CuGenDBv2

Gene ID	CmoCh16G013200
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	ganglioside-induced differentiation-associated protein 2-like
Genome location	Cmo_Chr16:9370688..9371789
RNA-Seq Expression	CmoCh16G013200
Synteny	CmoCh16G013200
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0016491 - oxidoreductase activity (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR001251 - CRAL-TRIO lipid binding domain IPR036865 - CRAL-TRIO lipid binding domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004146166.1 ganglioside-induced differentiation-associated protein 2 [Cucumis sativus]

1.4e-60

92.37

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Query:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV
        MAA + PPPPEQN LE LDVFKIKGRDKQGRRILRITGKFFPAR+VSLDV+KKHLEEKIFPRLKNKRFTILYFHT VQRSQNFPGIAALRSIY+AIPA V
Subjt:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV

Query:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE
        KANLEAVYFVHPDLQARLFLATLGRIFFTSE
Subjt:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE

XP_008448498.1 PREDICTED: ganglioside-induced differentiation-associated protein 2 [Cucumis melo]

5.4e-60

91.6

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Query:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV
        MAA + PPPPEQN LE LDVFKIKGRDKQGRRILRITGKFFPAR+VSLDV+KKHLEEKIFPRLKNKRFTILYFH+ VQRSQNFPGIAALRSIY+AIPA V
Subjt:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV

Query:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE
        KANLEAVYFVHPDLQARLFLATLGRIFFTSE
Subjt:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE

XP_022923521.1 ganglioside-induced differentiation-associated protein 2-like [Cucurbita moschata]

8.6e-66

100

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Query:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV
        MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV
Subjt:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV

Query:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE
        KANLEAVYFVHPDLQARLFLATLGRIFFTSE
Subjt:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE

XP_023553442.1 ganglioside-induced differentiation-associated protein 2-like [Cucurbita pepo subsp. pepo]

4.3e-65

99.24

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Query:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV
        MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKI PRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV
Subjt:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV

Query:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE
        KANLEAVYFVHPDLQARLFLATLGRIFFTSE
Subjt:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE

XP_038905989.1 ganglioside-induced differentiation-associated protein 2 [Benincasa hispida]

1.2e-59

91.04

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Query:  MAAQVQ---PPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIP
        MA Q+Q   PPPP+QN LE LDVFKIKGRDKQGRRILRITGKFFPARIVSLDV+KKHLEEKIFPRLKNKRFTILYFHT VQRSQNFPGIAALRSIY+AIP
Subjt:  MAAQVQ---PPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIP

Query:  ATVKANLEAVYFVHPDLQARLFLATLGRIFFTSE
        A VKANLEAVYFVHPDLQARLFLATLGRIFFTSE
Subjt:  ATVKANLEAVYFVHPDLQARLFLATLGRIFFTSE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L0Z7 CRAL-TRIO domain-containing protein

6.9e-61

92.37

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Query:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV
        MAA + PPPPEQN LE LDVFKIKGRDKQGRRILRITGKFFPAR+VSLDV+KKHLEEKIFPRLKNKRFTILYFHT VQRSQNFPGIAALRSIY+AIPA V
Subjt:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV

Query:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE
        KANLEAVYFVHPDLQARLFLATLGRIFFTSE
Subjt:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE

A0A1S3BJ81 ganglioside-induced differentiation-associated protein 2

2.6e-60

91.6

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Query:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV
        MAA + PPPPEQN LE LDVFKIKGRDKQGRRILRITGKFFPAR+VSLDV+KKHLEEKIFPRLKNKRFTILYFH+ VQRSQNFPGIAALRSIY+AIPA V
Subjt:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV

Query:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE
        KANLEAVYFVHPDLQARLFLATLGRIFFTSE
Subjt:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE

A0A6J1E710 ganglioside-induced differentiation-associated protein 2-like

4.2e-66

100

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Query:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV
        MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV
Subjt:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV

Query:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE
        KANLEAVYFVHPDLQARLFLATLGRIFFTSE
Subjt:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE

A0A6J1I6H6 ganglioside-induced differentiation-associated protein 2-like

1.0e-59

90.84

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Query:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV
        M+AQ+QPPPPEQNQLE  DVFKIKGRDKQ RRILRI GKFFPAR VSLDVVK HLEEKIFPRLKNKRFTILYFHT VQRSQNFPGIAALRSIY+AIPA V
Subjt:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV

Query:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE
        KANLEAVYFVHPDLQAR+FLATLGRIFFTSE
Subjt:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE

A0A6J1L134 ganglioside-induced differentiation-associated protein 2-like

4.2e-66

100

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Query:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV
        MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV
Subjt:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV

Query:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE
        KANLEAVYFVHPDLQARLFLATLGRIFFTSE
Subjt:  KANLEAVYFVHPDLQARLFLATLGRIFFTSE

SwissProt top hits

e value

%identity

Alignment

A7T167 Protein GDAP2 homolog

1.2e-04

27.66

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Query:  GRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARL
        G D  GR ++    + F A+   L     +    +  R+ N+ + ++YFHT     +N P ++ L+ +Y  +    + NL+A Y VHP + AR+
Subjt:  GRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARL

Q292F9 Protein GDAP2 homolog

5.9e-09

34.04

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Query:  GRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARL
        G D+ GR ++   GK+FPA+ + L+    +L + + P +K   + I YFHT +  + N+P +  LR +Y  +P   K NL+A Y VHP    ++
Subjt:  GRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARL

Q7JUR6 Protein GDAP2 homolog

5.9e-09

34.04

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Query:  GRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARL
        G D+ GR ++   GK+FPA+ + L+    +L + + P +K   + I YFHT +  + N+P +  LR +Y  +P   K NL+A Y VHP    ++
Subjt:  GRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHPDLQARL

Arabidopsis top hits

e value

%identity

Alignment

AT3G10210.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

4.6e-25

43.59

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Query:  NQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHP
        + L+ L  F ++G D+ G RI RI GK+FPAR+VS + +KK++ +KI  +       ++Y H+ VQ+  N PGI  LR IYE +P+ +K  L+ VYF+HP
Subjt:  NQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFVHP

Query:  DLQARLFLATLGRIFFT
         L++RL +ATLGR+  +
Subjt:  DLQARLFLATLGRIFFT

AT4G35750.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

5.4e-42

64.34

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Query:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV
        M++Q+     EQ  +E L++FKI GRDK+GR+ILRI GKFFPAR +SLDV+KK+LEEKIFPRL  K F +LY HT VQRS+NFPGI+ALR+IY+AIP  V
Subjt:  MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATV

Query:  KANLEAVYFVHPDLQARLFLATLGRIFFT
        + NL+ VYF+HP LQ+RLFLAT GR  F+
Subjt:  KANLEAVYFVHPDLQARLFLATLGRIFFT

Sequences

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CDS sequence

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ATGGCCGCTCAGGTTCAGCCTCCTCCGCCGGAGCAAAACCAACTCGAAAACCTCGACGTCTTCAAGATTAAAGGCAGAGACAAACAAGGCCGCCGGATTCTCCGCATTAC
CGGAAAATTCTTTCCAGCACGGATTGTGAGTTTGGATGTGGTGAAGAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTTC
ACACCGACGTTCAAAGGAGCCAAAATTTCCCCGGAATCGCCGCCCTCCGATCAATCTATGAAGCAATTCCAGCCACCGTCAAGGCTAATCTCGAGGCCGTGTACTTCGTT
CACCCAGACCTCCAGGCCAGGCTCTTCCTCGCCACACTCGGCCGCATTTTCTTCACTAGCGAGTATATTTTCTAA

mRNA sequence

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AATCTTTGCCCCCACGTCCGCGCCATTCGCCTCTTCCGCCCAATGATCTGGAGTCCCTTTTAATCCTCTCCCGATCATCTTTATTTCTTCGTTTATTTTCCAAATCTCAT
CCTCCAATTCCGTTCTCCACCAAAATCCCTTCACTCCCTCCTTATCCCTAACCATTCTCTCAACGCTACTCGCTTTTTCCTTCTGATTCTACTTGGAATTCGTCTCATAT
GGCCGCTCAGGTTCAGCCTCCTCCGCCGGAGCAAAACCAACTCGAAAACCTCGACGTCTTCAAGATTAAAGGCAGAGACAAACAAGGCCGCCGGATTCTCCGCATTACCG
GAAAATTCTTTCCAGCACGGATTGTGAGTTTGGATGTGGTGAAGAAGCATCTGGAGGAGAAGATCTTCCCTAGGCTTAAGAACAAGCGTTTTACGATCTTGTACTTTCAC
ACCGACGTTCAAAGGAGCCAAAATTTCCCCGGAATCGCCGCCCTCCGATCAATCTATGAAGCAATTCCAGCCACCGTCAAGGCTAATCTCGAGGCCGTGTACTTCGTTCA
CCCAGACCTCCAGGCCAGGCTCTTCCTCGCCACACTCGGCCGCATTTTCTTCACTAGCGAGTATATTTTCTAA

Protein sequence

Show/hide protein sequence

MAAQVQPPPPEQNQLENLDVFKIKGRDKQGRRILRITGKFFPARIVSLDVVKKHLEEKIFPRLKNKRFTILYFHTDVQRSQNFPGIAALRSIYEAIPATVKANLEAVYFV
HPDLQARLFLATLGRIFFTSEYIF

CmoCh16G013200 (gene) of Cucurbita moschata (Rifu) v1 genome