CuGenDBv2

Gene ID	CmoCh16G010770
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	ycf49-like protein
Genome location	Cmo_Chr16:7612189..7616306
RNA-Seq Expression	CmoCh16G010770
Synteny	CmoCh16G010770
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR019634 - Uncharacterised protein family Ycf49

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577584.1 hypothetical protein SDJN03_25158, partial [Cucurbita argyrosperma subsp. sororia]

6.8e-95

96.41

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Query:  IMSFSSTFLHSFSIPKCPISSSS-SSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQSSLLFNEPQNALSLPT
        +MSFSSTFLHSFSIPKCPISSSS SSLPTSR SAATSQLPTGIRLRRGGA RVLDSKSI+VLLGTGFTLS LGPA PSAATEFQSSLLFNEPQNALSLPT
Subjt:  IMSFSSTFLHSFSIPKCPISSSS-SSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQSSLLFNEPQNALSLPT

Query:  WAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL
        WAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL
Subjt:  WAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL

KAG7015633.1 hypothetical protein SDJN02_23270, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.8e-95

96.41

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Query:  IMSFSSTFLHSFSIPKCPI-SSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQSSLLFNEPQNALSLPT
        +MSFSSTFLHSFSIPKCPI SSSSSSLPTSR SAATSQLPTGIRLRRGGA RVLDSKSI+VLLGTGFTLS LGPA PSAATEFQSSLLFNEPQNALSLPT
Subjt:  IMSFSSTFLHSFSIPKCPI-SSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQSSLLFNEPQNALSLPT

Query:  WAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL
        WAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL
Subjt:  WAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL

XP_022923292.1 uncharacterized protein LOC111431033 [Cucurbita moschata]

2.5e-121

100

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Query:  MRKKRRNQNHRDDGDSLFSEQIFQCLLNFPPNFHIMSFSSTFLHSFSIPKCPISSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGF
        MRKKRRNQNHRDDGDSLFSEQIFQCLLNFPPNFHIMSFSSTFLHSFSIPKCPISSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGF
Subjt:  MRKKRRNQNHRDDGDSLFSEQIFQCLLNFPPNFHIMSFSSTFLHSFSIPKCPISSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGF

Query:  TLSFLGPASPSAATEFQSSLLFNEPQNALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQA
        TLSFLGPASPSAATEFQSSLLFNEPQNALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQA
Subjt:  TLSFLGPASPSAATEFQSSLLFNEPQNALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQA

Query:  MLTVIGNATMCIAAFRIYKSSQERSKNL
        MLTVIGNATMCIAAFRIYKSSQERSKNL
Subjt:  MLTVIGNATMCIAAFRIYKSSQERSKNL

XP_022965189.1 uncharacterized protein LOC111465121 [Cucurbita maxima]

2.7e-91

91.54

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Query:  MSFSSTFLHSFSIPKCPI--------SSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQSSLLFNEPQN
        MSFSSTFLHSFSIPKC I        SSSSSSLPTSR  AATSQLPTGIRLRRG AGRVLDSKSILVLLGTGFTLS L PA PSAATEFQSSLLFNEPQN
Subjt:  MSFSSTFLHSFSIPKCPI--------SSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQSSLLFNEPQN

Query:  ALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKN
        ALSLPTWA+HVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLV LQAMLTVIGNATMCIAAFRIYKSSQERSKN
Subjt:  ALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKN

Query:  L
        L
Subjt:  L

XP_023551730.1 uncharacterized protein LOC111809617 [Cucurbita pepo subsp. pepo]

1.1e-92

95.36

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Query:  MSFSSTFLHSFSIPKCPI-SSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQSSLLFNEPQNALSLPTW
        MSFSSTFLHSFSIPKCPI SSSSSSLPTSR SAATSQLPTGIRLRRGGAGRVLDSKSILVL+GTGFT S LGP S SAATEFQSSLLFNEPQNALSLPTW
Subjt:  MSFSSTFLHSFSIPKCPI-SSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQSSLLFNEPQNALSLPTW

Query:  AVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL
        AVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVP LGGA CACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL
Subjt:  AVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4G0 Uncharacterized protein

8.7e-72

76.68

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Query:  MSFSSTFLHSFSIPKCPISSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQSSLLFNEPQNALSLPTWA
        MS +S  L+SFSIPK P       LP S   A T QLPTG+  RR  +     SK+++VLLGTGFTL+ LGP S SAATE  SSLLFNEPQNALSLPTWA
Subjt:  MSFSSTFLHSFSIPKCPISSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQSSLLFNEPQNALSLPTWA

Query:  VHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL
        +HVS VVEWI AMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACT HFFYNSESLEVLVA+QAMLT IGNATMCIAAFRIYKSSQERSKNL
Subjt:  VHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL

