CuGenDBv2

Gene ID	CmoCh16G011530
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	light-harvesting complex-like protein 3 isotype 1, chloroplastic
Genome location	Cmo_Chr16:8225685..8230064
RNA-Seq Expression	CmoCh16G011530
Synteny	CmoCh16G011530
Gene Ontology terms	GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6577656.1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.5e-141

77.75

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Query:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK
        MSSMALFSPPSRLSSLSPSSHHR+HFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVE AVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK
Subjt:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK

Query:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------------------
        WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN                             
Subjt:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------------------

Query:  ---------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSG--------------------------------------KANSTTNGRGN
                 VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSG                                      KANSTTNGRGN
Subjt:  ---------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSG--------------------------------------KANSTTNGRGN

Query:  GPADSGDIEGGKMGFEEEAGGDGSCTDGGGSRRREICRAGDYHFYTVTAMGVVRM
        GPADSGDIEGGKMGFEE+AGGDGSCTDGGGSRRREICRAGDYHFYTVTAMGVVRM
Subjt:  GPADSGDIEGGKMGFEEEAGGDGSCTDGGGSRRREICRAGDYHFYTVTAMGVVRM

KAG7015695.1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

8.5e-108

83.33

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Query:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK
        MSSMALFSPPSRLSSLSPSSHHR+HFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAV  AVVQKDPEPVVEKQE LAETNGSVAAVEEVVVVSKFEDPK
Subjt:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK

Query:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------------------
        WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN                             
Subjt:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------------------

Query:  ---------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK
                 VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK
Subjt:  ---------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK

XP_022923520.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita moschata]

2.4e-110

84.92

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Query:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK
        MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK
Subjt:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK

Query:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------------------
        WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN                             
Subjt:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------------------

Query:  ---------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK
                 VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK
Subjt:  ---------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK

XP_022965154.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita maxima]

3.8e-108

83.33

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Query:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK
        MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVE AVVQKDPEP VEK+E LAETNGSVAAVEEVVVVSKFEDPK
Subjt:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK

Query:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------------------
        WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN                             
Subjt:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------------------

Query:  ---------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK
                 VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK
Subjt:  ---------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK

XP_023552068.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita pepo subsp. pepo]

3.6e-106

82.54

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Query:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK
        MSSM+LFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAA NGAGISGGS+AVE AVVQKDPEPVVEKQE +AETNGSVAAVEEVVVVSKFEDPK
Subjt:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK

Query:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------------------
        WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN                             
Subjt:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------------------

Query:  ---------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK
                 VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK
Subjt:  ---------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5D8 Uncharacterized protein

8.9e-87

70.3

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Query:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSS--------WVAADNGAGISGGS--VAVESAVVQKDPEP---VVEKQEILAETNGSVAAV
        MSSMALFSP S LS+ SP SHH THF  RPFSSLR+RNPSS           ADNGAGISGGS  V+VE+ V QKDPEP     E+QE LA TNGSVAA 
Subjt:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSS--------WVAADNGAGISGGS--VAVESAVVQKDPEP---VVEKQEILAETNGSVAAV

Query:  EEVV-VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN---------------
        EEVV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LN               
Subjt:  EEVV-VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN---------------

Query:  -----------------------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK
                               VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET GSGK
Subjt:  -----------------------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK

A0A1S3BLD8 uncharacterized protein LOC103490842

3.1e-87

70.94

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Query:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSS---------WVAADNGAGISGGS--VAVESAVVQKDPEPVVEKQEILAETNGSVAAVEE
        MSSMALFSP S LS+LSPSSHH THF  RPFSSLR+RNPSS            ADNGAGISGGS  VAVE+ V QKDPEP    +E LA TNGSVAA EE
Subjt:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSS---------WVAADNGAGISGGS--VAVESAVVQKDPEPVVEKQEILAETNGSVAAVEE

Query:  VV-VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------
        VV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LN                 
Subjt:  VV-VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------

Query:  ---------------------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-KGSGK
                             VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET  GSGK
Subjt:  ---------------------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-KGSGK

A0A5A7TG76 Uncharacterized protein

3.1e-87

70.94

Show/hide

Query:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSS---------WVAADNGAGISGGS--VAVESAVVQKDPEPVVEKQEILAETNGSVAAVEE
        MSSMALFSP S LS+LSPSSHH THF  RPFSSLR+RNPSS            ADNGAGISGGS  VAVE+ V QKDPEP    +E LA TNGSVAA EE
Subjt:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSS---------WVAADNGAGISGGS--VAVESAVVQKDPEPVVEKQEILAETNGSVAAVEE

Query:  VV-VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------
        VV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LN                 
Subjt:  VV-VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------

Query:  ---------------------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-KGSGK
                             VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET  GSGK
Subjt:  ---------------------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET-KGSGK

