; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G012980 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G012980
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING-type domain-containing protein
Genome locationCmo_Chr16:9243423..9243848
RNA-Seq ExpressionCmoCh16G012980
SyntenyCmoCh16G012980
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052944.1 E3 ubiquitin-protein ligase RNF13 [Cucumis melo var. makuwa]6.1e-5473.83Show/hide
Query:  MVFNKLFFFFYNNLIGFRTSPT-LKQETPLPCSADSSLRPTTPDDC-VAALSSPEKALEGETCCVCLSCMGNK----DKDEGIGTSVLPCSHEFHKICLD
        MVFNK+FFFFYNN IGFR+ PT  KQ TPLP   +SSLRP   DDC + ALSS EKALEGETCCVCLS MGN     DK  G GTSVLPC HEFHK+C++
Subjt:  MVFNKLFFFFYNNLIGFRTSPT-LKQETPLPCSADSSLRPTTPDDC-VAALSSPEKALEGETCCVCLSCMGNK----DKDEGIGTSVLPCSHEFHKICLD

Query:  RWFEECRRTCPICRYSME--GGNNHEDGSNEMLTDEMVIWFSSFHTSGF
        RWFEECRRTCPICRYSME  GG +HED +N++LTDEMVIWFSSFHTSGF
Subjt:  RWFEECRRTCPICRYSME--GGNNHEDGSNEMLTDEMVIWFSSFHTSGF

KAE8649999.1 hypothetical protein Csa_010276, partial [Cucumis sativus]6.5e-5676.26Show/hide
Query:  LFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPDDC-VAALSSPEKALEGETCCVCLSCMGNKDK--DEGIGTSVLPCSHEFHKICLDRWFEECRR
        +FFFFYNNLIGFR+ P  KQ TPLP S +SSLRP   DDC + ALSS EKALEGETCCVCLS MGN D+  D+G+GTSVLPC HEFHK+C++RWFEECRR
Subjt:  LFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPDDC-VAALSSPEKALEGETCCVCLSCMGNKDK--DEGIGTSVLPCSHEFHKICLDRWFEECRR

Query:  TCPICRYSMEGGNNHEDGSNEMLTDEMVIWFSSFHTSGF
        TCPICRYSMEGG +HED +N++LTDEMVIWFSSFHTSGF
Subjt:  TCPICRYSMEGGNNHEDGSNEMLTDEMVIWFSSFHTSGF

KAG6577791.1 Protein goliath, partial [Cucurbita argyrosperma subsp. sororia]3.7e-7597.18Show/hide
Query:  MVFNKLFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPDDCVAALSSPEKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEEC
        MVFNKLFFFFYNNLIGFRTSPTLKQ TPLP SADSSLRP TPDDCVAALSSPEKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEEC
Subjt:  MVFNKLFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPDDCVAALSSPEKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEEC

Query:  RRTCPICRYSME-GGNNHEDGSNEMLTDEMVIWFSSFHTSGF
        RRTCPICRYSME GGNNHEDGSNEMLTDEMVIWFSSFHTSGF
Subjt:  RRTCPICRYSME-GGNNHEDGSNEMLTDEMVIWFSSFHTSGF

KAG7015830.1 Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma]7.4e-7697.89Show/hide
Query:  MVFNKLFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPDDCVAALSSPEKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEEC
        MVFNKLFFFFYNNLIGFRTSPTLKQ TPLP SADSSLRPTTPDDCVAALSSPEKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEEC
Subjt:  MVFNKLFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPDDCVAALSSPEKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEEC

Query:  RRTCPICRYSME-GGNNHEDGSNEMLTDEMVIWFSSFHTSGF
        RRTCPICRYSME GGNNHEDGSNEMLTDEMVIWFSSFHTSGF
Subjt:  RRTCPICRYSME-GGNNHEDGSNEMLTDEMVIWFSSFHTSGF

XP_038906276.1 E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida]1.4e-5876.03Show/hide
Query:  MVFNKLFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPDDC-VAALSSPEKALEGETCCVCLSCMGNK--DKDEGIG--TSVLPCSHEFHKICLDR
        MVFNK+FFFFYNN +GFR+    KQ TPLP   + SLRP TPDDC +  LSSPEKALEGETCCVCLS MGNK  D+D+G+G  TSVLPC HEFHK+C+DR
Subjt:  MVFNKLFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPDDC-VAALSSPEKALEGETCCVCLSCMGNK--DKDEGIG--TSVLPCSHEFHKICLDR

Query:  WFEECRRTCPICRYSMEGGNNHEDGSNEMLTDEMVIWFSSFHTSGF
        WFEECRRTCPICRYSMEGG +HEDG+N++LTDEMVIWFSSFHTSGF
Subjt:  WFEECRRTCPICRYSMEGGNNHEDGSNEMLTDEMVIWFSSFHTSGF

TrEMBL top hitse value%identityAlignment
A0A0A0L4W7 RING-type domain-containing protein5.2e-5976.39Show/hide
Query:  MVFNKLFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPDDC-VAALSSPEKALEGETCCVCLSCMGNKDK--DEGIGTSVLPCSHEFHKICLDRWF
        M+FNK+FFFFYNNLIGFR+ P  KQ TPLP S +SSLRP   DDC + ALSS EKALEGETCCVCLS MGN D+  D+G+GTSVLPC HEFHK+C++RWF
Subjt:  MVFNKLFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPDDC-VAALSSPEKALEGETCCVCLSCMGNKDK--DEGIGTSVLPCSHEFHKICLDRWF

Query:  EECRRTCPICRYSMEGGNNHEDGSNEMLTDEMVIWFSSFHTSGF
        EECRRTCPICRYSMEGG +HED +N++LTDEMVIWFSSFHTSGF
Subjt:  EECRRTCPICRYSMEGGNNHEDGSNEMLTDEMVIWFSSFHTSGF

A0A5D3CJ45 E3 ubiquitin-protein ligase RNF133.0e-5473.83Show/hide
Query:  MVFNKLFFFFYNNLIGFRTSPT-LKQETPLPCSADSSLRPTTPDDC-VAALSSPEKALEGETCCVCLSCMGNK----DKDEGIGTSVLPCSHEFHKICLD
        MVFNK+FFFFYNN IGFR+ PT  KQ TPLP   +SSLRP   DDC + ALSS EKALEGETCCVCLS MGN     DK  G GTSVLPC HEFHK+C++
Subjt:  MVFNKLFFFFYNNLIGFRTSPT-LKQETPLPCSADSSLRPTTPDDC-VAALSSPEKALEGETCCVCLSCMGNK----DKDEGIGTSVLPCSHEFHKICLD

Query:  RWFEECRRTCPICRYSME--GGNNHEDGSNEMLTDEMVIWFSSFHTSGF
        RWFEECRRTCPICRYSME  GG +HED +N++LTDEMVIWFSSFHTSGF
Subjt:  RWFEECRRTCPICRYSME--GGNNHEDGSNEMLTDEMVIWFSSFHTSGF

A0A6J1CW69 E3 ubiquitin-protein ligase SDIR1-like2.9e-4164.63Show/hide
Query:  MVFNKLFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPD-----DCVAALSSPEKALEGE-TCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLD
        MVFN++FFFFY N IGFR  P LKQ+T LP   DS+LR    D     DCV  LSS  KALEGE  CCVCLS +     +EGI TSVLPC HEFHK+C+D
Subjt:  MVFNKLFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPD-----DCVAALSSPEKALEGE-TCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLD

Query:  RWFEECRRTCPICRYSMEGGNNHEDGSNEMLTDEMVIWFSSFHTSGF
        RWFEE RRTCPICRYSMEG     +   ++LTDEMVIWFSSFHTSGF
Subjt:  RWFEECRRTCPICRYSMEGGNNHEDGSNEMLTDEMVIWFSSFHTSGF

A0A7N2R4T7 RING-type domain-containing protein2.7e-2347.95Show/hide
Query:  MVFNKLFFFFYNNLIG----FRTSPTLKQETPLPCSADSSLRPTTPDDCVAALSSPEKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRW
        MVF KL  F YN+LIG     R  PT  +       A S L   + D+ V      E  +EGE CCVCLS +  K ++E      LPC HEFHKIC+DRW
Subjt:  MVFNKLFFFFYNNLIG----FRTSPTLKQETPLPCSADSSLRPTTPDDCVAALSSPEKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRW

Query:  FEE-CRRTCPICRYSMEGGNNHEDGSNEMLTDEMVIWFSSFHTSGF
        F   CR+TCP+CR+SM G +     + ++LTDEMVIWFSSFH +GF
Subjt:  FEE-CRRTCPICRYSMEGGNNHEDGSNEMLTDEMVIWFSSFHTSGF

A0A803PEM7 Uncharacterized protein1.4e-2444.68Show/hide
Query:  MVFNKLFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPDDCVAALSSPEKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEEC
        MVFN L    YNN +  +  P +K E P  C  D        D+ +A  ++     EGE CCVCLS +      EG  TS+LPC HEFHK C++RWF  C
Subjt:  MVFNKLFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPDDCVAALSSPEKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEEC

Query:  RRTCPICRYSMEGGNNHEDGSNEMLTDEMVIWFSSFHTSGF
        R+TCP+CR++ME    +  G  E  T+EM+I+FSSFH +GF
Subjt:  RRTCPICRYSMEGGNNHEDGSNEMLTDEMVIWFSSFHTSGF

SwissProt top hitse value%identityAlignment
F4HZZ5 Receptor homology region, transmembrane domain- and RING domain-containing protein 56.9e-0833.33Show/hide
Query:  EKALEGETCCVCLS--CMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGNN
        E++    TC +C+   C+G K         +LPC H++H +C+D W   CR  CP+C+ +   GN+
Subjt:  EKALEGETCCVCLS--CMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGNN

Q4R6Y5 E3 ubiquitin-protein ligase ZNRF41.4e-0835.21Show/hide
Query:  ETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEEC-RRTCPICRYSMEGGNNHEDGSNEMLTDE
        + C +CL      + +EG    +LPCSH +H  C+D WF +  RR+CP+C+ S+ G  +  D + +  +DE
Subjt:  ETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEEC-RRTCPICRYSMEGGNNHEDGSNEMLTDE

