| GenBank top hits | e value | %identity | Alignment |
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| ABA94350.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] | 5.1e-80 | 57.72 | Show/hide |
Query: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
MT +RSAF+ELD+ + GTV+FGDGSV+ IEGRGT+LF + GEHR + VY+IPRL AN++SLGQLD +G + I G+L++ D + LL + R + + L
Subjt: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
Query: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Y ++L+ID+PV L+A++ +WRWHARYGHLNF AL KL ++E+V GLP ++ V ++CDGCL+GKQRR FP+++ YRADE LELVHGD+CGPI+PATP
Subjt: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Query: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
G FLLLVDD SR+MWLTL+++K EAA A+K +ARAE E +K+
Subjt: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
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| BAF23632.1 Os08g0389500 [Oryza sativa Japonica Group] | 6.0e-81 | 61.79 | Show/hide |
Query: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
MT RSAFSEL++GIRGTVKFGDGSV+ IEGRGT+LF K GEH+ L VY IPRL N++SLGQLDE S E G+LKI + QRRLL + R+ NRL
Subjt: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
Query: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Y+++L I +PV L+A+ ++WRWHAR+GHLNF ALEKL + +V GLP I V+++CD CL+GKQRR PFPS+ YRA E LELVHGDICGP+ PATP
Subjt: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Query: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
G LFLLLVDD SR+MWL LL +K +A+ A+KR A AEAE +K+
Subjt: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
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| CAE03692.2 OSJNBb0026E15.10 [Oryza sativa Japonica Group] | 6.6e-80 | 57.32 | Show/hide |
Query: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
MT +RSAF+ELD+ + GTV+FGDGSV+ IEGR T+LF + GEHR + VY+IPRL AN++SLGQLD +G + I G+L + D + LL + RR+ + L
Subjt: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
Query: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Y ++L+ID+PV L+A++ +WRWHARYGHLNF AL KL ++E+V GLP ++ V ++CDGCL+GKQRR FP+++ YRADE LELVHGD+CGPI+PATP
Subjt: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Query: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
G FLLLVDD SR+MWLT++++K EAA A+K +ARAE E +K+
Subjt: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
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| KAF8725661.1 hypothetical protein HU200_020204 [Digitaria exilis] | 2.9e-83 | 61.79 | Show/hide |
Query: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
MT ARSAF+ELDSGIRGTV+FGDGS + IEGRGT+LF K GEH+KLT VY IPRL AN++SLGQL+E G I + +G LKI D + RL+ + R +RL
Subjt: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
Query: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
YIL++ +D+PV L+A TE +WRWHARYGHL F L+KL K E+V GLP I VN++CDGCL+GKQRR PFP+ + +RA + LELVH D+CGPI PATPG
Subjt: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Query: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
GK +FLL VDD SR+MWL LL TK E++ A+ R++A AE E E+K+
Subjt: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
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| KAG8082074.1 hypothetical protein GUJ93_ZPchr0014g47192 [Zizania palustris] | 5.1e-80 | 58.54 | Show/hide |
Query: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
MT S FSE+D+G+RGTV+FGDGSV++IEGRGTI+F K GEH++L VY+IP+L AN++SLGQLDE G I +E+ +L+I D +RRLL + R+ RL
Subjt: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
Query: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Y+L L ID+PV L+A++ +W+WHAR+GHL F L+++ K+++V GLP I V++LCD CL GKQRR FP+ + YRA PLELVH DICGPI P TPG
Subjt: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Query: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
GK LFLLLVDDKSR+MWL LL KS+A++A+ R++AR E E +KM
Subjt: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0B9X7 OSIGBa0135C09.3 protein | 5.5e-80 | 56.91 | Show/hide |
Query: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
MT +RSAF++LD+ + GTV+FGDGSV+ IEGRGT+LF + GEHR + VY+IPRL AN++SLGQLD +G + I G+L++ D + LL + RR+ + L
Subjt: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
Query: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Y ++L ID+PV L+A++ +WRWHARYGHLNF +L KL ++E+V GLP ++ V ++CDGCL+GKQRR FP+++ YRADE LELVHGD+CGPI+PATP
Subjt: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Query: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
G FLLLVDD SR+MWLTL+++K EAA A+K +A AE E +K+
Subjt: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
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| Q0J5Y3 Os08g0389500 protein | 2.9e-81 | 61.79 | Show/hide |
Query: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
MT RSAFSEL++GIRGTVKFGDGSV+ IEGRGT+LF K GEH+ L VY IPRL N++SLGQLDE S E G+LKI + QRRLL + R+ NRL
Subjt: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
Query: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Y+++L I +PV L+A+ ++WRWHAR+GHLNF ALEKL + +V GLP I V+++CD CL+GKQRR PFPS+ YRA E LELVHGDICGP+ PATP
Subjt: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Query: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
