CuGenDBv2

Gene ID	CmoCh16G011830
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1
Genome location	Cmo_Chr16:8443378..8443817
RNA-Seq Expression	CmoCh16G011830
Synteny	CmoCh16G011830
Gene Ontology terms	NA
InterPro domains	IPR043459 - NFD6/NOXY2-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7015719.1 hypothetical protein SDJN02_23356, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-44

98.02

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
        MASACRRIASRISQSSIRTVVRTNSPPKASS PFTLPFNCTAPSVRRFSLARAPSELGC+QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS

Query:  L
        L
Subjt:  L

XP_022923170.1 uncharacterized protein LOC111430946 isoform X1 [Cucurbita moschata]

9.8e-46

100

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
        MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS

Query:  L
        L
Subjt:  L

XP_022923171.1 uncharacterized protein LOC111430946 isoform X2 [Cucurbita moschata]

8.0e-40

100

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

XP_022965218.1 uncharacterized protein LOC111465140 isoform X1 [Cucurbita maxima]

6.3e-45

99.01

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
        MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLA APSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS

Query:  L
        L
Subjt:  L

XP_023551885.1 uncharacterized protein LOC111809723 isoform X1 [Cucurbita pepo subsp. pepo]

2.0e-43

96.04

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
        MASACRRIASRISQSS RTVVRTNSPPKASSSPFTLPFN TAPSVRRFSLA++PSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS

Query:  L
        L
Subjt:  L

TrEMBL top hits

e value

%identity

Alignment

A0A6J1E633 uncharacterized protein LOC111430946 isoform X2

3.9e-40

100

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

A0A6J1EAY8 uncharacterized protein LOC111430946 isoform X1

4.7e-46

100

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
        MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS

Query:  L
        L
Subjt:  L

A0A6J1HL39 uncharacterized protein LOC111465140 isoform X3

2.5e-39

95.74

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTL
        MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLA APSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ  +
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTL

A0A6J1HN90 uncharacterized protein LOC111465140 isoform X1

3.1e-45

99.01

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
        MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLA APSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPS

Query:  L
        L
Subjt:  L

A0A6J1HQE3 uncharacterized protein LOC111465140 isoform X2

2.5e-39

98.9

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Query:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLA APSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

SwissProt top hits

e value

%identity

Alignment

Q6NNL9 Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial

6.0e-06

39.22

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Query:  MASACRRIASRISQSSIRTVVRTNS-PPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSP
        MAS CR + S+ + S+ R+ +   S  PK++SS   +P     PS      +R   +LG +QSLLP ++AVA AR+ SCL  +S++ R+L+QG LC  +P
Subjt:  MASACRRIASRISQSSIRTVVRTNS-PPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSP

Query:  SL
         +
Subjt:  SL

Arabidopsis top hits

e value

%identity

Alignment

AT4G17310.1 unknown protein

1.1e-23

61.17

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Query:  MASACRRIASRISQSSIRTVVR--TNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTS
        MASACR++ +R S SS+++ +R  T S   ASS+ F LP   T    R FS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RALSQGTLCCTS
Subjt:  MASACRRIASRISQSSIRTVVR--TNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTS

Query:  PSL
        P L
Subjt:  PSL

AT4G17310.2 unknown protein

3.2e-18

58.06

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Query:  MASACRRIASRISQSSIRTVVR--TNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ
        MASACR++ +R S SS+++ +R  T S   ASS+ F LP   T    R FS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RALSQ
Subjt:  MASACRRIASRISQSSIRTVVR--TNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ

AT5G47455.1 unknown protein

7.8e-17

51.55

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Query:  RIASRISQSSIRTVVRT----------NSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        R  SR S SS ++ +R+          +SP  ASS+ F +P    A  + RFS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RAL+QGT
Subjt:  RIASRISQSSIRTVVRT----------NSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

AT5G47455.6 unknown protein

7.8e-17

51.55

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Query:  RIASRISQSSIRTVVRT----------NSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        R  SR S SS ++ +R+          +SP  ASS+ F +P    A  + RFS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RAL+QGT
Subjt:  RIASRISQSSIRTVVRT----------NSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

AT5G47455.7 unknown protein

7.8e-17

51.55

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Query:  RIASRISQSSIRTVVRT----------NSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT
        R  SR S SS ++ +R+          +SP  ASS+ F +P    A  + RFS +R PSELGCVQSLLP H+ VA AR+ SCLST SRS RAL+QGT
Subjt:  RIASRISQSSIRTVVRT----------NSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT

Sequences

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CDS sequence

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ATGGCTTCCGCTTGCCGAAGAATTGCGAGCAGAATCTCTCAATCCTCCATCAGAACAGTTGTTCGTACAAATTCGCCGCCCAAAGCTTCATCTTCTCCGTTCACTTTACC
TTTCAATTGCACTGCACCATCTGTTCGCCGGTTCTCGCTCGCCAGGGCCCCGTCGGAGCTGGGATGCGTGCAATCTCTTTTGCCTTTTCACAACGCGGTTGCTGGAGCGA
GAATGATTTCGTGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTACTCTCTGCTGCACCTCTCCCAGCCTCTAA

mRNA sequence

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AATTTACAGATCTCTCATCTTCTTTCATGGCTTCCGCTTGCCGAAGAATTGCGAGCAGAATCTCTCAATCCTCCATCAGAACAGTTGTTCGTACAAATTCGCCGCCCAAA
GCTTCATCTTCTCCGTTCACTTTACCTTTCAATTGCACTGCACCATCTGTTCGCCGGTTCTCGCTCGCCAGGGCCCCGTCGGAGCTGGGATGCGTGCAATCTCTTTTGCC
TTTTCACAACGCGGTTGCTGGAGCGAGAATGATTTCGTGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTACTCTCTGCTGCACCTCTCCCAGCCTCT
AA

Protein sequence

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MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL

CmoCh16G011830 (gene) of Cucurbita moschata (Rifu) v1 genome