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CmoCh16G009430 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G009430
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionchromatin assembly factor 1 subunit FAS1
Genome locationCmo_Chr16:6039207..6040054
RNA-Seq ExpressionCmoCh16G009430
SyntenyCmoCh16G009430
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577465.1 Chromatin assembly factor 1 subunit FAS1, partial [Cucurbita argyrosperma subsp. sororia]5.2e-7897.48Show/hide
Query:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFIEEDPGESLSDCDKDDEENLEEEGCAKAEDD
        MERFLKKTKPSPSCQNDYLTTELTT VPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFIEEDPGESLSDCDKDDEENLEEEGCAKAEDD
Subjt:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFIEEDPGESLSDCDKDDEENLEEEGCAKAEDD

Query:  EDSEDEFIVLDGYLSENEGVEHDRNPMMLMRSRAHLALSKIWRAKSFVVCLSSKSMSTT
        EDSED FIVLDGYLSENEG+EHDRNPMMLMRSRAHLALSKIWRAKSFVVCLSSKS+STT
Subjt:  EDSEDEFIVLDGYLSENEGVEHDRNPMMLMRSRAHLALSKIWRAKSFVVCLSSKSMSTT

KAG6579353.1 Chromatin assembly factor 1 subunit FAS1, partial [Cucurbita argyrosperma subsp. sororia]4.5e-2952.31Show/hide
Query:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAY------------------------TQFMDCTLSSNNAINSVDIRRLHL-----------S
        MERFLKKTKPSPSC   Y TTELT SV +SKQS+NMLE                           Q +D +      + SV   R              S
Subjt:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAY------------------------TQFMDCTLSSNNAINSVDIRRLHL-----------S

Query:  SWRFIEEDPGESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR-NPMMLMRSRAHLALSKIWRAKSFVVCLSSKSMSTT
           + EED GESLSDCDKDDEENLEEEGCAKAEDDEDSED F VL     +           MMLMRS+AHLALSKIWRAK+FVVCLS+KS+STT
Subjt:  SWRFIEEDPGESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR-NPMMLMRSRAHLALSKIWRAKSFVVCLSSKSMSTT

KAG6586183.1 Chromatin assembly factor 1 subunit FAS1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3846.75Show/hide
Query:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI------------------------------
        MERFLKKTKPSPSCQND  TTELTTSVPLSKQS+NMLEA TQFMDCTLSS+N INSVDIRRLHLSSWRFI                              
Subjt:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI------------------------------

Query:  --------------------------------------------------------------------------------------------EEDPGESL
                                                                                                    EEDPGESL
Subjt:  --------------------------------------------------------------------------------------------EEDPGESL

Query:  SDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR
        SDCDKDDEENLEEEGCAKAEDDEDSED F V DGYLSENEGVEHDR
Subjt:  SDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR

XP_022937594.1 chromatin assembly factor 1 subunit FAS1 [Cucurbita moschata]1.5e-3746Show/hide
Query:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI------------------------------
        MERFLKKTKPS SCQND  TTELTTSVPLSKQS+NMLEA TQFMDCTLSS+NAINSVDIRRLHLSSWRFI                              
Subjt:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI------------------------------

Query:  ------------------------------------------------------------------------------------------------EEDP
                                                                                                        EEDP
Subjt:  ------------------------------------------------------------------------------------------------EEDP

Query:  GESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR
        GESLSDCDKDDEENLEEEGCAKAEDDEDSED F V DGYLSENEGVEHDR
Subjt:  GESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR

XP_023538129.1 chromatin assembly factor 1 subunit FAS1 [Cucurbita pepo subsp. pepo]3.1e-3846Show/hide
Query:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI------------------------------
        MERFLKKTKPSPSCQND  TTELTTSVPLSKQS+NMLEA TQFMDCTLSS+NAINSVDIRRLHLSSWRFI                              
Subjt:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI------------------------------

Query:  ------------------------------------------------------------------------------------------------EEDP
                                                                                                        EEDP
Subjt:  ------------------------------------------------------------------------------------------------EEDP

Query:  GESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR
        GESLSDCDKDDEENLEEEGCAKAE+DEDSED F V DGYLSENEGVEHDR
Subjt:  GESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR

TrEMBL top hitse value%identityAlignment
A0A0A0LMY1 Uncharacterized protein1.7e-2639.11Show/hide
Query:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI------------------------------
        MERFLKK+KPS S  ND  TTEL  SVPLSK+S+N+L+A TQ MDCTLSS++AI  VDIRR HLSSWR I                              
Subjt:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI------------------------------

Query:  ----------------------------------------------------------------------------------------------EEDPGE
                                                                                                      EEDPGE
Subjt:  ----------------------------------------------------------------------------------------------EEDPGE

Query:  SLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR
        SLSDCDKDDEE+LEEEGCAKAEDDE+SED F V DGYLSENEGV+ DR
Subjt:  SLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR

A0A6J1CSF8 chromatin assembly factor 1 subunit FAS12.2e-2940.16Show/hide
Query:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI------------------------------
        MERFLKK KPSPSCQ+D   TELTT VPLSK S+N ++A TQ MDCTLSSN+ I+ V IRRLHLSSWRFI                              
Subjt:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI------------------------------

Query:  -----------------------------------------------------------------------------------------------EEDPG
                                                                                                       EEDPG
Subjt:  -----------------------------------------------------------------------------------------------EEDPG

Query:  ESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR
        ESLSDCDKDDEENLEEEGCAKAEDDE+SED F V DGYLSENEGV+ DR
Subjt:  ESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR

A0A6J1FBM8 chromatin assembly factor 1 subunit FAS17.5e-3846Show/hide
Query:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI------------------------------
        MERFLKKTKPS SCQND  TTELTTSVPLSKQS+NMLEA TQFMDCTLSS+NAINSVDIRRLHLSSWRFI                              
Subjt:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI------------------------------

Query:  ------------------------------------------------------------------------------------------------EEDP
                                                                                                        EEDP
Subjt:  ------------------------------------------------------------------------------------------------EEDP

Query:  GESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR
        GESLSDCDKDDEENLEEEGCAKAEDDEDSED F V DGYLSENEGVEHDR
Subjt:  GESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR

A0A6J1HP33 chromatin assembly factor 1 subunit FAS12.9e-2691.43Show/hide
Query:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI
        MERFLKKTKPSPSCQND  TTELTTSVP SKQS+NMLEA TQFMDCTLSS+NAINSVDIRRLHLSSWRFI
Subjt:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI

A0A6J1HP33 chromatin assembly factor 1 subunit FAS12.5e-1794.44Show/hide
Query:  EEDPGESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR
        EEDPGESLSDCDKDDEENLEEEGCAKAEDDEDSED F V DGYLSENEGVEHDR
Subjt:  EEDPGESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR

A0A6J1HP33 chromatin assembly factor 1 subunit FAS11.5e-2538.71Show/hide
Query:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI------------------------------
        MERFLKK+KPS S  N+  TTEL  SVPLSK+ +N+LEA TQ MDCTLSS++AI  VDIRR HLSSWR I                              
Subjt:  MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFI------------------------------

Query:  ----------------------------------------------------------------------------------------------EEDPGE
                                                                                                      EEDPGE
Subjt:  ----------------------------------------------------------------------------------------------EEDPGE

Query:  SLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR
        SLSDCDKDDEE+LEEEGCAKAEDDE+SED F V DGYLSENEGV+ DR
Subjt:  SLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR

SwissProt top hitse value%identityAlignment
B2ZX90 Chromatin assembly factor 1 subunit FSM6.6e-0760.78Show/hide
Query:  EEDPGESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVE
        EEDPGESLSDC+KD++E +EE+       DE+SED F V DGYLS+NEG++
Subjt:  EEDPGESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVE

Q9SXY0 Chromatin assembly factor 1 subunit FAS18.9e-1268.52Show/hide
Query:  EEDPGESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR
        EE+ GESLSDC+KD++E+L EEGC+KA+D++DSED+F+V DGYLSE+EGV+ DR
Subjt:  EEDPGESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR

Arabidopsis top hitse value%identityAlignment
AT1G65470.1 chromatin assembly factor-1 (FASCIATA1) (FAS1)6.3e-1368.52Show/hide
Query:  EEDPGESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR
        EE+ GESLSDC+KD++E+L EEGC+KA+D++DSED+F+V DGYLSE+EGV+ DR
Subjt:  EEDPGESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR

AT1G65470.2 chromatin assembly factor-1 (FASCIATA1) (FAS1)6.3e-1368.52Show/hide
Query:  EEDPGESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR
        EE+ GESLSDC+KD++E+L EEGC+KA+D++DSED+F+V DGYLSE+EGV+ DR
Subjt:  EEDPGESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVLDGYLSENEGVEHDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGTTTCCTTAAGAAAACCAAACCTAGTCCATCATGTCAGAATGATTATCTAACTACTGAATTGACTACATCAGTTCCATTGAGTAAACAGAGTAAAAACATGCT
GGAGGCTTATACGCAGTTCATGGACTGCACTCTTTCTTCAAACAATGCGATCAATTCTGTTGATATTCGCAGGCTGCACTTATCTTCTTGGCGCTTCATAGAGGAGGATC
CTGGTGAAAGCCTCTCAGATTGTGATAAGGATGATGAAGAAAACTTAGAAGAGGAAGGTTGTGCAAAAGCGGAGGATGATGAAGACAGTGAAGATGAATTTATTGTCCTT
GATGGATATCTCTCAGAAAATGAGGGCGTGGAACATGACAGGAATCCGATGATGTTGATGAGGTCAAGAGCACACCTAGCTCTAAGCAAGATATGGAGGGCAAAGAGCTT
TGTAGTTTGTTTAAGCAGCAAAAGCATGTCTACAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCGTTTCCTTAAGAAAACCAAACCTAGTCCATCATGTCAGAATGATTATCTAACTACTGAATTGACTACATCAGTTCCATTGAGTAAACAGAGTAAAAACATGCT
GGAGGCTTATACGCAGTTCATGGACTGCACTCTTTCTTCAAACAATGCGATCAATTCTGTTGATATTCGCAGGCTGCACTTATCTTCTTGGCGCTTCATAGAGGAGGATC
CTGGTGAAAGCCTCTCAGATTGTGATAAGGATGATGAAGAAAACTTAGAAGAGGAAGGTTGTGCAAAAGCGGAGGATGATGAAGACAGTGAAGATGAATTTATTGTCCTT
GATGGATATCTCTCAGAAAATGAGGGCGTGGAACATGACAGGAATCCGATGATGTTGATGAGGTCAAGAGCACACCTAGCTCTAAGCAAGATATGGAGGGCAAAGAGCTT
TGTAGTTTGTTTAAGCAGCAAAAGCATGTCTACAACATGA
Protein sequenceShow/hide protein sequence
MERFLKKTKPSPSCQNDYLTTELTTSVPLSKQSKNMLEAYTQFMDCTLSSNNAINSVDIRRLHLSSWRFIEEDPGESLSDCDKDDEENLEEEGCAKAEDDEDSEDEFIVL
DGYLSENEGVEHDRNPMMLMRSRAHLALSKIWRAKSFVVCLSSKSMSTT