A0A6J1EC24 light-harvesting complex-like protein 3 isotype 1, chloroplastic

1.2e-110

84.92

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Query:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK
        MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK
Subjt:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK

Query:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------------------
        WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN                             
Subjt:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------------------

Query:  ---------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK
                 VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK
Subjt:  ---------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK

A0A6J1HQ78 light-harvesting complex-like protein 3 isotype 1, chloroplastic

1.9e-108

83.33

Show/hide

Query:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK
        MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVE AVVQKDPEP VEK+E LAETNGSVAAVEEVVVVSKFEDPK
Subjt:  MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPK

Query:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------------------
        WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN                             
Subjt:  WVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-----------------------------

Query:  ---------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK
                 VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK
Subjt:  ---------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGK

SwissProt top hits

e value

%identity

Alignment

Q6NKS4 Light-harvesting complex-like protein 3 isotype 2, chloroplastic

2.6e-43

43.53

Show/hide

Query:  SMALFSPPSRLSSLSPS---SHHRTHFPSRPFSSLRSRNPSSWVAADNGAGI------SGGSVAVESAVVQKDPEPVVEKQEILAETNGSV---AAVEEV
        SMALFSPP   S  +P+       +   ++ FS +     SS    DNG            SVAVE   V+   E         A  NG+V   A     
Subjt:  SMALFSPPSRLSSLSPS---SHHRTHFPSRPFSSLRSRNPSSWVAADNGAGI------SGGSVAVESAVVQKDPEPVVEKQEILAETNGSV---AAVEEV

Query:  VVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-------------------
          V K+++ KWVNGTWDL QF KDG TDWD+VI +EA+RRKWLE+NPE++SN++ V+FDTSI+PWWAW+KRYHLPEAE+LN                   
Subjt:  VVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-------------------

Query:  -------------------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQD
                           V GVL IRKNED++ LK L DETT YDKQWQA W++
Subjt:  -------------------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQD

Q9SYX1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic

6.5e-50

46.04

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Query:  MALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPS----SWVAADNGAGISGGSVAVES----AVVQKDP---EPVVEKQEILAETNGSVAAVEEVVV
        MALFSPP   SSL     +    P   FS L S   S    +  ++D+G+     +V+VE+     V+ K+P    P V+K+E     N +V   E    
Subjt:  MALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPS----SWVAADNGAGISGGSVAVES----AVVQKDP---EPVVEKQEILAETNGSVAAVEEVVV

Query:  --VSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-------------------
          V KF+D +W+NGTWDL QF KDG TDWD+VI AEA+RRKWLE NPE++SN++PVLFDTSI+PWWAWIKRYHLPEAE+LN                   
Subjt:  --VSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-------------------

Query:  -------------------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETKGSGK
                           V GVL IRKNED++ LK L DETT YDKQWQA W+   DE+ GS K
Subjt:  -------------------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETKGSGK

Arabidopsis top hits

e value

%identity

Alignment

AT4G17600.1 Chlorophyll A-B binding family protein

4.6e-51

46.04

Show/hide

Query:  MALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPS----SWVAADNGAGISGGSVAVES----AVVQKDP---EPVVEKQEILAETNGSVAAVEEVVV
        MALFSPP   SSL     +    P   FS L S   S    +  ++D+G+     +V+VE+     V+ K+P    P V+K+E     N +V   E    
Subjt:  MALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPS----SWVAADNGAGISGGSVAVES----AVVQKDP---EPVVEKQEILAETNGSVAAVEEVVV

Query:  --VSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-------------------
          V KF+D +W+NGTWDL QF KDG TDWD+VI AEA+RRKWLE NPE++SN++PVLFDTSI+PWWAWIKRYHLPEAE+LN                   
Subjt:  --VSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-------------------

Query:  -------------------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETKGSGK
                           V GVL IRKNED++ LK L DETT YDKQWQA W+   DE+ GS K
Subjt:  -------------------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DETKGSGK

AT5G47110.1 Chlorophyll A-B binding family protein

1.9e-44

43.53

Show/hide

Query:  SMALFSPPSRLSSLSPS---SHHRTHFPSRPFSSLRSRNPSSWVAADNGAGI------SGGSVAVESAVVQKDPEPVVEKQEILAETNGSV---AAVEEV
        SMALFSPP   S  +P+       +   ++ FS +     SS    DNG            SVAVE   V+   E         A  NG+V   A     
Subjt:  SMALFSPPSRLSSLSPS---SHHRTHFPSRPFSSLRSRNPSSWVAADNGAGI------SGGSVAVESAVVQKDPEPVVEKQEILAETNGSV---AAVEEV

