; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G012280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G012280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGTPase
Genome locationCmo_Chr16:8794146..8797221
RNA-Seq ExpressionCmoCh16G012280
SyntenyCmoCh16G012280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577725.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-9698.37Show/hide
Query:  AYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNATKQISSTSVSK
        AYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNATKQISS+SVSK
Subjt:  AYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNATKQISSTSVSK

Query:  NPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN
        NPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFG LTPEAPRPRYGGRGWHGGVIREDI+QWMLQN
Subjt:  NPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN

KAG7015761.1 hypothetical protein SDJN02_23399 [Cucurbita argyrosperma subsp. argyrosperma]7.5e-10398.97Show/hide
Query:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT
        MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT
Subjt:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT

Query:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN
        KQISS+SVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFG LTPEAPRPRYGGRGWHGGVIREDIRQWMLQN
Subjt:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN

XP_022923349.1 uncharacterized protein LOC111431071 [Cucurbita moschata]5.2e-104100Show/hide
Query:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT
        MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT
Subjt:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT

Query:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN
        KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN
Subjt:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN

XP_022965321.1 uncharacterized protein LOC111465222 [Cucurbita maxima]5.0e-9996.39Show/hide
Query:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT
        MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKN T
Subjt:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT

Query:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN
        KQISS+ V KNPESSQVLKKPKSSRQLFTSSTN+WPKQFPTISMTMKPSNPATTMIQHRHFGILTPE PRPRY GRGWHGGVIREDIRQWMLQN
Subjt:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN

XP_023552504.1 uncharacterized protein LOC111810148 [Cucurbita pepo subsp. pepo]3.5e-10097.44Show/hide
Query:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT
        MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSP FPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSI NAT
Subjt:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT

Query:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVI-REDIRQWMLQN
        KQISS+SVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFG LTPEAPRPRYGGRGWHGGVI REDIRQWMLQN
Subjt:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVI-REDIRQWMLQN

TrEMBL top hitse value%identityAlignment
A0A0A0L6E7 Uncharacterized protein7.6e-8585.05Show/hide
Query:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT
        MVLWEITLGTAYFLGLKRTYRLALKLQRRI+SPK PKIRQF+ RRTR VFDVALKVHLNIQ+RDLEVGRNLGNWILRLLDRYKPSAQIRKQDG S+ NA 
Subjt:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT

Query:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN
        KQISS+S+ K PESSQ LKKPKSSRQLFTSSTN+WPKQFPTISM +K SNPA+ MIQHRHFGILTP A  P+Y  RGW GGVIR+DIRQWMLQN
Subjt:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN

A0A1S3BJL2 uncharacterized protein LOC1034907592.4e-8685.57Show/hide
Query:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT
        MVLWEITLGTAYFLGLKRTYRLALKLQRRI+SPK PKIRQF+HRRTR VFDVALKVHLNIQ+RDLEVGRNLGNWILRLLDRYKPSAQIRKQDG S+ NA 
Subjt:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT

Query:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN
        KQISS+S+ K PESSQ LKKPKSSRQLFTSSTN+WPKQFPTISM +K SNPA+ MIQHRHFGILTP AP P+Y  RGW GGVIREDIR+W+LQN
Subjt:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN

A0A6J1CW49 uncharacterized protein LOC1110148371.5e-7778.11Show/hide
Query:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRK-------QDG
        MVLWEITLGTAYFLGLKRTYRLALKLQRR+VSPK PKIR+FLH R R VFDVALKVH N+QQRDLEVGRNLGNWILR LDR+KPSAQIRK          
Subjt:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRK-------QDG

Query:  GSIKNATKQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQ
        GS  N TKQI S+SV KNPESSQ+LK PKSSRQLFTSSTN+W K FPTISM MK   PA TM QHRHFGI   EAPRP+Y  RGWH GVIREDIRQWMLQ
Subjt:  GSIKNATKQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQ

Query:  N
        N
Subjt:  N

A0A6J1E656 uncharacterized protein LOC1114310712.5e-104100Show/hide
Query:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT
        MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT
Subjt:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT

Query:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN
        KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN
Subjt:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN

A0A6J1HLD5 uncharacterized protein LOC1114652222.4e-9996.39Show/hide
Query:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT
        MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKN T
Subjt:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNAT

Query:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN
        KQISS+ V KNPESSQVLKKPKSSRQLFTSSTN+WPKQFPTISMTMKPSNPATTMIQHRHFGILTPE PRPRY GRGWHGGVIREDIRQWMLQN
Subjt:  KQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G32260.1 unknown protein3.5e-5053.73Show/hide
Query:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQ-----DGGS
        MV WEITLGTAYFLGL+RTYRLALK+QRR+V+PK PKIRQFLHRRTR +FDVA+ VH NIQ+RD+EVGRNLGNWILR LD+ KP+AQIR +     +  S
Subjt:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQ-----DGGS