A0A1S3BLS2 ycf49-like protein

1.0e-72

77.2

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Query:  MSFSSTFLHSFSIPKCPISSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQSSLLFNEPQNALSLPTWA
        MS +S  L+SFSIPK P       LP S   A T+QLPTG+  RR  +     SK+++VLLGTGFTL+ LGP S SAATE QSSLLFNEPQNALSLPTWA
Subjt:  MSFSSTFLHSFSIPKCPISSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQSSLLFNEPQNALSLPTWA

Query:  VHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL
        +HVS VVEWI AMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACT HFFYNSESLEVLVA+QAMLT IGNATMCIAAFRIYKSSQERSKNL
Subjt:  VHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL

A0A6J1DH09 uncharacterized protein LOC111020415

1.2e-73

79.4

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Query:  MSFSSTFLHSFSIPKCPISSSSSSL-PTSRASAATSQLPTGIRLRR-GGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQ----SSLLFNEPQNAL
        M  +ST LHSFS PKCPISSSSSS  P SR  AA S+ P GIR RR  GAG VLDSKS++VLLGTGFTL+ LGP S SAA E Q    SSL FNEPQNAL
Subjt:  MSFSSTFLHSFSIPKCPISSSSSSL-PTSRASAATSQLPTGIRLRR-GGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQ----SSLLFNEPQNAL

Query:  SLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL
        SLPTWA+HVS VVEWI AMALVWQYGEKSGNE+WKGLSWGMVPLLGGAFCACT HFFYNSESLEVLVALQA+LT +GNATMCIAAFRIYK SQERS+NL
Subjt:  SLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKNL

A0A6J1E5R7 uncharacterized protein LOC111431033

1.2e-121

100

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Query:  MRKKRRNQNHRDDGDSLFSEQIFQCLLNFPPNFHIMSFSSTFLHSFSIPKCPISSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGF
        MRKKRRNQNHRDDGDSLFSEQIFQCLLNFPPNFHIMSFSSTFLHSFSIPKCPISSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGF
Subjt:  MRKKRRNQNHRDDGDSLFSEQIFQCLLNFPPNFHIMSFSSTFLHSFSIPKCPISSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGF

Query:  TLSFLGPASPSAATEFQSSLLFNEPQNALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQA
        TLSFLGPASPSAATEFQSSLLFNEPQNALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQA
Subjt:  TLSFLGPASPSAATEFQSSLLFNEPQNALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQA

Query:  MLTVIGNATMCIAAFRIYKSSQERSKNL
        MLTVIGNATMCIAAFRIYKSSQERSKNL
Subjt:  MLTVIGNATMCIAAFRIYKSSQERSKNL

A0A6J1HN17 uncharacterized protein LOC111465121

1.3e-91

91.54

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Query:  MSFSSTFLHSFSIPKCPI--------SSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQSSLLFNEPQN
        MSFSSTFLHSFSIPKC I        SSSSSSLPTSR  AATSQLPTGIRLRRG AGRVLDSKSILVLLGTGFTLS L PA PSAATEFQSSLLFNEPQN
Subjt:  MSFSSTFLHSFSIPKCPI--------SSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASPSAATEFQSSLLFNEPQN

Query:  ALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKN
        ALSLPTWA+HVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLV LQAMLTVIGNATMCIAAFRIYKSSQERSKN
Subjt:  ALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSKN

Query:  L
        L
Subjt:  L

SwissProt top hits

e value

%identity

Alignment

P15811 Uncharacterized protein ycf49

5.0e-08

35.64

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Query:  NALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSK
        N LS  TW VH+S V+EW+  +     Y +   N S K   +        A CACTLHFF N      L+ LQ+ LT+  N T+  +   IYK    +++
Subjt:  NALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERSK

Query:  N
        N
Subjt:  N

Q55720 Ycf49-like protein

8.2e-27

58.59

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Query:  NALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERS
        NALS+PTW VHVS V+EWI A+ALV +Y  K+G   W+ L+WGMVP L  A CACT HFF N+  L+ LV LQA+ TVIGN T+C+AA+ IY+ S + S
Subjt:  NALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQERS

Arabidopsis top hits

e value

%identity

Alignment

AT4G22830.1 unknown protein

3.4e-44

60.36

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Query:  SSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASP--SAATEFQSSLLFNEPQNALSLPTWAVHVSIVVEWIAAMALVWQY
        S S P S  S  TS  P  IR+R      + D  ++  L+GT    +    A P  +A      SL  +EP NALSLPTWAVHVS VVEWI AMALVW+Y
Subjt:  SSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASP--SAATEFQSSLLFNEPQNALSLPTWAVHVSIVVEWIAAMALVWQY

Query:  GEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQE
        GE+ G ESWKGLSWGMVPLLGGA CACT HFFYN ESLEVLVALQA LTV GN T+CIAAFRI K S +
Subjt:  GEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQE

AT4G22830.2 unknown protein

3.4e-44

59.51

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Query:  SRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASP--SAATEFQSSLLFNEPQNALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGN
        S  S+ T+     IR+R      + D  ++  L+GT    +    A P  +A      SL  +EP NALSLPTWAVHVS VVEWI AMALVW+YGE+ G 
Subjt:  SRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASP--SAATEFQSSLLFNEPQNALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGN

Query:  ESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQE
        ESWKGLSWGMVPLLGGA CACT HFFYN ESLEVLVALQA LTV GN T+CIAAFRI K S +
Subjt:  ESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKSSQE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGGAAGAAGAGAAGAAACCAAAATCATAGAGATGATGGCGATTCGCTGTTTTCAGAGCAAATCTTTCAGTGTTTACTGAATTTTCCACCCAATTTTCATATCATGTC
GTTCTCTTCCACCTTCTTACATTCCTTCTCAATTCCCAAATGCCCCATTTCTTCTTCTTCTTCCTCACTGCCCACGTCCAGAGCTTCTGCCGCTACTTCTCAACTTCCTA
CCGGAATTCGACTCCGGAGAGGCGGCGCCGGTCGAGTTTTGGACTCGAAATCCATCCTGGTTTTGCTCGGCACTGGTTTCACTCTCTCCTTTCTGGGACCTGCATCGCCT
TCTGCTGCGACGGAATTCCAGTCTTCGCTTCTGTTTAACGAGCCCCAAAATGCTCTGTCCTTGCCCACCTGGGCCGTACATGTTTCCATCGTCGTTGAATGGATTGCAGC
AATGGCTTTGGTGTGGCAGTATGGAGAGAAATCTGGCAATGAGTCTTGGAAAGGACTTTCTTGGGGAATGGTACCCTTGCTAGGTGGAGCATTTTGTGCTTGCACATTGC
ATTTTTTCTACAATTCTGAGTCTCTTGAGGTATTGGTGGCCCTTCAGGCAATGCTAACGGTTATAGGAAATGCTACAATGTGCATTGCTGCATTTCGCATATACAAATCA
TCACAAGAGCGTTCAAAGAACTTGTAA

mRNA sequence

Show/hide mRNA sequence

TTTAGTGGGAAAATGAGGAAGAAGAGAAGAAACCAAAATCATAGAGATGATGGCGATTCGCTGTTTTCAGAGCAAATCTTTCAGTGTTTACTGAATTTTCCACCCAATTT
TCATATCATGTCGTTCTCTTCCACCTTCTTACATTCCTTCTCAATTCCCAAATGCCCCATTTCTTCTTCTTCTTCCTCACTGCCCACGTCCAGAGCTTCTGCCGCTACTT
CTCAACTTCCTACCGGAATTCGACTCCGGAGAGGCGGCGCCGGTCGAGTTTTGGACTCGAAATCCATCCTGGTTTTGCTCGGCACTGGTTTCACTCTCTCCTTTCTGGGA
CCTGCATCGCCTTCTGCTGCGACGGAATTCCAGTCTTCGCTTCTGTTTAACGAGCCCCAAAATGCTCTGTCCTTGCCCACCTGGGCCGTACATGTTTCCATCGTCGTTGA
ATGGATTGCAGCAATGGCTTTGGTGTGGCAGTATGGAGAGAAATCTGGCAATGAGTCTTGGAAAGGACTTTCTTGGGGAATGGTACCCTTGCTAGGTGGAGCATTTTGTG
CTTGCACATTGCATTTTTTCTACAATTCTGAGTCTCTTGAGGTATTGGTGGCCCTTCAGGCAATGCTAACGGTTATAGGAAATGCTACAATGTGCATTGCTGCATTTCGC
ATATACAAATCATCACAAGAGCGTTCAAAGAACTTGTAAAGGAAACTCAAGTCTCTGTTACACTAACGTATGTACGTACTACCACACCCTGTTTCATTATATATCATTAT
TTTTCATCCTCCAT

Protein sequence

Show/hide protein sequence

MRKKRRNQNHRDDGDSLFSEQIFQCLLNFPPNFHIMSFSSTFLHSFSIPKCPISSSSSSLPTSRASAATSQLPTGIRLRRGGAGRVLDSKSILVLLGTGFTLSFLGPASP
SAATEFQSSLLFNEPQNALSLPTWAVHVSIVVEWIAAMALVWQYGEKSGNESWKGLSWGMVPLLGGAFCACTLHFFYNSESLEVLVALQAMLTVIGNATMCIAAFRIYKS
SQERSKNL

CmoCh16G010770 (gene) of Cucurbita moschata (Rifu) v1 genome