Query:  VVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-------------------
          V K+++ KWVNGTWDL QF KDG TDWD+VI +EA+RRKWLE+NPE++SN++ V+FDTSI+PWWAW+KRYHLPEAE+LN                   
Subjt:  VVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILN-------------------

Query:  -------------------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQD
                           V GVL IRKNED++ LK L DETT YDKQWQA W++
Subjt:  -------------------VVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTCCATGGCTTTGTTTTCTCCTCCCTCTCGCCTTTCCTCACTCTCTCCTTCTTCACATCACCGAACCCACTTCCCCTCCAGACCCTTTTCCTCTCTCAGGTCCAG
AAACCCTTCTTCTTGGGTCGCTGCTGACAATGGCGCCGGAATTTCAGGTGGTTCCGTCGCTGTAGAATCCGCCGTCGTACAGAAGGATCCGGAGCCGGTGGTGGAAAAGC
AAGAGATCCTTGCTGAAACCAATGGGTCGGTGGCGGCTGTGGAAGAAGTGGTGGTGGTTAGCAAATTTGAAGACCCTAAATGGGTTAATGGGACTTGGGATTTGAATCAG
TTCCGGAAAGACGGAAGTACTGATTGGGATGCTGTTATTGATGCCGAGGCTAGGAGGAGGAAATGGCTGGAAAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGCT
GTTTGACACATCCATAGTTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTGCCAGAGGCTGAGATTCTCAATGTGGTGGGAGTTCTTTTGATCAGAAAGAACGAAGATA
TAGAGACTCTAAAGAAGTTGATTGATGAGACGACATTTTATGATAAACAATGGCAAGCAACTTGGCAGGATGAAACCAAAGGCTCAGGCAAAGCCAACTCAACAACAAAC
GGCCGAGGGAATGGTCCTGCAGATTCTGGCGACATTGAGGGTGGAAAGATGGGGTTTGAAGAGGAAGCAGGTGGCGACGGGAGTTGTACGGACGGCGGAGGAAGTAGAAG
GAGGGAGATTTGCAGAGCCGGAGATTATCATTTCTACACCGTGACGGCGATGGGAGTTGTACGTATGTAA

mRNA sequence

Show/hide mRNA sequence

TGCAAAGCTTCCCTATCCATCACAATTACAAGGCTGAGGATAGAGGAGGAGCTCTCTCTTCTTCCTTCCACACCAAAACAATGTCTTCCATGGCTTTGTTTTCTCCTCCC
TCTCGCCTTTCCTCACTCTCTCCTTCTTCACATCACCGAACCCACTTCCCCTCCAGACCCTTTTCCTCTCTCAGGTCCAGAAACCCTTCTTCTTGGGTCGCTGCTGACAA
TGGCGCCGGAATTTCAGGTGGTTCCGTCGCTGTAGAATCCGCCGTCGTACAGAAGGATCCGGAGCCGGTGGTGGAAAAGCAAGAGATCCTTGCTGAAACCAATGGGTCGG
TGGCGGCTGTGGAAGAAGTGGTGGTGGTTAGCAAATTTGAAGACCCTAAATGGGTTAATGGGACTTGGGATTTGAATCAGTTCCGGAAAGACGGAAGTACTGATTGGGAT
GCTGTTATTGATGCCGAGGCTAGGAGGAGGAAATGGCTGGAAAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGCTGTTTGACACATCCATAGTTCCTTGGTGGGC
TTGGATTAAGCGCTACCATCTGCCAGAGGCTGAGATTCTCAATGTGGTGGGAGTTCTTTTGATCAGAAAGAACGAAGATATAGAGACTCTAAAGAAGTTGATTGATGAGA
CGACATTTTATGATAAACAATGGCAAGCAACTTGGCAGGATGAAACCAAAGGCTCAGGCAAAGCCAACTCAACAACAAACGGCCGAGGGAATGGTCCTGCAGATTCTGGC
GACATTGAGGGTGGAAAGATGGGGTTTGAAGAGGAAGCAGGTGGCGACGGGAGTTGTACGGACGGCGGAGGAAGTAGAAGGAGGGAGATTTGCAGAGCCGGAGATTATCA
TTTCTACACCGTGACGGCGATGGGAGTTGTACGTATGTAA

Protein sequence

Show/hide protein sequence

MSSMALFSPPSRLSSLSPSSHHRTHFPSRPFSSLRSRNPSSWVAADNGAGISGGSVAVESAVVQKDPEPVVEKQEILAETNGSVAAVEEVVVVSKFEDPKWVNGTWDLNQ
FRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVLFDTSIVPWWAWIKRYHLPEAEILNVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETKGSGKANSTTN
GRGNGPADSGDIEGGKMGFEEEAGGDGSCTDGGGSRRREICRAGDYHFYTVTAMGVVRM

CmoCh16G011530 (gene) of Cucurbita moschata (Rifu) v1 genome