CuGenDBv2

Gene ID	CmoCh16G013000
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Genome location	Cmo_Chr16:9259110..9259610
RNA-Seq Expression	CmoCh16G013000
Synteny	CmoCh16G013000
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR019685 - Protein of unknown function DUF2534

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577794.1 putative protein phosphatase 2C 60, partial [Cucurbita argyrosperma subsp. sororia]

2.8e-82

100

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Query:  MPIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIF
        MPIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIF
Subjt:  MPIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIF

Query:  LGLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGD
        LGLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGD
Subjt:  LGLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGD

KAG7015832.1 hypothetical protein SDJN02_23470, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-82

100

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Query:  MPIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIF
        MPIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIF
Subjt:  MPIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIF

Query:  LGLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGDS
        LGLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGDS
Subjt:  LGLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGDS

KGN53609.1 hypothetical protein Csa_014834 [Cucumis sativus]

4.1e-57

74.85

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Query:  IFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIFLG
        IFLLH  IVFY PFN KLP +F QSYL+IK D +N  V CSYPLLSS+AFAAF LGY+LCF FS WKVASMVINKSLR+R+Y+LA T++ISLPLQIIFLG
Subjt:  IFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIFLG

Query:  LSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGD
        LSALW PDQP YS+++L+VF + FLCA AGEGILVIVPIADSLAAG DS +EDSG  LK AGD
Subjt:  LSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGD

XP_023007612.1 uncharacterized protein LOC111500190 [Cucurbita maxima]

7.6e-80

96.99

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Query:  MPIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIF
        MPIFLLH FIVFYKPFNDKLPA FTQSYLIIKQDFDNATVLC+YPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIF
Subjt:  MPIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIF

Query:  LGLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGDS
        LGLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAG DS WEDSGERLKNAGDS
Subjt:  LGLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGDS

XP_023553121.1 uncharacterized protein LOC111810623 [Cucurbita pepo subsp. pepo]

1.5e-59

76.36

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Query:  MPIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIF
        MPIF LH FIVFY PF D+LP AF QSYL+I+  FDNATVLC+YPLLSS+AF+ FG+GY+LCFLFSCWKVASMVINKSLR+RVY+LA TI+ISLP Q+IF
Subjt:  MPIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIF

Query:  LGLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGD
        LGLS LW PD+PAYSV ALVVF  TFLCAAAGE ILVIVPIADSLAAG  S W  +GE LK  GD
Subjt:  LGLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXN9 Uncharacterized protein

2.0e-57

74.85

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Query:  IFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIFLG
        IFLLH  IVFY PFN KLP +F QSYL+IK D +N  V CSYPLLSS+AFAAF LGY+LCF FS WKVASMVINKSLR+R+Y+LA T++ISLPLQIIFLG
Subjt:  IFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIFLG

Query:  LSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGD
        LSALW PDQP YS+++L+VF + FLCA AGEGILVIVPIADSLAAG DS +EDSG  LK AGD
Subjt:  LSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGD

A0A5A7UZP3 Uncharacterized protein

1.8e-55

73.01

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Query:  IFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIFLG
        IFLLH  IVFY PFN KLP +F QSYL+IK D +N  V CSYPLLSS+AFAAF LGY+LCF FS WKVASMVINKSLR+R+++LA T++ISL LQIIFLG
Subjt:  IFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIFLG

Query:  LSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGD
        LSALW PD P YS+++L+VF + FLCA AGEGILVIVPIADSLAAG DS +EDSG  LK AGD
Subjt:  LSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGD

A0A5D3D7N5 Uncharacterized protein

1.8e-55

73.01

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Query:  IFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIFLG
        IFLLH  IVFY PFN KLP +F QSYL+IK D +N  V CSYPLLSS+AFAAF LGY+LCF FS WKVASMVINKSLR+R+++LA T++ISL LQIIFLG
Subjt:  IFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIFLG

Query:  LSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGD
        LSALW PD P YS+++L+VF + FLCA AGEGILVIVPIADSLAAG DS +EDSG  LK AGD
Subjt:  LSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGD

A0A6J1KZ71 uncharacterized protein LOC111500190

3.7e-80

96.99

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Query:  MPIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIF
        MPIFLLH FIVFYKPFNDKLPA FTQSYLIIKQDFDNATVLC+YPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIF
Subjt:  MPIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIF

Query:  LGLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGDS
        LGLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAG DS WEDSGERLKNAGDS
Subjt:  LGLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGDS

A0A7N2MHV2 Uncharacterized protein

2.1e-38

57.72

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Query:  PIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIFL
        PI       VF  P  +KLP+ FT+S+++ K  F N  VLC YPLLS++AF +F + Y LCFLFSCWK  S+ INKSLRVR+Y LA ++L SL +QI+ L
Subjt:  PIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIFL

Query:  GLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGAD
        GLS+ W+P++ AY  VALVVF +TFLCAA GEG+LVI PIAD+LAAG +
Subjt:  GLSALWTPDQPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGAD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G57680.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 70 Blast hits to 70 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

2.3e-10

34.35

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Query:  KLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCW---KVASMVINKSLRVRVYSLASTILISLPLQIIFLGLSALWTPDQPAYS
        KLP  FT++Y  +  D D    LC+YPLLS++    F    +  +LF  W   ++  +VINK L+ RVY+L  ++   LPL+I+ L LS L   D+  + 
Subjt:  KLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCW---KVASMVINKSLRVRVYSLASTILISLPLQIIFLGLSALWTPDQPAYS

Query:  VVALVVFFTTFLCAAAGEGILVIVPIADSLA
         ++ + F + F        +LV  P++DS+A
Subjt:  VVALVVFFTTFLCAAAGEGILVIVPIADSLA

AT1G57680.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

2.3e-10

34.35

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Query:  KLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCW---KVASMVINKSLRVRVYSLASTILISLPLQIIFLGLSALWTPDQPAYS
        KLP  FT++Y  +  D D    LC+YPLLS++    F    +  +LF  W   ++  +VINK L+ RVY+L  ++   LPL+I+ L LS L   D+  + 
Subjt:  KLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCW---KVASMVINKSLRVRVYSLASTILISLPLQIIFLGLSALWTPDQPAYS

Query:  VVALVVFFTTFLCAAAGEGILVIVPIADSLA
         ++ + F + F        +LV  P++DS+A
Subjt:  VVALVVFFTTFLCAAAGEGILVIVPIADSLA

Sequences

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CDS sequence

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ATGCCAATTTTCCTCCTCCATACCTTCATCGTTTTCTACAAACCCTTCAACGACAAACTCCCCGCCGCCTTCACCCAAAGCTACCTCATAATCAAGCAAGATTTCGACAA
TGCCACCGTCCTATGCTCCTACCCTCTCTTAAGCTCCATGGCCTTCGCCGCCTTCGGCCTCGGCTACATCCTCTGCTTCCTCTTCTCTTGCTGGAAAGTGGCCTCCATGG
TCATCAACAAATCCCTCAGGGTTCGTGTCTATAGCCTCGCCTCCACCATTTTGATTTCCTTGCCCTTGCAGATTATATTCCTTGGTCTCTCCGCCCTCTGGACCCCCGAC
CAGCCCGCTTACTCCGTCGTCGCCTTGGTCGTCTTTTTCACTACTTTTCTATGCGCCGCCGCCGGGGAGGGTATTTTGGTCATTGTCCCCATTGCTGATTCCTTGGCCGC
CGGTGCTGATTCTGTTTGGGAGGATTCCGGTGAGCGGTTAAAGAATGCTGGCGACAGTTGA

mRNA sequence

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Protein sequence

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MPIFLLHTFIVFYKPFNDKLPAAFTQSYLIIKQDFDNATVLCSYPLLSSMAFAAFGLGYILCFLFSCWKVASMVINKSLRVRVYSLASTILISLPLQIIFLGLSALWTPD
QPAYSVVALVVFFTTFLCAAAGEGILVIVPIADSLAAGADSVWEDSGERLKNAGDS

CmoCh16G013000 (gene) of Cucurbita moschata (Rifu) v1 genome