; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G010730 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G010730
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDUF295 domain-containing protein
Genome locationCmo_Chr16:7586784..7588022
RNA-Seq ExpressionCmoCh16G010730
SyntenyCmoCh16G010730
Gene Ontology termsNA
InterPro domainsIPR005174 - Domain unknown function DUF295


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577578.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]5.0e-8466.53Show/hide
Query:  QKNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDK
        +KNRT PVDFKFCFNKRCCG SFGWLIMCEETL+L LF+PFSGTVICLPSI ID+EP+Y PDR+VKAILTKDPSLYPNDYMVVAIYSSYSRLCLMR NDK
Subjt:  QKNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDK

Query:  SWTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDE----------------------------------------------------IYKLI
        SWTYSY EPNIPFKDI V SDTLYATENNMM+WKVEVKNRDDE                                                    +YKLI
Subjt:  SWTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDE----------------------------------------------------IYKLI

Query:  DERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSGKF
        DE EN M RAVK+KSLDGDAMFIGDSQSICVSTK FPK      YF +G +
Subjt:  DERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSGKF

XP_022923266.1 probable F-box protein At1g65740 [Cucurbita moschata]5.0e-8466.53Show/hide
Query:  QKNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDK
        +KNRT PVDFKFCFNKRCCG SFGWLIMCEETL+L LF+PFSGTVICLPSI ID+EP+Y PDR+VKAILTKDPSLYPNDYMVVAIYSSYSRLCLMR NDK
Subjt:  QKNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDK

Query:  SWTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDE----------------------------------------------------IYKLI
        SWTYSY EPNIPFKDI V SDTLYATENNMM+WKVEVKNRDDE                                                    +YKLI
Subjt:  SWTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDE----------------------------------------------------IYKLI

Query:  DERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSGKF
        DE EN M RAVK+KSLDGDAMFIGDSQSICVSTK FPK      YF +G +
Subjt:  DERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSGKF

XP_022923394.1 uncharacterized protein LOC111431103 [Cucurbita moschata]1.7e-7661.45Show/hide
Query:  QKNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDK
        +KNRT PVDFKFCFNKRCCG SFGWLIMCEETLDL LF+PFSGTVI LPSI I++EP+Y PDR+VKAILTKDPSLYPNDYMVVAIY S ++LCLMR NDK
Subjt:  QKNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDK

Query:  SWTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDE----------------------------------------------------IYKLI
        SWTY Y EPNIPF D+ VY DT+YA+  +MMIWKVEVK R+DE                                                    +YKL 
Subjt:  SWTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDE----------------------------------------------------IYKLI

Query:  DERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSG
        +ERENGMR+A+KVKSLDGDAMFIGDSQSICVSTKDF K      YF +G
Subjt:  DERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSG

XP_023552957.1 probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo]2.5e-8366.14Show/hide
Query:  QKNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDK
        +KNRT PVDFKFCFNKRCCG SFGWLIMCEETLDL LF+PFSGTVICLPSI I++EP+Y PDR+VKAILTKDP LYPNDYMVVAIYSSYSRLCLMR NDK
Subjt:  QKNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDK

Query:  SWTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDE----------------------------------------------------IYKLI
        SWTYSY EPNIPFKDI V SDTLYATENNMM+WKVEVKNRDDE                                                    +YKLI
Subjt:  SWTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDE----------------------------------------------------IYKLI

Query:  DERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSGKF
        DE EN M RAVK+KSLDGDAMFIGDSQSICVSTK FPK      YF +G +
Subjt:  DERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSGKF

XP_023553097.1 uncharacterized protein LOC111810599 [Cucurbita pepo subsp. pepo]1.3e-7660.89Show/hide
Query:  KNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDKS
        KNRT PVDFKFCFNKRCCG SFGWLIMCEETLDL LF+PFSGT ICLPSI I++EP+Y PDR+VKAILTKDPSLYPNDYMV+AIY S  +LCLMR NDKS
Subjt:  KNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDKS

Query:  WTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDE----------------------------------------------------IYKLID
        WTY Y EPNIPF D+ VY +T+YA+  +MM+WKVEVK R+DE                                                    +YKL +
Subjt:  WTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDE----------------------------------------------------IYKLID

Query:  ERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSG
        ERENGMR+A+KVKSLDGDAMFIGDSQSICVSTKDFPK      YF +G
Subjt:  ERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSG

TrEMBL top hitse value%identityAlignment
A0A6J1E5P5 probable F-box protein At1g657401.2e-5951.71Show/hide
Query:  NRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDKSW
        N    VDFKFCFNKRCCG SFGWLIM +ETL ++LF+PFSG VI LP +   ++  + P  ++KAILTKDPSLYPNDYMVV I+ +Y RLCL+R NDK+W
Subjt:  NRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDKSW

Query:  TYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDD----------------------------------------------------EIYKLIDE
        TY Y  PNIPF DI +  DT+YATEN++ +WKVEV+N +D                                                    E+YKLI E
Subjt:  TYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDD----------------------------------------------------EIYKLIDE

Query:  RENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDF
         E+ +RRAV+VKSLDGDA+FIGDSQSICVSTK+F
Subjt:  RENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDF

A0A6J1E5W8 uncharacterized protein LOC1114310082.7e-5951.69Show/hide
Query:  KNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDKS
        +N    VDFKFCFNKRC G SFGWLIM +ETL ++LF+PFSGTVI LP +   ++  + P  ++KAILTKDPSLYPNDYMVV I+ +Y RLCL+R NDK+
Subjt:  KNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDKS

Query:  WTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDD----------------------------------------------------EIYKLID
        WTY Y  PNIPF DI +  DTLYATE  + +WKVEV+N +D                                                    E+YKLI 
Subjt:  WTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDD----------------------------------------------------EIYKLID

Query:  ERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFP
        E E+ MRRAV++KSLDGDA+FIGDSQSICVSTK+FP
Subjt:  ERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFP

A0A6J1E6A0 uncharacterized protein LOC1114311038.4e-7761.45Show/hide
Query:  QKNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDK
        +KNRT PVDFKFCFNKRCCG SFGWLIMCEETLDL LF+PFSGTVI LPSI I++EP+Y PDR+VKAILTKDPSLYPNDYMVVAIY S ++LCLMR NDK
Subjt:  QKNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDK

Query:  SWTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDE----------------------------------------------------IYKLI
        SWTY Y EPNIPF D+ VY DT+YA+  +MMIWKVEVK R+DE                                                    +YKL 
Subjt:  SWTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDE----------------------------------------------------IYKLI

Query:  DERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSG
        +ERENGMR+A+KVKSLDGDAMFIGDSQSICVSTKDF K      YF +G
Subjt:  DERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSG

A0A6J1E6C7 probable F-box protein At1g657402.4e-8466.53Show/hide
Query:  QKNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDK
        +KNRT PVDFKFCFNKRCCG SFGWLIMCEETL+L LF+PFSGTVICLPSI ID+EP+Y PDR+VKAILTKDPSLYPNDYMVVAIYSSYSRLCLMR NDK
Subjt:  QKNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDK

Query:  SWTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDE----------------------------------------------------IYKLI
        SWTYSY EPNIPFKDI V SDTLYATENNMM+WKVEVKNRDDE                                                    +YKLI
Subjt:  SWTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDE----------------------------------------------------IYKLI

Query:  DERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSGKF
        DE EN M RAVK+KSLDGDAMFIGDSQSICVSTK FPK      YF +G +
Subjt:  DERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSGKF

A0A6J1E923 probable F-box protein At4g221653.4e-6250.99Show/hide
Query:  KNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDKS
        +N   PVDFKFCFNKRCCG SFGWLIM +ETL ++LF+PFSGTVI LP +   ++  + P  ++KAILTKDPSLYPNDYMVVAI+ +Y RLCL+R NDK+
Subjt:  KNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVNDKS

Query:  WTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDD----------------------------------------------------EIYKLID
        WTY Y  PNIPF DI +  DTLYATE  + +WKVEV+N +D                                                    E+YKLI 
Subjt:  WTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDD----------------------------------------------------EIYKLID

Query:  ERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSGKFILL
        E E+ MRRAV+VKSLDGDA+FIGDSQSICVSTK+FP       YF   +++ L
Subjt:  ERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPK------YFYSGKFILL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTTAAAAAGCAATATTGCTTATACAACCTCACAAAAAAATAGAACTCATCCCGTTGACTTCAAGTTTTGTTTCAACAAAAGGTGTTGTGGTTTCTCTTTTGGTTG
GTTGATCATGTGTGAAGAGACACTCGATCTTATTTTATTCGACCCTTTTTCTGGGACTGTGATTTGTCTTCCTTCCATTATCATAGATAATGAACCTAATTATAATCCAG
ACCGCGTAGTTAAAGCTATATTAACCAAAGATCCATCATTATATCCAAACGATTATATGGTTGTAGCTATCTATAGTTCATATTCAAGGTTATGCCTTATGAGAGTAAAT
GATAAGAGTTGGACGTATTCATATCTAGAACCAAATATTCCTTTTAAGGATATTACTGTTTATAGTGATACTTTATATGCTACGGAAAATAATATGATGATTTGGAAAGT
TGAAGTTAAGAATAGAGATGATGAAATCTACAAACTTATTGATGAGCGTGAAAATGGCATGCGAAGGGCCGTAAAGGTGAAGAGTTTAGATGGTGATGCTATGTTTATTG
GAGACTCTCAATCCATTTGTGTATCAACCAAGGATTTTCCTAAATATTTCTACTCGGGCAAATTTATACTTTTGGAGAAAAAAAAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTTAAAAAGCAATATTGCTTATACAACCTCACAAAAAAATAGAACTCATCCCGTTGACTTCAAGTTTTGTTTCAACAAAAGGTGTTGTGGTTTCTCTTTTGGTTG
GTTGATCATGTGTGAAGAGACACTCGATCTTATTTTATTCGACCCTTTTTCTGGGACTGTGATTTGTCTTCCTTCCATTATCATAGATAATGAACCTAATTATAATCCAG
ACCGCGTAGTTAAAGCTATATTAACCAAAGATCCATCATTATATCCAAACGATTATATGGTTGTAGCTATCTATAGTTCATATTCAAGGTTATGCCTTATGAGAGTAAAT
GATAAGAGTTGGACGTATTCATATCTAGAACCAAATATTCCTTTTAAGGATATTACTGTTTATAGTGATACTTTATATGCTACGGAAAATAATATGATGATTTGGAAAGT
TGAAGTTAAGAATAGAGATGATGAAATCTACAAACTTATTGATGAGCGTGAAAATGGCATGCGAAGGGCCGTAAAGGTGAAGAGTTTAGATGGTGATGCTATGTTTATTG
GAGACTCTCAATCCATTTGTGTATCAACCAAGGATTTTCCTAAATATTTCTACTCGGGCAAATTTATACTTTTGGAGAAAAAAAAATTTTGA
Protein sequenceShow/hide protein sequence
MVLKSNIAYTTSQKNRTHPVDFKFCFNKRCCGFSFGWLIMCEETLDLILFDPFSGTVICLPSIIIDNEPNYNPDRVVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRVN
DKSWTYSYLEPNIPFKDITVYSDTLYATENNMMIWKVEVKNRDDEIYKLIDERENGMRRAVKVKSLDGDAMFIGDSQSICVSTKDFPKYFYSGKFILLEKKKF