; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh16G013460 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh16G013460
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSplicing factor YJU2
Genome locationCmo_Chr16:9489892..9492869
RNA-Seq ExpressionCmoCh16G013460
SyntenyCmoCh16G013460
Gene Ontology termsGO:0000349 - generation of catalytic spliceosome for first transesterification step (biological process)
GO:0071006 - U2-type catalytic step 1 spliceosome (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR007590 - Saf4/Yju2 protein
IPR043701 - Splicing factor Yju2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577830.1 Splicing factor YJU2, partial [Cucurbita argyrosperma subsp. sororia]2.6e-17297.29Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED    TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML ALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
        NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAK   KQKISEEFPHDPTNTSTKAAVL+ALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
Subjt:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT

Query:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED
        ARVENKQSLEVQTSDTNTGLESLCQYYASDED
Subjt:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED

KAG7015867.1 Coiled-coil domain-containing protein 94-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-17498.48Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGA
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGA
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGA

Query:  TRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVFNKSN
        TRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML ALQQTAAEKEKKLEEEDEALIKSIVFNKSN
Subjt:  TRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVFNKSN

Query:  NYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARVE
        NYVRRISDDEFDDNNHFVQHSTNNDETFDFRAK   KQKISEEFPHDPTNTSTKAAVL+ALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARVE
Subjt:  NYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARVE

Query:  NKQSLEVQTSDTNTGLESLCQYYASDED
        NKQSLEVQTSDTNTGLESLCQYYASDED
Subjt:  NKQSLEVQTSDTNTGLESLCQYYASDED

XP_022923549.1 coiled-coil domain-containing protein 94 homolog [Cucurbita moschata]1.4e-17397.89Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED    TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
        NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAK   KQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
Subjt:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT

Query:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED
        ARVENKQSLEVQTSDTNTGLESLCQYYASDED
Subjt:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED

XP_022965295.1 coiled-coil domain-containing protein 94 homolog [Cucurbita maxima]7.0e-17096.08Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED    TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML ALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
        N SNNYVRRISDDEFDDNNHFVQHST+NDETFDFRAK   KQKISEEFPHDPTNTSTKAAVL+AL GEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
Subjt:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT

Query:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED
        ARVENKQSLEVQ SDTNTGLESLCQYYASDED
Subjt:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED

XP_023552633.1 coiled-coil domain-containing protein 94 homolog [Cucurbita pepo subsp. pepo]1.3e-17196.99Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED    TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML ALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
        NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAK   KQKISEEFPHDPTNTSTKAAVL+ALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
Subjt:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT

Query:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED
        ARVENKQSLEVQ SDTNTGLESLCQYYASDED
Subjt:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED

TrEMBL top hitse value%identityAlignment
A0A6J1E3A4 Splicing factor YJU26.3e-14081.93Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+ VRMMLPMSIRCNTCGNYIYKGTKFNSRKED    TYLGIQ+FRFYFKCTRCSAELTIKTDP+NSDY V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWR+EDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML ALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
        N S +YVRRI DDEFDD +HFV   TNND+T    AK   KQK+ EE PHDPT+TSTKA +LN+LT EG+D +VGTS  ++FVSKSL ++VSIIKKPELT
Subjt:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT

Query:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED
          V+N+     QT D NTGL SLCQ Y SDED
Subjt:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED

A0A6J1E6Q8 Splicing factor YJU26.6e-17497.89Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED    TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
        NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAK   KQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
Subjt:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT

Query:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED
        ARVENKQSLEVQTSDTNTGLESLCQYYASDED
Subjt:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED

A0A6J1EW00 Splicing factor YJU21.8e-14282.23Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+ VRMMLPMSIRCNTCGNYIYKGTKFNSRKED    TYLGIQLFRFYFKCTRCSAELTIKTDP+NSDY V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWR+EDE SEKEKHKR+AEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML ALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
        N SNNYV+RISDD+FDD++   Q STNND+T +  AK   KQK+SEE PHD   T+TK A+L++LTGEG DGN  TS  +K +SKSL ++VSIIKKPELT
Subjt:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT

Query:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED
         RVE KQ LEVQ  DTN GLESLCQ Y SDED
Subjt:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED

A0A6J1HNB0 Splicing factor YJU23.4e-17096.08Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED    TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML ALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
        N SNNYVRRISDDEFDDNNHFVQHST+NDETFDFRAK   KQKISEEFPHDPTNTSTKAAVL+AL GEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
Subjt:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT

Query:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED
        ARVENKQSLEVQ SDTNTGLESLCQYYASDED
Subjt:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED

A0A6J1HYT1 Splicing factor YJU23.9e-14282.23Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        MGERKVLNKYYPPDFDPSKLPRVRRPKNQQ+ VRMMLPMSIRCNTCGNYIYKGTKFNSRKED    TYLGIQLFRFYFKCTRCSAELTIKTDP+NSDY V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRNFEPWR+EDE SEKEKHKRNAEEMGD MKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSML ALQQTAAEKEKKLEEEDEALIKSIVF
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT
        N SNNYVRRISDD+FD ++   Q STNND+T +  AK   KQK+SEE PHD   T+ K  +L++LTGEG DGN  TSS +KF+SKSL ++VSIIKKPELT
Subjt:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELT

Query:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED
         RVE KQ LEVQ  DTN GLESLCQ Y S+ED
Subjt:  ARVENKQSLEVQTSDTNTGLESLCQYYASDED

SwissProt top hitse value%identityAlignment
A8WHR3 Splicing factor YJU21.4e-5143.19Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKE----DTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RKE    + YLG+ +FRFY KCTRC AE+T KTDP+N+DY +
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKE----DTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        E GATRNF+  +  +E  +K + +R  EE+ +PMK LENRT DSK EM++L  L E+K +  R A V  + ML   ++    ++++ +EEDE   K ++ 
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHD--PTNTSTKAAVLNALTG--EGSDGNVGTSSVSKFVSKSLPVRVSIIKK
              V+R+ D + ++                  AK   K+ I+++ P D   T+TST +  L++     +  D +VG  SV K    SL VR    KK
Subjt:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHD--PTNTSTKAAVLNALTG--EGSDGNVGTSSVSKFVSKSLPVRVSIIKK

Query:  P
        P
Subjt:  P

Q54WR5 Splicing factor YJU23.0e-5439.35Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKE----DTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        MGERKV++KYYPPDFDPSK+ +++  +     V  MLPMSIRCNTCG YI +GTKFN++KE    + YLGI+++RF+ +C +C+AELTIKTDPKNS+Y  
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKE----DTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        ESGATRN+EPW++ DE       K   EE  D M +LENRTL+SKREM++L AL+E+KS+ SR++ +  + +L    Q    +EK  +EED+ L+KSI  
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFDDNN---HFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKP
        NK+   + +I+D+   +NN   + ++   N+D+  D         K +  F ++  N      ++N      ++ N+ T+S+S  +  +           
Subjt:  NKSNNYVRRISDDEFDDNN---HFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKP

Query:  ELTARVENKQSLEVQTSDTNT---GLESLCQYYASDED
             V NKQ   +  ++ N+      S    Y+ DE+
Subjt:  ELTARVENKQSLEVQTSDTNT---GLESLCQYYASDED

Q9BW85 Splicing factor YJU22.1e-5249.53Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKE----DTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RKE    + YLG+ +FRFY KCTRC AE+T KTDP+N+DYT+
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKE----DTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        E GATRNF+  +  +E  ++ + +R  EE+ +PMK LENRT DSK EM++L  L E+K +  R A V  ++ML   + +  E+ ++ +EEDE    +++ 
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDE
              +   SD E
Subjt:  NKSNNYVRRISDDE

Q9D6J3 Splicing factor YJU22.8e-5249.31Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKE----DTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        M ERKVLNKYYPPDFDPSK+P+++ PK++Q  VR+M P ++RC TCG YIYKG KFN+RKE    + YLG+ +FRFY KCTRC AE+T KTDP+N+DYT+
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKE----DTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        E GATRNF+  +  +E  ++ + +R  EE+ +PMK LENRT DSK EM++L  L E+K +  R A V  ++ML   + +  + +++ EEEDE    +++ 
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFDD
         +   + R + D E +D
Subjt:  NKSNNYVRRISDDEFDD

Q9P7C5 Splicing factor YJU21.3e-4445.33Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQ-----QMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDT---YLGIQLFRFYFKCTRCSAELTIKTDPKNS
        M ERKVLNKY PPD+DPS  P  ++ K Q     ++ VR+M P S+RC+TCG YIYKG KFN+RKE T   Y  I + RFY +CTRC+AE+T  TDPK++
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQ-----QMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDT---YLGIQLFRFYFKCTRCSAELTIKTDPKNS

Query:  DYTVESGATRNFEPWRDE--DEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTA--------AEKEKK
        DY  ESGA+RN+EPW ++   E  E E  +RN     D M+ LE +TLD+KR+M I  ALDE++   +R + V+ID  +  L++ A        ++K K 
Subjt:  DYTVESGATRNFEPWRDE--DEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTA--------AEKEKK

Query:  LEEEDEALIKSIVFNKSNNYVRRIS
         EEE +   KS+  ++    +RR++
Subjt:  LEEEDEALIKSIVFNKSNNYVRRIS

Arabidopsis top hitse value%identityAlignment
AT1G17130.1 Family of unknown function (DUF572)1.3e-9759.94Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        MGERKVLNKYYPPDFDP+KL R+RRPKNQQ+ VRMMLPMS+RC TCGNYIYKGTKFNSRKED    TYLGIQ+FRFYFKCT+CSAELT+KTDP+NSDY V
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        ESGA+RN+EPWR EDE  +K+K KR+AEEMGD MKSLENRTLDSKREMDI+AALDEMKSMKSRHATVS+D+ML ALQ+T AEK K++EEEDEA+IKSI F
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFD---DNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKP
         K    +RRI+D+E D   D++    + +   E     + +S+K+K +E  P +PT+  T ++  N    +         ++SK   KS+ ++V I K+P
Subjt:  NKSNNYVRRISDDEFD---DNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKP

Query:  ELT-------ARVENKQSLEVQTSDTNTGLESLCQYYASDED
        + T       A+ E K+S        NT L SL Q Y SDED
Subjt:  ELT-------ARVENKQSLEVQTSDTNTGLESLCQYYASDED

AT1G17130.2 Family of unknown function (DUF572)8.5e-9758.74Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED-----------TYLGIQLFRFYFKCTRCSAELTIKTDP
        MGERKVLNKYYPPDFDP+KL R+RRPKNQQ+ VRMMLPMS+RC TCGNYIYKGTKFNSRKED           TYLGIQ+FRFYFKCT+CSAELT+KTDP
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED-----------TYLGIQLFRFYFKCTRCSAELTIKTDP

Query:  KNSDYTVESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEA
        +NSDY VESGA+RN+EPWR EDE  +K+K KR+AEEMGD MKSLENRTLDSKREMDI+AALDEMKSMKSRHATVS+D+ML ALQ+T AEK K++EEEDEA
Subjt:  KNSDYTVESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEA

Query:  LIKSIVFNKSNNYVRRISDDEFD---DNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVR
        +IKSI F K    +RRI+D+E D   D++    + +   E     + +S+K+K +E  P +PT+  T ++  N    +         ++SK   KS+ ++
Subjt:  LIKSIVFNKSNNYVRRISDDEFD---DNNHFVQHSTNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVR

Query:  VSIIKKPELT-------ARVENKQSLEVQTSDTNTGLESLCQYYASDED
        V I K+P+ T       A+ E K+S        NT L SL Q Y SDED
Subjt:  VSIIKKPELT-------ARVENKQSLEVQTSDTNTGLESLCQYYASDED

AT2G29430.1 Family of unknown function (DUF572)1.3e-1753.16Show/hide
Query:  NVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEP
        N  + LPM ++CN C N + KGTKF SR ED    TYLGI++FRF  +CT  S E+  +TDPKN+D+ +ESGATR   P
Subjt:  NVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEP

AT2G32050.1 Family of unknown function (DUF572)1.1e-5956.22Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKE----DTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        MGERK LNKYYPP+FDP ++PR+R+PKNQQ  +R M+P+ IRCNTCGNY+ +GTK N R+E    +TYLGI++ RFYFKC++C  EL +KTDPKNS Y  
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKE----DTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        ESGAT  ++   +E++          AE+ GD M SLE RTL SKRE+D++AALDEMKSMKSR  +VS+DSML  L +   E+E+  +EED ALIKS  F
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFDD
         K     RRI D+E D+
Subjt:  NKSNNYVRRISDDEFDD

AT3G43250.1 Family of unknown function (DUF572)2.5e-5652.26Show/hide
Query:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV
        MGERK LNKYYPPDFDP K+ R+++PKNQQ  +R MLP+ +RCNTCGNY+ +GTKFN R+ED    TYLG+++ RFY KCT+C AELTIKTDPKN  YTV
Subjt:  MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKED----TYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTV

Query:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF
        ESGA+  +    D +E  EK+K   NA      ++SLENRT+ SKRE++++A+LDE+KSMKSR A++S+D ML  L +   ++E+ +EE  E LIKSI F
Subjt:  ESGATRNFEPWRDEDEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVF

Query:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQK
         K      RI  DE    N+         E FD + K  +K K
Subjt:  NKSNNYVRRISDDEFDDNNHFVQHSTNNDETFDFRAKVSEKQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGAGGAAGGTGCTCAACAAATACTATCCACCGGATTTTGATCCATCAAAACTACCAAGGGTTCGTAGGCCCAAAAACCAACAAATGAACGTCCGTATGATGCT
TCCTATGAGTATCCGGTGCAATACTTGTGGTAATTACATATACAAGGGCACCAAGTTTAATTCCCGCAAGGAGGACACATATTTGGGAATCCAATTGTTTAGATTCTACT
TCAAATGTACTCGATGTTCGGCTGAGCTCACCATCAAAACAGACCCCAAAAATTCAGATTATACTGTAGAATCTGGTGCCACTCGTAATTTTGAACCATGGCGTGATGAA
GATGAAGCTTCAGAGAAGGAGAAACACAAAAGGAATGCTGAAGAGATGGGGGACCCAATGAAATCCTTGGAGAATAGAACCTTGGATTCTAAGCGCGAAATGGACATCCT
TGCTGCTTTGGATGAGATGAAATCTATGAAGTCCAGACATGCAACTGTGAGTATTGATTCAATGCTTACGGCTTTGCAACAAACTGCTGCCGAAAAGGAAAAGAAGTTAG
AGGAAGAGGATGAGGCATTGATAAAATCAATTGTCTTCAATAAATCAAACAATTATGTTAGAAGAATTTCGGACGATGAATTTGATGATAACAATCATTTTGTACAACAT
TCGACCAACAATGATGAAACATTTGACTTTCGTGCAAAGGTAAGTGAAAAGCAAAAGATTTCTGAAGAATTTCCTCATGACCCTACCAATACTTCAACGAAAGCTGCTGT
TCTCAATGCCCTCACGGGTGAAGGAAGCGATGGCAACGTTGGCACCTCTAGTGTTTCGAAGTTTGTTTCTAAATCTTTGCCAGTTAGGGTTTCTATTATAAAGAAACCAG
AATTGACTGCTCGGGTGGAGAATAAACAGAGCTTGGAAGTTCAAACCAGTGATACGAACACTGGACTCGAGTCCTTGTGCCAATACTATGCCAGTGATGAGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAGAGGAAGGTGCTCAACAAATACTATCCACCGGATTTTGATCCATCAAAACTACCAAGGGTTCGTAGGCCCAAAAACCAACAAATGAACGTCCGTATGATGCT
TCCTATGAGTATCCGGTGCAATACTTGTGGTAATTACATATACAAGGGCACCAAGTTTAATTCCCGCAAGGAGGACACATATTTGGGAATCCAATTGTTTAGATTCTACT
TCAAATGTACTCGATGTTCGGCTGAGCTCACCATCAAAACAGACCCCAAAAATTCAGATTATACTGTAGAATCTGGTGCCACTCGTAATTTTGAACCATGGCGTGATGAA
GATGAAGCTTCAGAGAAGGAGAAACACAAAAGGAATGCTGAAGAGATGGGGGACCCAATGAAATCCTTGGAGAATAGAACCTTGGATTCTAAGCGCGAAATGGACATCCT
TGCTGCTTTGGATGAGATGAAATCTATGAAGTCCAGACATGCAACTGTGAGTATTGATTCAATGCTTACGGCTTTGCAACAAACTGCTGCCGAAAAGGAAAAGAAGTTAG
AGGAAGAGGATGAGGCATTGATAAAATCAATTGTCTTCAATAAATCAAACAATTATGTTAGAAGAATTTCGGACGATGAATTTGATGATAACAATCATTTTGTACAACAT
TCGACCAACAATGATGAAACATTTGACTTTCGTGCAAAGGTAAGTGAAAAGCAAAAGATTTCTGAAGAATTTCCTCATGACCCTACCAATACTTCAACGAAAGCTGCTGT
TCTCAATGCCCTCACGGGTGAAGGAAGCGATGGCAACGTTGGCACCTCTAGTGTTTCGAAGTTTGTTTCTAAATCTTTGCCAGTTAGGGTTTCTATTATAAAGAAACCAG
AATTGACTGCTCGGGTGGAGAATAAACAGAGCTTGGAAGTTCAAACCAGTGATACGAACACTGGACTCGAGTCCTTGTGCCAATACTATGCCAGTGATGAGGACTGA
Protein sequenceShow/hide protein sequence
MGERKVLNKYYPPDFDPSKLPRVRRPKNQQMNVRMMLPMSIRCNTCGNYIYKGTKFNSRKEDTYLGIQLFRFYFKCTRCSAELTIKTDPKNSDYTVESGATRNFEPWRDE
DEASEKEKHKRNAEEMGDPMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSIDSMLTALQQTAAEKEKKLEEEDEALIKSIVFNKSNNYVRRISDDEFDDNNHFVQH
STNNDETFDFRAKVSEKQKISEEFPHDPTNTSTKAAVLNALTGEGSDGNVGTSSVSKFVSKSLPVRVSIIKKPELTARVENKQSLEVQTSDTNTGLESLCQYYASDED