Query:  IKNATKQISSTSVSK-NPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHF--GILTPEAPRPRYGGRGWHGGVIREDIRQWML
          +  K+++  S  K +  ++Q  +  +S R LFTS  +   K FP++SM ++P  P  T  Q+RH+  G L     +P Y   G   GV+R+DI QWM 
Subjt:  IKNATKQISSTSVSK-NPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHF--GILTPEAPRPRYGGRGWHGGVIREDIRQWML

Query:  Q
        Q
Subjt:  Q

AT2G35480.1 unknown protein1.2e-4252.04Show/hide
Query:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQI--RKQDGGSIKN
        MVLWE+ LGTAYFLG++RTYRLALK QRR+VSPK P+IR F+HRRT  +FD+AL+VH NIQQRD+ +GRNLGNWILR LDR KPSAQ+   K    SI  
Subjt:  MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQI--RKQDGGSIKN

Query:  ATKQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTM-KPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQ
        A + + ST + K   ++Q  +  +  R LF S  N   K +P  SM M KP     T  Q+R + +      +P Y  RG    VIR+DI QWM+Q
Subjt:  ATKQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTM-KPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTATGGGAGATCACTCTTGGAACAGCCTATTTCTTGGGGCTCAAGCGAACATATCGCCTCGCCCTCAAGCTTCAACGCCGTATCGTCAGCCCAAAGTTTCCCAA
GATCCGTCAGTTTCTTCACCGACGTACCCGTATCGTGTTTGATGTAGCATTAAAGGTTCATCTGAACATACAGCAGAGAGACTTAGAAGTTGGTCGGAATCTTGGTAACT
GGATTCTACGACTGCTCGACAGATATAAACCATCAGCTCAAATCCGTAAACAAGATGGTGGATCGATCAAAAACGCGACAAAGCAGATTTCCAGCACCTCCGTCTCGAAA
AATCCAGAGAGCTCCCAGGTCCTGAAGAAGCCAAAATCTTCTAGACAATTATTTACCTCATCAACAAACCTATGGCCTAAGCAATTTCCTACAATTTCCATGACGATGAA
GCCTTCAAACCCAGCCACAACTATGATCCAGCATAGACATTTTGGTATTTTGACACCTGAAGCGCCTCGACCAAGATACGGAGGAAGAGGATGGCATGGCGGGGTCATTC
GGGAGGATATAAGGCAATGGATGCTGCAAAACTAG
mRNA sequenceShow/hide mRNA sequence
CGAGTTGCAGAGAGAAGCAGAAGAAAGTTCTAGAGAGAGAGTGAAATGGTTCTATGGGAGATCACTCTTGGAACAGCCTATTTCTTGGGGCTCAAGCGAACATATCGCCT
CGCCCTCAAGCTTCAACGCCGTATCGTCAGCCCAAAGTTTCCCAAGATCCGTCAGTTTCTTCACCGACGTACCCGTATCGTGTTTGATGTAGCATTAAAGGTTCATCTGA
ACATACAGCAGAGAGACTTAGAAGTTGGTCGGAATCTTGGTAACTGGATTCTACGACTGCTCGACAGATATAAACCATCAGCTCAAATCCGTAAACAAGATGGTGGATCG
ATCAAAAACGCGACAAAGCAGATTTCCAGCACCTCCGTCTCGAAAAATCCAGAGAGCTCCCAGGTCCTGAAGAAGCCAAAATCTTCTAGACAATTATTTACCTCATCAAC
AAACCTATGGCCTAAGCAATTTCCTACAATTTCCATGACGATGAAGCCTTCAAACCCAGCCACAACTATGATCCAGCATAGACATTTTGGTATTTTGACACCTGAAGCGC
CTCGACCAAGATACGGAGGAAGAGGATGGCATGGCGGGGTCATTCGGGAGGATATAAGGCAATGGATGCTGCAAAACTAGGAACAAAAGTTCACTGTTCTCTTCCATTTT
GTTGAGACAGGAAGGATTCACATGAACATGCTACAACAAGATCATAGGACATCATCATGGCAACTGAAAACAGAAGCTGCACCAATTGAATGCTTAGATTTTCTGGTCTG
CTTCTTGGCGCTTGAACATTTGGTGGATAACTGGTTTTCTTTGGTTTCTGCGTACTGTTGTTACGAAAATTTATTAACATCGATCCAGAAGAGACTTCGTTAGAGGTTGA
TTCGCCTTTAGAAACATATATATGCTTTACAAGTTGTACCCTTTTGTTACCACAGAAAAGAAAAGTGAAGAATTTGCTCGTCTTTCTTGCA
Protein sequenceShow/hide protein sequence
MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNATKQISSTSVSK
NPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN