CuGenDBv2

Gene ID	CmoCh16G009310
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	rRNA intron-encoded homing endonuclease, putative
Genome location	Cmo_Chr16:5790699..5791219
RNA-Seq Expression	CmoCh16G009310
Synteny	CmoCh16G009310
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8652002.1 hypothetical protein Csa_021689 [Cucumis sativus]

3.3e-50

97.32

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Query:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        MVST  LVPS GDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

KAF1854967.1 hypothetical protein Lal_00048035 [Lupinus albus]

5.7e-47

92.86

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Query:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V T  LVPS GDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

KAF1856092.1 hypothetical protein Lal_00045206 [Lupinus albus]

5.7e-47

92.86

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Query:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V T  LVPS GDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

KAF1856185.1 hypothetical protein Lal_00046585 [Lupinus albus]

5.7e-47

92.86

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Query:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V T  LVPS GDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

KAF1891686.1 hypothetical protein Lal_00049258, partial [Lupinus albus]

5.7e-47

92.86

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Query:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V T  LVPS GDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDF7 Uncharacterized protein

1.6e-50

97.32

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Query:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        MVST  LVPS GDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

A0A6A5L4S7 Uncharacterized protein

2.8e-47

92.86

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Query:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V T  LVPS GDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

A0A6A5L9N6 Uncharacterized protein

2.8e-47

92.86

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Query:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V T  LVPS GDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

A0A6A5LBQ2 Uncharacterized protein

2.8e-47

92.86

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Query:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V T  LVPS GDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

A0A6A5P2N0 Uncharacterized protein

2.8e-47

92.86

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Query:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI
        +V T  LVPS GDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQG ADVA RTP APYEKSKSLGSGGSMVARLKLKGI
Subjt:  MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGI

Query:  DGRAPPGVEPAA
        DGRAPPGVEPAA
Subjt:  DGRAPPGVEPAA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGTGAGCACCGATTGGCTTGTCCCTTCTATCGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGCCTCCGGCGCTACGAACAACTGCGAAAGCATTTGCCAAGGA
TGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATTGGCGGATGTTGCTTTAAGGA
CTCCGCCAGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCT
GCGGCTTAA

mRNA sequence

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Protein sequence

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MVSTDWLVPSIGDALLALTGRVVPPALRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGLADVALRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPPGVEP
AA

CmoCh16G009310 (gene) of Cucurbita moschata (Rifu) v1 genome