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CmoCh16G013030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G013030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr16:9275144..9275551
RNA-Seq ExpressionCmoCh16G013030
SyntenyCmoCh16G013030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN82016.1 hypothetical protein VITISV_034433 [Vitis vinifera]4.1e-0746.88Show/hide
Query:  LTRTIVDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLEIEIRREEMTGIQIQICSAFCTTID
        L   ++ GLE+ P+LVLFLE EL GVD  + + A V+G+E+E+R EE+ G+++++ SAF T +D
Subjt:  LTRTIVDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLEIEIRREEMTGIQIQICSAFCTTID

KAF5462937.1 hypothetical protein F2P56_018900 [Juglans regia]1.8e-1040.62Show/hide
Query:  ISTLRGNPKLLDLESVSRSSGNNLARSEVVLT------RTIV-------------------------DGLEEWPELVLFLEPELGGVDQGKRKRALVSGL
        +S  R + K LDLE +  SSG +LAR+ V LT      RT+V                         DGLEE  +LVL LEPE G VD  + KR LVSGL
Subjt:  ISTLRGNPKLLDLESVSRSSGNNLARSEVVLT------RTIV-------------------------DGLEEWPELVLFLEPELGGVDQGKRKRALVSGL

Query:  EIEIRREEMTGIQIQICSAFCTTIDGSH
        E+E+R EEM   ++++  A    +DGSH
Subjt:  EIEIRREEMTGIQIQICSAFCTTIDGSH

KAF7129361.1 hypothetical protein RHSIM_Rhsim10G0205700 [Rhododendron simsii]4.1e-0746.67Show/hide
Query:  IVDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLEIEIRREEMTGIQIQICSAFCTTID
        +++G EE  +LVLFLE E GGVD G+ + A V+GLE+E+R  E+ G+++++ SAF   +D
Subjt:  IVDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLEIEIRREEMTGIQIQICSAFCTTID

KAG4988045.1 hypothetical protein JHK85_031028 [Glycine max]5.4e-0749.25Show/hide
Query:  LTRTIVDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLEIEIRREEMTGIQIQICSAFCTTIDGSH
        L   +VDG EE  +LVL LE ELGGV  G+   ALV+G E+E+ R  M+G++IQ+ SA  T + G H
Subjt:  LTRTIVDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLEIEIRREEMTGIQIQICSAFCTTIDGSH

KAG5123654.1 hypothetical protein JHK82_030391 [Glycine max]1.4e-0750.75Show/hide
Query:  LTRTIVDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLEIEIRREEMTGIQIQICSAFCTTIDGSH
        L   +VDG EE  +LVL LE ELGGV  G+   ALV+G E+E+ R  M+G+QIQ+ SA  T + G H
Subjt:  LTRTIVDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLEIEIRREEMTGIQIQICSAFCTTIDGSH

TrEMBL top hitse value%identityAlignment
A0A498HVY7 Uncharacterized protein2.9e-0642.86Show/hide
Query:  LRGNPKLLDLESVSRSSGNNLARSEVVLTRTIVDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLEIEIRREEMTGIQIQICSAFCTTID
        L G+  LL   + S+ S + L      L   +V  LEE  +LVL +EPELG VD+ KR R+LVSGLE E+RR E+   ++Q+ SA    +D
Subjt:  LRGNPKLLDLESVSRSSGNNLARSEVVLTRTIVDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLEIEIRREEMTGIQIQICSAFCTTID

A0A6A2WCL8 Uncharacterized protein4.5e-0739.62Show/hide
Query:  STLRGNPKLLDLESVSRSSGNNLARSEVVLTRTI-------------------------------VDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLE
        S+ R N + L LE++ + SG++LA  ++ LT TI                               ++GLEE PELVLFLE E+G +D G+RK ALVS LE
Subjt:  STLRGNPKLLDLESVSRSSGNNLARSEVVLTRTI-------------------------------VDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLE

Query:  IEIRRE
        +EI RE
Subjt:  IEIRRE

A5CB28 Uncharacterized protein2.0e-0746.88Show/hide
Query:  LTRTIVDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLEIEIRREEMTGIQIQICSAFCTTID
        L   ++ GLE+ P+LVLFLE EL GVD  + + A V+G+E+E+R EE+ G+++++ SAF T +D
Subjt:  LTRTIVDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLEIEIRREEMTGIQIQICSAFCTTID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGATAATCAATATATTTCAACTCTCAGAGGAAATCCGAAGCTCCTTGATCTTGAATCTGTATCTAGGAGCTCGGGGAATAACCTGGCTAGGTCCGAAGTGGTACT
GACCAGGACTATCGTTGACGGTCTCGAAGAATGGCCGGAGCTTGTCCTCTTTCTCGAGCCTGAACTTGGTGGAGTCGATCAAGGAAAACGAAAGCGTGCCCTTGTTTCCG
GCCTCGAAATAGAAATCCGGCGGGAAGAGATGACTGGAATTCAGATTCAGATTTGCTCCGCATTCTGCACAACAATAGATGGAAGCCATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCGATAATCAATATATTTCAACTCTCAGAGGAAATCCGAAGCTCCTTGATCTTGAATCTGTATCTAGGAGCTCGGGGAATAACCTGGCTAGGTCCGAAGTGGTACT
GACCAGGACTATCGTTGACGGTCTCGAAGAATGGCCGGAGCTTGTCCTCTTTCTCGAGCCTGAACTTGGTGGAGTCGATCAAGGAAAACGAAAGCGTGCCCTTGTTTCCG
GCCTCGAAATAGAAATCCGGCGGGAAGAGATGACTGGAATTCAGATTCAGATTTGCTCCGCATTCTGCACAACAATAGATGGAAGCCATTGTTGA
Protein sequenceShow/hide protein sequence
MRDNQYISTLRGNPKLLDLESVSRSSGNNLARSEVVLTRTIVDGLEEWPELVLFLEPELGGVDQGKRKRALVSGLEIEIRREEMTGIQIQICSAFCTTIDGSHC