNGRSNSNDFRYAKSGI

KAG7015524.1 hypothetical protein SDJN02_23160 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-5595.24Show/hide
Query:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSRLE PEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRYAKSGI
        GSRDGEARGVNGRSNSNDFR + + I
Subjt:  GSRDGEARGVNGRSNSNDFRYAKSGI

XP_022932132.1 uncharacterized protein LOC111438455 [Cucurbita moschata]2.8e-5696.03Show/hide
Query:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRYAKSGI
        GSRDGEARGVNGRSNSNDFR + + I
Subjt:  GSRDGEARGVNGRSNSNDFRYAKSGI

XP_022985273.1 uncharacterized protein LOC111483313 [Cucurbita maxima]6.9e-5594.44Show/hide
Query:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPI TRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTA SERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRYAKSGI
        GSRDGEARGVNGRSNSNDFR + + I
Subjt:  GSRDGEARGVNGRSNSNDFRYAKSGI

XP_038905048.1 uncharacterized protein LOC120091204 [Benincasa hispida]2.1e-4884.68Show/hide
Query:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSR+ENPE T APGV+E++SLAPITTRKHRRRKR A LPSAAKLA DWKPSLGAISEDKVVLV+ EREKSD+QTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRYAKS
        GSRDGE+RGV+GR+NSNDF   +S
Subjt:  GSRDGEARGVNGRSNSNDFRYAKS

TrEMBL top hitse value%identityAlignment
A0A0A0L6G1 Uncharacterized protein3.5e-4480.8Show/hide
Query:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPS-AAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRK
        MKFLFEFVSCCVPVNMSR++NPE T A G +EM+SL PITTRKHRRRKR ALLPS AAKLAADWKPSLGAISEDKVVLV+ EREKSD+QT E ERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPS-AAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRK

Query:  SGSRDGEARGVNGRSNSNDFRYAKS
        S SRDGE+RGV+GR+NSNDF   +S
Subjt:  SGSRDGEARGVNGRSNSNDFRYAKS

A0A1S3BTM8 uncharacterized protein LOC1034933946.5e-4384.17Show/hide
Query:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPS-AAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRK
        MKFLFEFVSCCVPVNMSR+ENPE T A   +EM++LAPITTRKHRRRKR ALLPS AAKLAADWKPSLGAISEDKVVLV+ EREKSDDQ AE ERSVKRK
Subjt:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPS-AAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRK

Query:  SGSRDGEARGVNGRSNSNDF
        SGSRDGE+R V+GR NSNDF
Subjt:  SGSRDGEARGVNGRSNSNDF

A0A6J1EVT0 uncharacterized protein LOC1114384551.4e-5696.03Show/hide
Query:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRYAKSGI
        GSRDGEARGVNGRSNSNDFR + + I
Subjt:  GSRDGEARGVNGRSNSNDFRYAKSGI

A0A6J1FP47 uncharacterized protein LOC1114472251.1e-4275.4Show/hide
Query:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFL EFVSCCVPV++SR+ENPEAT APG EE++SLAPITTR HRRR+RGAL  SAAK+A DW PSLGAISED VVLV+ ER+KS+D+TAESERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRYAKSGI
        GS++G+ARGV+GR+NSNDFR + + I
Subjt:  GSRDGEARGVNGRSNSNDFRYAKSGI

A0A6J1JD62 uncharacterized protein LOC1114833133.3e-5594.44Show/hide
Query:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS
        MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPI TRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTA SERSVKRKS
Subjt:  MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKS

Query:  GSRDGEARGVNGRSNSNDFRYAKSGI
        GSRDGEARGVNGRSNSNDFR + + I
Subjt:  GSRDGEARGVNGRSNSNDFRYAKSGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTCCTTTTTGAGTTCGTTTCTTGCTGCGTGCCGGTGAATATGTCTCGCCTGGAGAATCCGGAGGCTACGGCGGCGCCGGGCGTCGAGGAGATGAAATCTCTGGC
TCCGATTACCACCAGAAAACACCGGCGGAGAAAACGAGGTGCGTTGTTGCCTTCAGCGGCAAAACTAGCTGCCGATTGGAAACCGTCGCTAGGAGCGATCTCGGAGGATA
AGGTAGTTCTGGTGTTGAGGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAGAGGAAAAGCGGATCTCGAGACGGAGAGGCCAGAGGAGTT
AACGGCCGTAGTAACAGTAACGATTTCAGGTACGCGAAGTCCGGCATCGATCCCAGTCGTGATCCCGGCATTTTCTCCGACTCCGTTCTTGTTCTGATGCGATTCCGCTT
CTACTTTCTGATCAATCAGGCCCTTTATAAAGTTGAGGTTAAGGAAGAAAACTTCTCCATGAAATTAATTGCGTTGGATGGAGAAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTCCTTTTTGAGTTCGTTTCTTGCTGCGTGCCGGTGAATATGTCTCGCCTGGAGAATCCGGAGGCTACGGCGGCGCCGGGCGTCGAGGAGATGAAATCTCTGGC
TCCGATTACCACCAGAAAACACCGGCGGAGAAAACGAGGTGCGTTGTTGCCTTCAGCGGCAAAACTAGCTGCCGATTGGAAACCGTCGCTAGGAGCGATCTCGGAGGATA
AGGTAGTTCTGGTGTTGAGGGAGAGAGAGAAGAGCGATGATCAGACGGCGGAATCGGAACGATCGGTGAAGAGGAAAAGCGGATCTCGAGACGGAGAGGCCAGAGGAGTT
AACGGCCGTAGTAACAGTAACGATTTCAGGTACGCGAAGTCCGGCATCGATCCCAGTCGTGATCCCGGCATTTTCTCCGACTCCGTTCTTGTTCTGATGCGATTCCGCTT
CTACTTTCTGATCAATCAGGCCCTTTATAAAGTTGAGGTTAAGGAAGAAAACTTCTCCATGAAATTAATTGCGTTGGATGGAGAAGCATAA
Protein sequenceShow/hide protein sequence
MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLAADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGV
NGRSNSNDFRYAKSGIDPSRDPGIFSDSVLVLMRFRFYFLINQALYKVEVKEENFSMKLIALDGEA