; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G009880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G009880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPSI-G
Genome locationCmo_Chr16:6782159..6782641
RNA-Seq ExpressionCmoCh16G009880
SyntenyCmoCh16G009880
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000549 - Photosystem I PsaG/PsaK protein
IPR016370 - Photosystem I PsaG/PsaK, plant
IPR017494 - Photosystem I PsaG, plant
IPR023618 - Photosystem I PsaG/PsaK domain, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577507.1 Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.2e-7598.74Show/hide
Query:  AAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQN
        AAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRL+PTIKSSRKLTSSG RRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQN
Subjt:  AAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQN

Query:  GVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        GVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  GVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

KAG7015565.1 Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-7598.74Show/hide
Query:  AAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQN
        AAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRL+PTIKSSRKLTSSG RRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQN
Subjt:  AAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQN

Query:  GVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        GVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  GVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_022932372.1 photosystem I reaction center subunit V, chloroplastic-like [Cucurbita moschata]7.6e-77100Show/hide
Query:  MAAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
        MAAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
Subjt:  MAAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ

Query:  NGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  NGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_022965205.1 photosystem I reaction center subunit V, chloroplastic-like [Cucurbita maxima]3.9e-7396.84Show/hide
Query:  AAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        AAAAASSSAV+TAPTFSAAARRQQ SPS+LS QGLRLLPTIKSSRKLTSS TRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
Subjt:  AAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  VTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        VTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  VTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_023553395.1 photosystem I reaction center subunit V, chloroplastic-like [Cucurbita pepo subsp. pepo]1.6e-7498.11Show/hide
Query:  AAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQN
        AAAAA+SSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSS TRRSTVVKAALEPSVVISLSTGLSLFLGRFVFF FQRENVSKQVPEQN
Subjt:  AAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQN

Query:  GVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        GVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  GVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

TrEMBL top hitse value%identityAlignment
A0A0A0L4W3 PSI-G2.7e-6484.08Show/hide
Query:  AAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGV
        AAAASSSAV  APTFSA A RQQP+P+ +SFQGLR LP++KSSR + ++ +RRS  VKA L PS+VISLSTGLSLFLGRFVFFNFQRENV KQVPEQNG+
Subjt:  AAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGV

Query:  THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A1S3BKK6 PSI-G1.5e-6585.9Show/hide
Query:  AAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVT
        AAASSSAV  APTFSA A RQQPSP+ +SFQGLR LP++KSSR + ++ TRRS  VKA L PS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG+T
Subjt:  AAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVT

Query:  HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A5D3CPR0 PSI-G1.5e-6585.9Show/hide
Query:  AAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVT
        AAASSSAV  APTFSA A RQQPSP+ +SFQGLR LP++KSSR + ++ TRRS  VKA L PS+VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG+T
Subjt:  AAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVT

Query:  HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1EWH3 PSI-G3.7e-77100Show/hide
Query:  MAAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
        MAAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
Subjt:  MAAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ

Query:  NGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  NGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1HN34 PSI-G1.9e-7396.84Show/hide
Query:  AAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        AAAAASSSAV+TAPTFSAAARRQQ SPS+LS QGLRLLPTIKSSRKLTSS TRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
Subjt:  AAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  VTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        VTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  VTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

SwissProt top hitse value%identityAlignment
P12357 Photosystem I reaction center subunit V, chloroplastic1.4e-4968.07Show/hide
Query:  AAAAASSSAVITAPTFSAAARRQQPSP----SALSFQGLRLL----PTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVS
        AAA AS S+ + AP  S   + QQ          SF GLR L     +  SS  L+ S  RRS   +A L PS+VISLSTGLSLFLGRFVFFNFQREN++
Subjt:  AAAAASSSAVITAPTFSAAARRQQPSP----SALSFQGLRLL----PTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVS

Query:  KQVPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        KQVPEQNG++HFEAGD RAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FF
Subjt:  KQVPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

P14224 Photosystem I reaction center subunit V, chloroplastic1.5e-1439.34Show/hide
Query:  QGLRLLPTIKSSRKLTSSGTRRSTVV-KAALEPSVVISLSTGLSLFLGRFVFFNFQRENV---SKQVPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNI
        Q L   P++++S ++      R  VV KAAL+P +VIS ST   L +GRFVF  +QR      S   P+  G T+F+  D++     ++  +NDP GFNI
Subjt:  QGLRLLPTIKSSRKLTSSGTRRSTVV-KAALEPSVVISLSTGLSLFLGRFVFFNFQRENV---SKQVPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNI

Query:  VDVLAWGSIGHIVAYYILATSS
        +DV  WG++GH V + +LA +S
Subjt:  VDVLAWGSIGHIVAYYILATSS

Q00327 Photosystem I reaction center subunit V, chloroplastic2.9e-4767.31Show/hide
Query:  AASSSAVITAPTFSAAARRQQPSP-SALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVT
        A S++AV++ P  + A  R  PSP +A SF+G+             S   RRS   +AALEPSVVISLSTGLSL +GRFVFFNFQRENV+KQVPEQNG T
Subjt:  AASSSAVITAPTFSAAARRQQPSP-SALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVT

Query:  HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        HFEAGD RAKE+  +LKSNDPVGFN+VDVLAWGSIGHIVAYYILAT+SNGYDP FF
Subjt:  HFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Q9S7N7 Photosystem I reaction center subunit V, chloroplastic3.7e-5070.62Show/hide
Query:  AASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSR---KLTSSGTRRST-VVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ
        A S+SA+++  TFS A   +  +P+++SF GLR L    SS    KL+++G + S+ VV+A L PS+VISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQ
Subjt:  AASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSR---KLTSSGTRRST-VVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ

Query:  NGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG THFEAGD RAKEYVSLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  NGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Q9SPM4 Photosystem I reaction center subunit V, chloroplastic3.4e-1946.49Show/hide
Query:  KSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHI
        KS+ K+T  G             S +IS ST   L LGRFVF  FQR  VS+  +PEQNGV          + + S+LK+NDP GF +VDVLAWG++GH 
Subjt:  KSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHI

Query:  VAYYILATSSNGYD
        V ++ILAT++NGY+
Subjt:  VAYYILATSSNGYD

Arabidopsis top hitse value%identityAlignment
AT1G55670.1 photosystem I subunit G2.6e-5170.62Show/hide
Query:  AASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSR---KLTSSGTRRST-VVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ
        A S+SA+++  TFS A   +  +P+++SF GLR L    SS    KL+++G + S+ VV+A L PS+VISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQ
Subjt:  AASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSR---KLTSSGTRRST-VVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ

Query:  NGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG THFEAGD RAKEYVSLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  NGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCGCCGCCGCCTCCTCCTCTGCCGTCATCACCGCCCCAACCTTCTCCGCAGCTGCCAGAAGGCAGCAGCCAAGCCCCTCCGCCCTCTCATTCCAAGGCCT
CCGCCTGCTGCCAACCATCAAATCTAGCCGCAAGCTCACCAGCTCTGGCACAAGGAGATCCACGGTGGTGAAGGCAGCGCTGGAGCCATCTGTTGTGATAAGCCTAAGCA
CAGGGCTGTCCCTGTTCTTGGGGAGGTTCGTGTTCTTCAATTTTCAGAGGGAGAATGTGAGCAAGCAAGTGCCGGAGCAGAATGGAGTGACCCATTTTGAGGCCGGCGAT
GTGAGGGCTAAGGAATATGTTAGCCTCTTGAAATCTAATGACCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGCTCTATTGGCCATATTGTTGCTTATTATAT
CTTGGCTACCTCTAGCAATGGCTACGATCCTAAGTTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCCGCCGCCGCCTCCTCCTCTGCCGTCATCACCGCCCCAACCTTCTCCGCAGCTGCCAGAAGGCAGCAGCCAAGCCCCTCCGCCCTCTCATTCCAAGGCCT
CCGCCTGCTGCCAACCATCAAATCTAGCCGCAAGCTCACCAGCTCTGGCACAAGGAGATCCACGGTGGTGAAGGCAGCGCTGGAGCCATCTGTTGTGATAAGCCTAAGCA
CAGGGCTGTCCCTGTTCTTGGGGAGGTTCGTGTTCTTCAATTTTCAGAGGGAGAATGTGAGCAAGCAAGTGCCGGAGCAGAATGGAGTGACCCATTTTGAGGCCGGCGAT
GTGAGGGCTAAGGAATATGTTAGCCTCTTGAAATCTAATGACCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGCTCTATTGGCCATATTGTTGCTTATTATAT
CTTGGCTACCTCTAGCAATGGCTACGATCCTAAGTTCTTCTAG
Protein sequenceShow/hide protein sequence
MAAAAAASSSAVITAPTFSAAARRQQPSPSALSFQGLRLLPTIKSSRKLTSSGTRRSTVVKAALEPSVVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGVTHFEAGD
VRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF