; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G012270 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G012270
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationCmo_Chr16:8790149..8792914
RNA-Seq ExpressionCmoCh16G012270
SyntenyCmoCh16G012270
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577725.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]8.6e-14097.54Show/hide
Query:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
        MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQ   SESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
Subjt:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP

Query:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
        GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
Subjt:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA

Query:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
        GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKK TVETLHLPESPKAAAPVPPEPQQRPKPEPAQ   L
Subjt:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL

KAG7015760.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-14599.65Show/hide
Query:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
        MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
Subjt:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP

Query:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
        GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
Subjt:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA

Query:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
        GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKK TVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
Subjt:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL

XP_022923202.1 binding partner of ACD11 1-like [Cucurbita moschata]3.2e-14298.95Show/hide
Query:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
        MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQ   SESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
Subjt:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP

Query:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
        GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
Subjt:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA

Query:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
        GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
Subjt:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL

XP_022965319.1 binding partner of ACD11 1-like [Cucurbita maxima]1.2e-13696.84Show/hide
Query:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
        MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQ   SESERSQIAYVTFKD QGAETA LLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
Subjt:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP

Query:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
        GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEK+SAGTVLVG+KVREVDQKFQVSEKTKSAFAVAEEKVSNA
Subjt:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA

Query:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
        GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKK TVETLHLPESPK AAPVPPEPQQRPKPEPAQGLIL
Subjt:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL

XP_023552502.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo]1.3e-14097.89Show/hide
Query:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
        MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQ   SESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTN P
Subjt:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP

Query:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
        GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
Subjt:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA

Query:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
        GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEED+KKK TVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
Subjt:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL

TrEMBL top hitse value%identityAlignment
A0A1S3BK74 binding partner of ACD11 1 isoform X22.2e-12085.07Show/hide
Query:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
        M +KTVKVSNVSLGASERD+KEFFSFSGDI Y+EMQ   SE+ERSQ AYVTFKD QGAETA+LLSGATIVDLSVNIT CPDY LPPEATAPPPAPGT  P
Subjt:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP

Query:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
        G AESA++KAEDVVS MLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEK+SAGT LV +KVREVDQKFQVSEKTKSAFAVAEEKVSNA
Subjt:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA

Query:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVE---TLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
        G+AIM NRYV SGTSWVADTFNKVAKAAGEVGQKTKEK+ V+EE+QKKK TVE    +HL ESPKAA+  P EPQQRPKPEPAQGLIL
Subjt:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVE---TLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL

A0A1S3BK81 binding partner of ACD11 1 isoform X17.4e-12185.42Show/hide
Query:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
        MS+KTVKVSNVSLGASERD+KEFFSFSGDI Y+EMQ   SE+ERSQ AYVTFKD QGAETA+LLSGATIVDLSVNIT CPDY LPPEATAPPPAPGT  P
Subjt:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP

Query:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
        G AESA++KAEDVVS MLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEK+SAGT LV +KVREVDQKFQVSEKTKSAFAVAEEKVSNA
Subjt:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA

Query:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVE---TLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
        G+AIM NRYV SGTSWVADTFNKVAKAAGEVGQKTKEK+ V+EE+QKKK TVE    +HL ESPKAA+  P EPQQRPKPEPAQGLIL
Subjt:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVE---TLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL

A0A5A7UH68 Binding partner of ACD11 1 isoform X22.2e-12085.07Show/hide
Query:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
        M +KTVKVSNVSLGASERD+KEFFSFSGDI Y+EMQ   SE+ERSQ AYVTFKD QGAETA+LLSGATIVDLSVNIT CPDY LPPEATAPPPAPGT  P
Subjt:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP

Query:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
        G AESA++KAEDVVS MLAKGFILGKDALNSAKAFDEKHQL+STASAKVATLDKKIGFTEK+SAGT LV +KVREVDQKFQVSEKTKSAFAVAEEKVSNA
Subjt:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA

Query:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVE---TLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
        G+AIM NRYV SGTSWVADTFNKVAKAAGEVGQKTKEK+ V+EE+QKKK TVE    +HL ESPKAA+  P EPQQRPKPEPAQGLIL
Subjt:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVE---TLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL

A0A6J1E5I8 binding partner of ACD11 1-like1.5e-14298.95Show/hide
Query:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
        MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQ   SESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
Subjt:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP

Query:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
        GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
Subjt:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA

Query:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
        GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
Subjt:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL

A0A6J1HQP2 binding partner of ACD11 1-like5.6e-13796.84Show/hide
Query:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
        MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQ   SESERSQIAYVTFKD QGAETA LLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
Subjt:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP

Query:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA
        GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEK+SAGTVLVG+KVREVDQKFQVSEKTKSAFAVAEEKVSNA
Subjt:  GTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNA

Query:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
        GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKK TVETLHLPESPK AAPVPPEPQQRPKPEPAQGLIL
Subjt:  GAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL

SwissProt top hitse value%identityAlignment
Q9LFD5 Binding partner of ACD11 15.9e-6758.14Show/hide
Query:  VKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAPGT
        V++VKV N+S GA+E D+KEFFSFSG++  +++Q     +E S  AYVTFK+TQGAETA+LLSGA+I D SV I   P+Y       +PP AP      +
Subjt:  VKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAPGT

Query:  -AESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNAG
         AES  QKAEDVVSSMLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++KL+AGT LV EK++ VDQ FQV+E+TKS +A AE+ VS+AG
Subjt:  -AESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNAG

Query:  AAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPE
        +A+M NRYV +G SW A  FN+VA+AAGEVGQKTKEK+   E +Q  +       LPE
Subjt:  AAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPE

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.7e-8867.54Show/hide
Query:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAP-PPAPGTNA
        M++ TVKVSNVSLGA++RDLKEFFSFSGDI Y+E Q   SE+ER+++AYVTFKD QGAETA+LLSGATIVD SV ++  PDY L PEA A   P     +
Subjt:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAP-PPAPGTNA

Query:  PGTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSN
        P   +S  +KAEDVVSSMLAKGFILGKDA+  AK+ DEKHQL+STASAKVA+ DKKIGFT+K++ GTV+VGEKVREVDQK+QVSEKTKSA A AE+ VSN
Subjt:  PGTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSN

Query:  AGAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVE--TLHLPESPKAAA
        AG+AIM NRYV +G +WV   FNKVAKAA EVGQK KEK+ ++EE+ K+K+  E   +HL ESPKAA+
Subjt:  AGAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVE--TLHLPESPKAAA

AT5G16840.1 binding partner of acd11 14.2e-6858.14Show/hide
Query:  VKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAPGT
        V++VKV N+S GA+E D+KEFFSFSG++  +++Q     +E S  AYVTFK+TQGAETA+LLSGA+I D SV I   P+Y       +PP AP      +
Subjt:  VKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAPGT

Query:  -AESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNAG
         AES  QKAEDVVSSMLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++KL+AGT LV EK++ VDQ FQV+E+TKS +A AE+ VS+AG
Subjt:  -AESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNAG

Query:  AAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPE
        +A+M NRYV +G SW A  FN+VA+AAGEVGQKTKEK+   E +Q  +       LPE
Subjt:  AAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPE

AT5G16840.2 binding partner of acd11 11.1e-6858.53Show/hide
Query:  VKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAPGT
        V++VKV N+S GA+E D+KEFFSFSG++  +++Q   S +E S  AYVTFK+TQGAETA+LLSGA+I D SV I   P+Y       +PP AP      +
Subjt:  VKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAPGT

Query:  -AESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNAG
         AES  QKAEDVVSSMLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++KL+AGT LV EK++ VDQ FQV+E+TKS +A AE+ VS+AG
Subjt:  -AESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNAG

Query:  AAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPE
        +A+M NRYV +G SW A  FN+VA+AAGEVGQKTKEK+   E +Q  +       LPE
Subjt:  AAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPE

AT5G16840.3 binding partner of acd11 18.5e-6958.08Show/hide
Query:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP
        M+V++VKV N+S GA+E D+KEFFSFSG++  +++Q     +E S  AYVTFK+TQGAETA+LLSGA+I D SV I   P+Y       +PP AP     
Subjt:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAP

Query:  GT-AESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSN
         + AES  QKAEDVVSSMLAKGFILGKDA+  AKAFDEKH  +STA+A VA+LD+KIG ++KL+AGT LV EK++ VDQ FQV+E+TKS +A AE+ VS+
Subjt:  GT-AESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSN

Query:  AGAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPE
        AG+A+M NRYV +G SW A  FN+VA+AAGEVGQKTKEK+   E +Q  +       LPE
Subjt:  AGAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.8e-8061.4Show/hide
Query:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAP----PPAPG
        MS+ TVKVSNVSL A+ERDLKEFFSFSGDIAY+E Q   SE++ S++AYVTFKD QGAETA+LL+G+TIVD SV +T  PDY LPP+A A       +  
Subjt:  MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAP----PPAPG

Query:  TNAPGTAE-SAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEE
        +++P   + S ++KAEDVVS M++KGF+LGKDA+  AK+ DEKHQL+STASA+V + DK+IGFTEK++ GT +V EKV+EVDQKFQV+EKTKSA A AE+
Subjt:  TNAPGTAE-SAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEE

Query:  KVSNAGAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKM----TVETLHLPESPKA
         VSNAG+AIM NRYV +G +WV   FN+V+KAA EVGQK KEK+ ++EE++++K      V  +HL ESPKA
Subjt:  KVSNAGAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKM----TVETLHLPESPKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTTAAAACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGAACGAGATCTCAAGGAGTTTTTTTCCTTCTCGGGCGACATTGCATATGTTGAAATGCAGAG
GTTGTGCAGTGAAAGTGAACGGTCTCAAATCGCTTACGTAACCTTTAAGGATACACAAGGAGCAGAGACTGCCATTCTTTTGTCTGGAGCGACAATAGTGGATCTTTCTG
TCAACATCACTCCATGTCCTGATTATGTGCTCCCCCCTGAAGCTACCGCACCACCCCCTGCCCCTGGAACTAATGCACCTGGAACGGCTGAATCCGCCTATCAGAAAGCA
GAGGATGTGGTCAGCAGTATGCTTGCTAAGGGCTTTATCTTGGGCAAAGATGCACTCAACTCTGCAAAGGCATTTGATGAGAAGCACCAATTATCTTCCACAGCTTCAGC
CAAAGTAGCTACATTGGATAAAAAAATCGGGTTCACTGAGAAACTTAGCGCTGGAACGGTTTTGGTGGGCGAAAAAGTTCGAGAAGTAGACCAGAAGTTTCAGGTTTCAG
AGAAGACTAAATCAGCATTTGCAGTTGCAGAAGAGAAAGTTAGCAATGCTGGAGCTGCCATTATGAGTAACCGATATGTAAAGAGTGGGACTAGCTGGGTTGCTGATACT
TTCAATAAGGTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAATCGCGGTGTCTGAAGAAGATCAGAAAAAGAAGATGACGGTCGAAACTTTGCATCT
CCCCGAATCCCCTAAAGCAGCAGCACCTGTGCCCCCTGAGCCTCAACAACGTCCCAAGCCCGAACCCGCTCAAGGTCTGATCCTCTAA
mRNA sequenceShow/hide mRNA sequence
TTCTTTCATCAGGGGCGACGAAGACTTGGACACACTGAGAGGCAATCCTAAATTCAGAATCAAGCTTTTCGTTCTAATTTCGTGTAGATTTCAGTTTTCCGGCGATCGTC
GGTTGATTCGATATCTGTTCCGGCGATTTATGTTCGTCATTTCTAGCAATGTCGGTTAAAACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGAACGAGATCTCAA
GGAGTTTTTTTCCTTCTCGGGCGACATTGCATATGTTGAAATGCAGAGGTTGTGCAGTGAAAGTGAACGGTCTCAAATCGCTTACGTAACCTTTAAGGATACACAAGGAG
CAGAGACTGCCATTCTTTTGTCTGGAGCGACAATAGTGGATCTTTCTGTCAACATCACTCCATGTCCTGATTATGTGCTCCCCCCTGAAGCTACCGCACCACCCCCTGCC
CCTGGAACTAATGCACCTGGAACGGCTGAATCCGCCTATCAGAAAGCAGAGGATGTGGTCAGCAGTATGCTTGCTAAGGGCTTTATCTTGGGCAAAGATGCACTCAACTC
TGCAAAGGCATTTGATGAGAAGCACCAATTATCTTCCACAGCTTCAGCCAAAGTAGCTACATTGGATAAAAAAATCGGGTTCACTGAGAAACTTAGCGCTGGAACGGTTT
TGGTGGGCGAAAAAGTTCGAGAAGTAGACCAGAAGTTTCAGGTTTCAGAGAAGACTAAATCAGCATTTGCAGTTGCAGAAGAGAAAGTTAGCAATGCTGGAGCTGCCATT
ATGAGTAACCGATATGTAAAGAGTGGGACTAGCTGGGTTGCTGATACTTTCAATAAGGTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAATCGCGGT
GTCTGAAGAAGATCAGAAAAAGAAGATGACGGTCGAAACTTTGCATCTCCCCGAATCCCCTAAAGCAGCAGCACCTGTGCCCCCTGAGCCTCAACAACGTCCCAAGCCCG
AACCCGCTCAAGGTCTGATCCTCTAAATTGTTGTCACATTTGTTGATATCTATGCCTGAAAGTTCTTGTAGCTGTAATGTGTATTTCACCTTCAAATCTGGCATGGCT
Protein sequenceShow/hide protein sequence
MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQRLCSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAPGTAESAYQKA
EDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNAGAAIMSNRYVKSGTSWVADT
FNKVAKAAGEVGQKTKEKIAVSEEDQKKKMTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL