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CmoCh16G010110 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G010110
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHMA domain-containing protein
Genome locationCmo_Chr16:6971295..6971687
RNA-Seq ExpressionCmoCh16G010110
SyntenyCmoCh16G010110
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015589.1 Heavy metal-associated isoprenylated plant protein 32, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-6996.92Show/hide
Query:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQPQPVPWP
        MDSDDGSVRICGRVNPRTFLKVIE+SGKHAEVKSIRFDGEAGDRRYYPYGDDPIHH YQNSQEQSRWFDT+YPQQPPLPPQPYPWQFMLPQPQPQPVPWP
Subjt:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQPQPVPWP

Query:  MIGPGGPPGNPAPEEPSQDNNNSQRCCTIM
        MIGPGGPPGNPAPEEPSQDNNN+QRCCTIM
Subjt:  MIGPGGPPGNPAPEEPSQDNNNSQRCCTIM

XP_008449023.1 PREDICTED: uncharacterized protein LOC103491020 isoform X1 [Cucumis melo]1.6e-4069.12Show/hide
Query:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH-----PYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQP
        MDSDDGSVRICGRVNPRTFLKVIE+SGKHAEV+SIRFDGEAGDRRYYP +G+D  +H     PY +  EQS WFD +YP      PQPYPWQ MLPQPQP
Subjt:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH-----PYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQP

Query:  QPVPWPMIGPGGPPGNPAPEEPSQDNNNSQRCCTIM
        QPVPWPMI PG P  +    + +QDNN  QRCCT+M
Subjt:  QPVPWPMIGPGGPPGNPAPEEPSQDNNNSQRCCTIM

XP_008449024.1 PREDICTED: uncharacterized protein LOC103491020 isoform X2 [Cucumis melo]1.6e-4069.12Show/hide
Query:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH-----PYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQP
        MDSDDGSVRICGRVNPRTFLKVIE+SGKHAEV+SIRFDGEAGDRRYYP +G+D  +H     PY +  EQS WFD +YP      PQPYPWQ MLPQPQP
Subjt:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH-----PYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQP

Query:  QPVPWPMIGPGGPPGNPAPEEPSQDNNNSQRCCTIM
        QPVPWPMI PG P  +    + +QDNN  QRCCT+M
Subjt:  QPVPWPMIGPGGPPGNPAPEEPSQDNNNSQRCCTIM

XP_022932346.1 uncharacterized protein LOC111438728 [Cucurbita moschata]5.1e-71100Show/hide
Query:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQPQPVPWP
        MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQPQPVPWP
Subjt:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQPQPVPWP

Query:  MIGPGGPPGNPAPEEPSQDNNNSQRCCTIM
        MIGPGGPPGNPAPEEPSQDNNNSQRCCTIM
Subjt:  MIGPGGPPGNPAPEEPSQDNNNSQRCCTIM

XP_023553397.1 circumsporozoite protein-like [Cucurbita pepo subsp. pepo]6.4e-6687.5Show/hide
Query:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFML-----------
        MDSDDGSVRICGRVNPRTFLKVIE+SGKHAEVKSIRFDGEAGDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYP QPPLPPQPYPWQFML           
Subjt:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFML-----------

Query:  ---PQPQPQPVPWPMIGPGGPPGNPAPEEPSQDNNNSQRCCTIM
           PQPQPQPVPW MIGPGGPPGNPAPEEPSQDNNN+QRCCTIM
Subjt:  ---PQPQPQPVPWPMIGPGGPPGNPAPEEPSQDNNNSQRCCTIM

TrEMBL top hitse value%identityAlignment
A0A0A0L264 Uncharacterized protein3.8e-4068.38Show/hide
Query:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH-----PYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQP
        MDSDDGSVRICGRVNPRTFLKVIE+SGKHAEV+SIRFDGEAGDRRYYP +GDD  +H     PYQ+  EQS WFD  YP      PQPYPWQ MLPQPQP
Subjt:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH-----PYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQP

Query:  QPVPWPMIGPGGPPGNPAPEEPSQDNNNSQRCCTIM
        QPV WPM+ PG P   P  +    + NN QRCCT+M
Subjt:  QPVPWPMIGPGGPPGNPAPEEPSQDNNNSQRCCTIM