Q5XIL0 E3 ubiquitin-protein ligase RNF1679.0e-0832.39Show/hide
Query:  EKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGNNHEDGSNE
        +K  E + C +CL      + ++G    +LPC+H +H  C+D W  + R+TCPIC+  +  G   E+   E
Subjt:  EKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGNNHEDGSNE

Q91XF4 E3 ubiquitin-protein ligase RNF1675.3e-0832.89Show/hide
Query:  EKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGNNHEDGSNEMLTDE
        +K  E + C +CL      + ++G    VLPC+H +H  C+D W  + R+TCPIC+  +  G   E+   E    E
Subjt:  EKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGNNHEDGSNEMLTDE

Q9H6Y7 E3 ubiquitin-protein ligase RNF1675.3e-0833.8Show/hide
Query:  EKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGNNHEDGSNE
        +K  + + C +CL      + ++G    VLPC+H +H  C+D W  + R+TCPIC+  +  G   ED   E
Subjt:  EKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGNNHEDGSNE

Arabidopsis top hitse value%identityAlignment
AT1G24580.1 RING/U-box superfamily protein7.1e-0842.86Show/hide
Query:  EKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICR
        E+  +G  CCVCL   G K+++E   + ++ C H FH+ CLD WF     TCP+CR
Subjt:  EKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICR

AT1G35625.1 RING/U-box superfamily protein1.4e-0836.67Show/hide
Query:  EGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGNN
        EG T   C  C+   D   G    +LPC H++H +C+D W   CR  CP+C+ +   GN+
Subjt:  EGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGNN

AT1G35630.1 Protease-associated (PA) RING/U-box zinc finger family protein4.9e-0933.33Show/hide
Query:  EKALEGETCCVCLS--CMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGNN
        E++    TC +C+   C+G K         +LPC H++H +C+D W   CR  CP+C+ +   GN+
Subjt:  EKALEGETCCVCLS--CMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGNN

AT3G51325.1 RING/U-box superfamily protein1.5e-1345.12Show/hide
Query:  EGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRR-TCPICRYSMEGGNNHEDGSNEMLTDEMVIWFSSFH
        E E C VCL  M  KD  +      LPCSHEFH +C+D WF   R+  CP+CR+S          +  +LTDE+++WFSSFH
Subjt:  EGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRR-TCPICRYSMEGGNNHEDGSNEMLTDEMVIWFSSFH

AT4G32600.1 RING/U-box superfamily protein1.9e-0835.05Show/hide
Query:  SADSSLRPTTPDDCVAALSSPEKALEGE--TCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGNNHEDGSNEMLT
        + D +   T+    VAA +  E+A+ GE   CC+CL+   N ++        LPCSH FHK C+D+W  +   +CP+C+ S  G  N +  S  +LT
Subjt:  SADSSLRPTTPDDCVAALSSPEKALEGE--TCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGGNNHEDGSNEMLT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTCAACAAGCTCTTCTTCTTCTTCTACAACAACCTCATCGGCTTCCGAACCAGCCCGACACTCAAGCAAGAAACCCCGCTTCCTTGTAGTGCCGATTCGAGCCT
TCGACCTACGACACCTGATGATTGTGTCGCAGCTCTTTCGAGTCCTGAGAAGGCGTTGGAAGGCGAGACATGTTGCGTATGCTTGTCGTGTATGGGGAACAAGGACAAAG
ACGAGGGAATTGGCACGAGTGTTCTTCCTTGCTCGCACGAGTTTCATAAGATATGTCTCGATCGATGGTTCGAAGAGTGTCGGAGAACTTGTCCGATATGCCGATATTCA
ATGGAAGGAGGGAATAATCATGAAGATGGGAGTAATGAAATGCTAACGGATGAGATGGTGATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTCAACAAGCTCTTCTTCTTCTTCTACAACAACCTCATCGGCTTCCGAACCAGCCCGACACTCAAGCAAGAAACCCCGCTTCCTTGTAGTGCCGATTCGAGCCT
TCGACCTACGACACCTGATGATTGTGTCGCAGCTCTTTCGAGTCCTGAGAAGGCGTTGGAAGGCGAGACATGTTGCGTATGCTTGTCGTGTATGGGGAACAAGGACAAAG
ACGAGGGAATTGGCACGAGTGTTCTTCCTTGCTCGCACGAGTTTCATAAGATATGTCTCGATCGATGGTTCGAAGAGTGTCGGAGAACTTGTCCGATATGCCGATATTCA
ATGGAAGGAGGGAATAATCATGAAGATGGGAGTAATGAAATGCTAACGGATGAGATGGTGATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA
Protein sequenceShow/hide protein sequence
MVFNKLFFFFYNNLIGFRTSPTLKQETPLPCSADSSLRPTTPDDCVAALSSPEKALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYS
MEGGNNHEDGSNEMLTDEMVIWFSSFHTSGF