; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G009700 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G009700
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPectin lyase-like superfamily protein, putative
Genome locationCmo_Chr16:6590706..6591681
RNA-Seq ExpressionCmoCh16G009700
SyntenyCmoCh16G009700
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022932247.1 exopolygalacturonase-like [Cucurbita moschata]7.4e-10472.08Show/hide
Query:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMKL
        AL+  WREACGHN  G+VLV  G FL+LPLV EGPCKGSI L I GELL PV+KNFA G+YWLSI +VDNFFV+G   LNGGGSS W S TS R I+MKL
Subjt:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMKL

Query:  SSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGKY
         +VNTA I+ ITSSN KL HF +HGCRDV FDHVT I+P DS NTD IH+  SSG+NIMHSVI T DDCISLG GSKFIN+ D+QCGPGHGI IGSLGKY
Subjt:  SSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGKY

Query:  PNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDD
        PNEEDV EVT+R+STFV T N V IKTWS+SFSS VSKIAF+NL+MK+VKN II+++KYC DCD+
Subjt:  PNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDD

XP_022932248.1 exopolygalacturonase-like [Cucurbita moschata]3.1e-11881.62Show/hide
Query:  KSYLALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSI
        +S  AL+ AWREACGHN HG+VLVP G FLILPLV EGPCK SIGL I+GELLAPVSKNFATG YWLSISKVDN FVDGS SLNGGGSSAW S TSNR +
Subjt:  KSYLALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSI

Query:  SMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGS
        SMKLSSVNTARISKITSSN K  HFG+HGCRDV FDHVT I+P DS NTD IH+ KSSGINIMHSVIRT DDCISLG GSKFINI DIQCGPGHGI IGS
Subjt:  SMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGS

Query:  LGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDDYKM
        LGKYPNEEDV EVTIRDSTFV T+N V IKTWS+SFSS VSKIAFLNLEMK+VKN IIID+KYC DC + KM
Subjt:  LGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDDYKM

XP_023552929.1 exopolygalacturonase-like [Cucurbita pepo subsp. pepo]4.1e-9466.91Show/hide
Query:  LALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMK
        +AL+ AW EAC H+  G+VLVP G FLI  LV +GPCKGSIGL INGELLAP+  NFA G+ WLSI +VDN FVDG  SLNG GS AW     NR ISMK
Subjt:  LALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMK

Query:  LSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHV-TISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGK
        LS +N ARI+ ITS N K  HFG+HGC DV FDH+ T++P DS NTD IHI KSSGINIMHS   T DDCISLG GS+FINI +I CGPGHGI IGSLGK
Subjt:  LSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHV-TISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGK

Query:  YPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDDYKM
        +PNEEDV +V +RDSTFV T+N V IKTWS+S  S V+KIAFLNLEMK+VKN I+ID+KYC  C+  +M
Subjt:  YPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDDYKM

XP_023552935.1 exopolygalacturonase-like [Cucurbita pepo subsp. pepo]5.1e-12183.21Show/hide
Query:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMKL
        AL+ AW+EACGHN HGIVLVP GSFL+LPLV EGPCKGSIGL ING+LLAPVSKNFATGKYWLSISKVDNFFV+GS SLNGGGSSAWHS TSNR ISMKL
Subjt:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMKL

Query:  SSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGKY
        S VNTARISKITSSN K  HFG+H CRDV FDHVT I+P DS NTD IHI KSSGI IMHSVI T DDCISLG GSKFINI D+QCGPGHGI IGSLGKY
Subjt:  SSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGKY

Query:  PNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDDYKM
        PNEEDV EVTIRDSTFV T+N V IKTWS SFSS+VSKIAFLNLEMK+VKN IIID+KYCTDCD++KM
Subjt:  PNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDDYKM

XP_031738767.1 exopolygalacturonase [Cucumis sativus]1.2e-9365.31Show/hide
Query:  ALTGAWREACGHNRHGIVLVP-PGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMK
        AL+ AW EAC +N  GIVL+P  G FL+LPL+ +GPC G I + ++GELLAP+ ++FATG YWLSI +V+N F+DG  SL+G GS+AW S + NR +SM+
Subjt:  ALTGAWREACGHNRHGIVLVP-PGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMK

Query:  LSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGK
        L+ +N ARI+ I S N KL HF MHGCRDV FDHVT I+P +S NTD IHI  SSGINIMHS I T DDCISLG GSKFINI +IQCGPGHGI IGSLGK
Subjt:  LSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGK

Query:  YPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCT-DCDDYKMV
        YPNEEDVFEVT+RDSTF+ T+N V IKTWS+S+SS VSK+ FLNL+M NVKN IIID+ YC   C   KM+
Subjt:  YPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCT-DCDDYKMV

TrEMBL top hitse value%identityAlignment
A0A0A0L7H9 Uncharacterized protein5.7e-9465.31Show/hide
Query:  ALTGAWREACGHNRHGIVLVP-PGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMK
        AL+ AW EAC +N  GIVL+P  G FL+LPL+ +GPC G I + ++GELLAP+ ++FATG YWLSI +V+N F+DG  SL+G GS+AW S + NR +SM+
Subjt:  ALTGAWREACGHNRHGIVLVP-PGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMK

Query:  LSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGK
        L+ +N ARI+ I S N KL HF MHGCRDV FDHVT I+P +S NTD IHI  SSGINIMHS I T DDCISLG GSKFINI +IQCGPGHGI IGSLGK
Subjt:  LSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGK

Query:  YPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCT-DCDDYKMV
        YPNEEDVFEVT+RDSTF+ T+N V IKTWS+S+SS VSK+ FLNL+M NVKN IIID+ YC   C   KM+
Subjt:  YPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCT-DCDDYKMV

A0A5D3B9J1 Exopolygalacturonase-like2.3e-9065.9Show/hide
Query:  ALTGAWREACGHNRHGIVLVPP-GSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMK
        AL+ AW EAC +N  G+VL+P  G FL+LPL+ +GPC G I + ++GELLAP+++N  TG YWLSI KV+N F+DG   LNG GS+AW S + NR ISMK
Subjt:  ALTGAWREACGHNRHGIVLVPP-GSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMK

Query:  LSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGK
        L+ +N ARIS I S N KL HF +HGCRDV FDHVT I+P +S NTD IH+  SSGINIMHS I T DDCISLG GSKFINI ++QCGPGHGI IGSLGK
Subjt:  LSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGK

Query:  YPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYC
        YPNEEDVFEVT+RDSTF+ T N   IKTWS+S+S+ VSKI FLNL+M NVKN IIID+ YC
Subjt:  YPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYC

A0A6J1EVU6 exopolygalacturonase-like1.1e-9266.17Show/hide
Query:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMKL
        AL+ AW +AC  +  G+VLVP G FLI  LV +GPCKGSIGL INGELLAP+  NFA  + WLSI++VDN FVDG  SLNG GS AW     NR IS+KL
Subjt:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMKL

Query:  SSVNTARISKITSSNIKLSHFGMHGCRDVMFDHV-TISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGKY
          +N ARI+ ITS N K  HFG+HGC DV FDH+ T++P DS NTD IHI KSSGINIMHS   T DDCISLG GS+FINI +I CGPGHGI IGSLGKY
Subjt:  SSVNTARISKITSSNIKLSHFGMHGCRDVMFDHV-TISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGKY

Query:  PNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDDYKMV
        PNEEDV +V +RDSTFV T+N V IKTWS+S  S+V+KIAF+NLEMK+VK+ IIID+KYC DC+  KMV
Subjt:  PNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDDYKMV

A0A6J1EW42 exopolygalacturonase-like3.6e-10472.08Show/hide
Query:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMKL
        AL+  WREACGHN  G+VLV  G FL+LPLV EGPCKGSI L I GELL PV+KNFA G+YWLSI +VDNFFV+G   LNGGGSS W S TS R I+MKL
Subjt:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMKL

Query:  SSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGKY
         +VNTA I+ ITSSN KL HF +HGCRDV FDHVT I+P DS NTD IH+  SSG+NIMHSVI T DDCISLG GSKFIN+ D+QCGPGHGI IGSLGKY
Subjt:  SSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGKY

Query:  PNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDD
        PNEEDV EVT+R+STFV T N V IKTWS+SFSS VSKIAF+NL+MK+VKN II+++KYC DCD+
Subjt:  PNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDD

A0A6J1F153 exopolygalacturonase-like1.5e-11881.62Show/hide
Query:  KSYLALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSI
        +S  AL+ AWREACGHN HG+VLVP G FLILPLV EGPCK SIGL I+GELLAPVSKNFATG YWLSISKVDN FVDGS SLNGGGSSAW S TSNR +
Subjt:  KSYLALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSI

Query:  SMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGS
        SMKLSSVNTARISKITSSN K  HFG+HGCRDV FDHVT I+P DS NTD IH+ KSSGINIMHSVIRT DDCISLG GSKFINI DIQCGPGHGI IGS
Subjt:  SMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVT-ISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGS

Query:  LGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDDYKM
        LGKYPNEEDV EVTIRDSTFV T+N V IKTWS+SFSS VSKIAFLNLEMK+VKN IIID+KYC DC + KM
Subjt:  LGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDDYKM

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)2.0e-5139.93Show/hide
Query:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNR------
        ALT AW+EAC       +LVP G+F +  +  EGPCK SIGL + G L AP   +   G  W++++K+D   + G    +G G SAW     ++      
Subjt:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNR------

Query:  --SISMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTISPVDSS-NTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGI
          S++++L +V  + +  +T+ + K  H  + GC+++ F+   IS  ++S NTD IHI +S G+NI+++ I+T DDCISLG GSK INI +I CGPGHGI
Subjt:  --SISMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTISPVDSS-NTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGI

Query:  RIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYC
         +GSLG+Y NEE V  + +++ T   + N V IKTW  S     S++ F ++ M +V   I+ID+ YC
Subjt:  RIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYC

P26216 Exopolygalacturonase1.2e-4839.03Show/hide
Query:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVS-KNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSI---
        A+  AW  ACG      +L+P G FL+  L F GPCKG + + ++G LLA      +     W+ I +VDN  + G  +L+G G + W   +  +     
Subjt:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVS-KNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSI---

Query:  ----SMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGI
            S+ +  VN   +S +T  N K  H  M+ C+D++   VT+ +P DS NTD IH+  SSGI I ++VI   DDCIS+G G+  +NI  + CGPGHGI
Subjt:  ----SMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGI

Query:  RIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFS-SAVSKIAFLNLEMKNVKNSIIIDKKYC
         IGSLG+Y +E+DV ++ ++D T   T   V IK + ++ S   VSKI + N++M++  N I ID KYC
Subjt:  RIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFS-SAVSKIAFLNLEMKNVKNSIIIDKKYC

P35338 Exopolygalacturonase4.6e-4838.66Show/hide
Query:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVS-KNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSI---
        A+  AW  ACG      +L+P G FL+  L F GPCKG + + ++G LLA      +     W+ I +VDN  + G  +L+G G + W   +  +     
Subjt:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVS-KNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSI---

Query:  ----SMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGI
            S+ +  VN   +S +T  N K  H  M+ C++++   VT+ +P DS NTD IH+  SSGI I ++VI   DDCIS+G G+  +NI  + CGPGHGI
Subjt:  ----SMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGI

Query:  RIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFS-SAVSKIAFLNLEMKNVKNSIIIDKKYC
         IGSLG+Y +E+DV ++ ++D T   T   V IK + ++ S   VSKI + N++M++  N I ID KYC
Subjt:  RIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFS-SAVSKIAFLNLEMKNVKNSIIIDKKYC

P35339 Exopolygalacturonase4.1e-4939.41Show/hide
Query:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVS-KNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSI---
        A+  AW  ACG      +L+P G FL+ PL F GPCKG + + +NG LLA      +     W+ I +VDN  + G   L+G G + W   +  +     
Subjt:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVS-KNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSI---

Query:  ----SMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGI
            S+ +  VN   +S IT  N K  H  M+ C+D++   V + +P DS NTD IH+  SSG+ I ++VI   DDCIS+G G+  +NI  + CGPGHGI
Subjt:  ----SMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGI

Query:  RIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFS-SAVSKIAFLNLEMKNVKNSIIIDKKYC
         IGSLG+Y +E+DV ++ ++D T   T N V IK + ++ S    SKI + N++M++    IIID KYC
Subjt:  RIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFS-SAVSKIAFLNLEMKNVKNSIIIDKKYC

Q6H9K0 Exopolygalacturonase (Fragment)1.7e-5039.18Show/hide
Query:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGS-IGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMK
        A+  AW+ AC       VL+P G++ +  +  +GPCKGS IG  I+G + AP   +      W+S  ++D   V G+ +L+G G +AW     +++ + K
Subjt:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGS-IGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMK

Query:  LSSVNT-------ARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGI
         +++N        A +  ITS N K+ H  +  C D+ F HVT+ +P  S NTD IH+  S G+ I ++ I T DDCIS+G GS+ + I  + CGPGHGI
Subjt:  LSSVNT-------ARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGI

Query:  RIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYC
         IGSLG+Y NE++V  +T++  TF  T N V +KTW NS   A + + F +L M NV+N +I+D++YC
Subjt:  RIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYC

Arabidopsis top hitse value%identityAlignment
AT2G33160.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein2.6e-4639.64Show/hide
Query:  ALTGAWREACGHN-RHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAW-----HSYTSNR
        A T AW EAC  +     V +P G F +  + F GPCK SI  FI G LLAP +      + W+    VDN  V G   L+G GS +W     +  T+ R
Subjt:  ALTGAWREACGHN-RHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAW-----HSYTSNR

Query:  SISMKL--SSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGI
        +++M +  + V +++I+ + S N K+ HF +    D     VTI +P DS NTD I I KSS + I +  I T DDCI++  G+  ++I D++CGPGHGI
Subjt:  SISMKL--SSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGI

Query:  RIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSS-AVSKIAFLNLEMKNVKNSIIIDKKYCT--DCD
         +GSLG+Y  E++V  +T+R+S    T + + IKTW+ S S  +VS   + N++M NV N I+ID++YC    CD
Subjt:  RIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSS-AVSKIAFLNLEMKNVKNSIIIDKKYCT--DCD

AT2G43880.1 Pectin lyase-like superfamily protein1.7e-4540Show/hide
Query:  KSYLALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSK-NFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWH-----SY
        KS+L    AW  ACG     +V VP G++L+  LVF GPCK  I    +G L+AP +  +     YW+  +KV+   V G  +++  G+  W      S+
Subjt:  KSYLALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSK-NFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWH-----SY

Query:  TSNRSISMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGH
            + S+  S  N   +S ++S N +  H  +H   +V  ++V I +P  S NTD IH+  SSG+ I    I T DDCI+L  GS+ I I  + CGPGH
Subjt:  TSNRSISMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGH

Query:  GIRIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYC
        GI IGSLG Y NEE V  VT+  S F  T N V IKTW+      V+ + F NL M NV+N +IID+ YC
Subjt:  GIRIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYC

AT2G43890.1 Pectin lyase-like superfamily protein2.4e-4437.22Show/hide
Query:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVS-KNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSI---
        A  GAW+ AC       V VP GSFL+ P+ F GPC+  I   I G ++AP   +      YW+   KV+   + G  +L+  G+S W    S +S    
Subjt:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVS-KNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSI---

Query:  --SMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHV-TISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRI
          SM  +  N   +S +TS N + +H  ++ C +V+   V  ++P  S NTD +H+  S+G+ +      T DDCIS+G G++ + +  + CGPGHGI I
Subjt:  --SMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHV-TISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRI

Query:  GSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYC
        GSLG+  NE  V  +T+ +S F  ++N V IKTW+   +  V  + F NL MKNV+N II+D+ YC
Subjt:  GSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYC

AT3G07850.1 Pectin lyase-like superfamily protein1.8e-4736.43Show/hide
Query:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVS-KNFATGKYWLSISKVDNFFVDGSSSL-NGGGSSAWHSYTSNRS---
        A   AW+EAC       + VP G +++  L F+GPCKG + L +NG   AP + K       W+    + +F ++G+ ++ +G GS AW +    ++   
Subjt:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVS-KNFATGKYWLSISKVDNFFVDGSSSL-NGGGSSAWHSYTSNRS---

Query:  ----ISMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHG
            I+++ + +  ++I+ ITS+N KL H  +  C+++    + I +P +S NTD IHI +S+G+N++ + I+T DDC+S+G G++ + + +++CGPGHG
Subjt:  ----ISMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHG

Query:  IRIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYC
        I IGSLG+YPNE+ V  VT+R      T+N V IKTW  S     S I F ++ M NV   ++ID++YC
Subjt:  IRIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYC

AT3G14040.1 Pectin lyase-like superfamily protein2.3e-4736.8Show/hide
Query:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVS-KNFATGKYWLSISKVDNFFVDGSSSL-NGGGSSAWHSYTSNRS---
        A   AW+EAC       + VP G +L+  L F+GPCKG + L +NG   AP + K       W+    + +F ++G+ ++ +G GS AW +    ++   
Subjt:  ALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVS-KNFATGKYWLSISKVDNFFVDGSSSL-NGGGSSAWHSYTSNRS---

Query:  ----ISMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHG
            I+++ + +  ++I+ ITS+N KL H  +  C+++    + I +P +S NTD IHI +S+G+N++ + I+T DDC+S+G G++ + + +++CGPGHG
Subjt:  ----ISMKLSSVNTARISKITSSNIKLSHFGMHGCRDVMFDHVTI-SPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHG

Query:  IRIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYC
        I IGSLG+YPNE+ V  VT+R      T+N V IKTW  S     S I F ++ M NV   ++ID++YC
Subjt:  IRIGSLGKYPNEEDVFEVTIRDSTFVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAAAAGTTACTTGGCATTAACTGGGGCATGGAGGGAAGCTTGTGGACATAACCGACATGGTATAGTTTTAGTACCACCGGGGAGCTTTTTGATTTTACCGTTAGT
GTTTGAAGGTCCATGCAAAGGATCCATTGGTCTGTTTATTAATGGTGAATTGTTGGCTCCTGTCAGCAAGAATTTCGCCACCGGTAAATACTGGCTGAGTATCTCCAAAG
TCGACAATTTTTTCGTTGACGGTTCTAGCAGCTTGAACGGCGGCGGTTCTTCAGCTTGGCATTCCTACACTTCTAACCGTTCAATTTCGATGAAACTTTCTAGTGTCAAC
ACTGCGAGAATTTCAAAGATAACATCGTCCAATATCAAATTATCACATTTTGGTATGCATGGATGTCGTGATGTCATGTTTGATCACGTTACAATATCTCCGGTAGATAG
CTCCAATACAGATGAAATTCACATTTTCAAGTCAAGTGGTATCAATATTATGCATTCAGTGATTCGCACCAGAGACGATTGCATTTCTCTAGGCCTTGGAAGTAAATTCA
TCAACATAATAGACATCCAGTGTGGTCCAGGTCATGGAATTAGAATCGGTAGCCTCGGAAAGTACCCAAATGAAGAAGATGTCTTTGAAGTCACAATAAGAGACTCTACA
TTTGTTGTCACAAACAACAGTGTGAGCATCAAAACATGGTCAAATTCATTTTCTAGTGCTGTTAGCAAGATCGCTTTTCTCAATCTCGAAATGAAGAATGTAAAAAATTC
TATCATCATTGATAAAAAATATTGCACTGACTGCGACGACTATAAAATGGTATATATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAAAAGTTACTTGGCATTAACTGGGGCATGGAGGGAAGCTTGTGGACATAACCGACATGGTATAGTTTTAGTACCACCGGGGAGCTTTTTGATTTTACCGTTAGT
GTTTGAAGGTCCATGCAAAGGATCCATTGGTCTGTTTATTAATGGTGAATTGTTGGCTCCTGTCAGCAAGAATTTCGCCACCGGTAAATACTGGCTGAGTATCTCCAAAG
TCGACAATTTTTTCGTTGACGGTTCTAGCAGCTTGAACGGCGGCGGTTCTTCAGCTTGGCATTCCTACACTTCTAACCGTTCAATTTCGATGAAACTTTCTAGTGTCAAC
ACTGCGAGAATTTCAAAGATAACATCGTCCAATATCAAATTATCACATTTTGGTATGCATGGATGTCGTGATGTCATGTTTGATCACGTTACAATATCTCCGGTAGATAG
CTCCAATACAGATGAAATTCACATTTTCAAGTCAAGTGGTATCAATATTATGCATTCAGTGATTCGCACCAGAGACGATTGCATTTCTCTAGGCCTTGGAAGTAAATTCA
TCAACATAATAGACATCCAGTGTGGTCCAGGTCATGGAATTAGAATCGGTAGCCTCGGAAAGTACCCAAATGAAGAAGATGTCTTTGAAGTCACAATAAGAGACTCTACA
TTTGTTGTCACAAACAACAGTGTGAGCATCAAAACATGGTCAAATTCATTTTCTAGTGCTGTTAGCAAGATCGCTTTTCTCAATCTCGAAATGAAGAATGTAAAAAATTC
TATCATCATTGATAAAAAATATTGCACTGACTGCGACGACTATAAAATGGTATATATTTAA
Protein sequenceShow/hide protein sequence
MIKSYLALTGAWREACGHNRHGIVLVPPGSFLILPLVFEGPCKGSIGLFINGELLAPVSKNFATGKYWLSISKVDNFFVDGSSSLNGGGSSAWHSYTSNRSISMKLSSVN
TARISKITSSNIKLSHFGMHGCRDVMFDHVTISPVDSSNTDEIHIFKSSGINIMHSVIRTRDDCISLGLGSKFINIIDIQCGPGHGIRIGSLGKYPNEEDVFEVTIRDST
FVVTNNSVSIKTWSNSFSSAVSKIAFLNLEMKNVKNSIIIDKKYCTDCDDYKMVYI