A0A1S3BL42 uncharacterized protein LOC103491020 isoform X17.7e-4169.12Show/hide
Query:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH-----PYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQP
        MDSDDGSVRICGRVNPRTFLKVIE+SGKHAEV+SIRFDGEAGDRRYYP +G+D  +H     PY +  EQS WFD +YP      PQPYPWQ MLPQPQP
Subjt:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH-----PYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQP

Query:  QPVPWPMIGPGGPPGNPAPEEPSQDNNNSQRCCTIM
        QPVPWPMI PG P  +    + +QDNN  QRCCT+M
Subjt:  QPVPWPMIGPGGPPGNPAPEEPSQDNNNSQRCCTIM

A0A1S3BLR2 uncharacterized protein LOC103491020 isoform X27.7e-4169.12Show/hide
Query:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH-----PYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQP
        MDSDDGSVRICGRVNPRTFLKVIE+SGKHAEV+SIRFDGEAGDRRYYP +G+D  +H     PY +  EQS WFD +YP      PQPYPWQ MLPQPQP
Subjt:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH-----PYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQP

Query:  QPVPWPMIGPGGPPGNPAPEEPSQDNNNSQRCCTIM
        QPVPWPMI PG P  +    + +QDNN  QRCCT+M
Subjt:  QPVPWPMIGPGGPPGNPAPEEPSQDNNNSQRCCTIM

A0A5A7VH99 Chitin-binding lectin 1-like7.7e-4169.12Show/hide
Query:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH-----PYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQP
        MDSDDGSVRICGRVNPRTFLKVIE+SGKHAEV+SIRFDGEAGDRRYYP +G+D  +H     PY +  EQS WFD +YP      PQPYPWQ MLPQPQP
Subjt:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYP-YGDDPIHH-----PYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQP

Query:  QPVPWPMIGPGGPPGNPAPEEPSQDNNNSQRCCTIM
        QPVPWPMI PG P  +    + +QDNN  QRCCT+M
Subjt:  QPVPWPMIGPGGPPGNPAPEEPSQDNNNSQRCCTIM

A0A6J1EW45 uncharacterized protein LOC1114387282.5e-71100Show/hide
Query:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQPQPVPWP
        MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQPQPVPWP
Subjt:  MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQPQPVPWP

Query:  MIGPGGPPGNPAPEEPSQDNNNSQRCCTIM
        MIGPGGPPGNPAPEEPSQDNNNSQRCCTIM
Subjt:  MIGPGGPPGNPAPEEPSQDNNNSQRCCTIM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAGATGATGGGTCAGTCAGAATCTGTGGAAGAGTGAATCCAAGAACATTCCTGAAAGTGATTGAAAGGTCAGGCAAACATGCAGAGGTTAAAAGTATAAGATT
TGATGGTGAAGCTGGAGATAGAAGATATTACCCTTATGGAGATGATCCCATTCATCATCCTTATCAGAATTCCCAAGAACAATCTCGCTGGTTTGACACAGCTTACCCCC
AACAACCACCGCTGCCGCCGCAGCCATACCCTTGGCAGTTCATGCTGCCACAGCCACAGCCGCAGCCTGTCCCATGGCCAATGATAGGGCCGGGCGGGCCACCTGGTAAT
CCAGCCCCTGAGGAACCCAGCCAAGATAATAACAACAGTCAGAGATGTTGTACAATTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAGATGATGGGTCAGTCAGAATCTGTGGAAGAGTGAATCCAAGAACATTCCTGAAAGTGATTGAAAGGTCAGGCAAACATGCAGAGGTTAAAAGTATAAGATT
TGATGGTGAAGCTGGAGATAGAAGATATTACCCTTATGGAGATGATCCCATTCATCATCCTTATCAGAATTCCCAAGAACAATCTCGCTGGTTTGACACAGCTTACCCCC
AACAACCACCGCTGCCGCCGCAGCCATACCCTTGGCAGTTCATGCTGCCACAGCCACAGCCGCAGCCTGTCCCATGGCCAATGATAGGGCCGGGCGGGCCACCTGGTAAT
CCAGCCCCTGAGGAACCCAGCCAAGATAATAACAACAGTCAGAGATGTTGTACAATTATGTGA
Protein sequenceShow/hide protein sequence
MDSDDGSVRICGRVNPRTFLKVIERSGKHAEVKSIRFDGEAGDRRYYPYGDDPIHHPYQNSQEQSRWFDTAYPQQPPLPPQPYPWQFMLPQPQPQPVPWPMIGPGGPPGN
PAPEEPSQDNNNSQRCCTIM