G LFLLLVDD SR+MWL LL +K +A+ A+KR A AEAE +K+
Subjt: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
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| Q2R2J6 Retrotransposon protein, putative, Ty1-copia subclass | 2.5e-80 | 57.72 | Show/hide |
Query: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
MT +RSAF+ELD+ + GTV+FGDGSV+ IEGRGT+LF + GEHR + VY+IPRL AN++SLGQLD +G + I G+L++ D + LL + R + + L
Subjt: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
Query: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Y ++L+ID+PV L+A++ +WRWHARYGHLNF AL KL ++E+V GLP ++ V ++CDGCL+GKQRR FP+++ YRADE LELVHGD+CGPI+PATP
Subjt: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Query: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
G FLLLVDD SR+MWLTL+++K EAA A+K +ARAE E +K+
Subjt: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
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| Q7XPB1 OSJNBb0026E15.10 protein | 3.2e-80 | 57.32 | Show/hide |
Query: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
MT +RSAF+ELD+ + GTV+FGDGSV+ IEGR T+LF + GEHR + VY+IPRL AN++SLGQLD +G + I G+L + D + LL + RR+ + L
Subjt: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
Query: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Y ++L+ID+PV L+A++ +WRWHARYGHLNF AL KL ++E+V GLP ++ V ++CDGCL+GKQRR FP+++ YRADE LELVHGD+CGPI+PATP
Subjt: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Query: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
G FLLLVDD SR+MWLT++++K EAA A+K +ARAE E +K+
Subjt: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
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| Q7XUD9 OSJNBa0088A01.6 protein | 9.3e-80 | 58.94 | Show/hide |
Query: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
MT R F+ELD +RG+V+FGDGSV+ IEGRG I+F + EHR LT VY+IP+L ANL+SLGQLDE GC + I G+ I D +LL + +RT NRL
Subjt: MTEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRL
Query: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Y+++L I QPV L+AK + +W WHARYGHL+F AL +L +++V G+P I V +LCD C+I KQRRTPFP R+ +RA++ LELVHGD+CGPI PATPG
Subjt: YILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVNKLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Query: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
GK+ FLLL DD SR+MW+TLL KSEAA+A+KR +ARAEAE ++K+
Subjt: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.0e-18 | 26.84 | Show/hide |
Query: IEIEGRGTILFVSKGG------EHR-KLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEV
I + +G ++ +K G +H L DV F NLMS+ +L E G I ++ + I N ++ + N + + Q S++AK +
Subjt: IEIEGRGTILFVSKGG------EHR-KLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLYILELEIDQPVSLSAKTEV
Query: VSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVN---KLCDGCLIGKQRRTPFPS-RTSYRADEPLELVHGDICGPIKPATPGGKSLFLLLVDDKSRF
WH R+GH++ L ++++K + + + ++C+ CL GKQ R PF + PL +VH D+CGPI P T K+ F++ VD + +
Subjt: VSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVN---KLCDGCLIGKQRRTPFPS-RTSYRADEPLELVHGDICGPIKPATPGGKSLFLLLVDDKSRF
Query: MWLTLLQTKSEAAEAVKRIKARAEAECEKKM
L++ KS+ + A++EA K+
Subjt: MWLTLLQTKSEAAEAVKRIKARAEAECEKKM
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-25 | 32.93 | Show/hide |
Query: TEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLY
T R F +G GTVK G+ S +I G G I + G L DV +P L+ NL+S LD G ++ + R T LY
Subjt: TEARSAFSELDSGIRGTVKFGDGSVIEIEGRGTILFVSKGGEHRKLTDVYFIPRLKANLMSLGQLDETGCFISIERGLLKICDNQRRLLTQARRTTNRLY
Query: ILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVN-KLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
EI Q +A+ E+ WH R GH++ L+ L KK L+ KG K CD CL GKQ R F + +S R L+LV+ D+CGP++ + G
Subjt: ILELEIDQPVSLSAKTEVVSWRWHARYGHLNFSALEKLQKKELVHGLPAIKGVN-KLCDGCLIGKQRRTPFPSRTSYRADEPLELVHGDICGPIKPATPG
Query: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
G F+ +DD SR +W+ +L+TK + + ++ A E E +K+
Subjt: GKSLFLLLVDDKSRFMWLTLLQTKSEAAEAVKRIKARAEAECEKKM
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| P25384 Transposon Ty2-C Gag-Pol polyprotein | 3.2e-08 | 34.55 | Show/hide |
Query: HARYGHLNFSALEKLQKKELVHGLPA--IKGVNK---LCDGCLIGK--QRRTPFPSRTSYRAD-EPLELVHGDICGPIKPATPGGKSLFLLLVDDKSRFM
H GH NF +++K KK V L I+ N C CLIGK + R SR Y+ EP + +H DI GP+ S F+ D+K+RF
Subjt: HARYGHLNFSALEKLQKKELVHGLPA--IKGVNK---LCDGCLIGK--QRRTPFPSRTSYRAD-EPLELVHGDICGPIKPATPGGKSLFLLLVDDKSRFM
Query: WLTLLQTKSE
W+ L + E
Subjt: WLTLLQTKSE
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| Q12472 Transposon Ty2-DR1 Gag-Pol polyprotein | 3.2e-08 | 34.55 | Show/hide |
Query: HARYGHLNFSALEKLQKKELVHGLPA--IKGVNK---LCDGCLIGK--QRRTPFPSRTSYRAD-EPLELVHGDICGPIKPATPGGKSLFLLLVDDKSRFM
H GH NF +++K KK V L I+ N C CLIGK + R SR Y+ EP + +H DI GP+ S F+ D+K+RF
Subjt: HARYGHLNFSALEKLQKKELVHGLPA--IKGVNK---LCDGCLIGK--QRRTPFPSRTSYRAD-EPLELVHGDICGPIKPATPGGKSLFLLLVDDKSRFM
Query: WLTLLQTKSE
W+ L + E
Subjt: WLTLLQTKSE
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 3.2e-08 | 34.55 | Show/hide |
Query: HARYGHLNFSALEKLQKKELVHGLPA--IKGVNK---LCDGCLIGK--QRRTPFPSRTSYRAD-EPLELVHGDICGPIKPATPGGKSLFLLLVDDKSRFM
H GH NF +++K KK V L I+ N C CLIGK + R SR Y+ EP + +H DI GP+ S F+ D+K+RF
Subjt: HARYGHLNFSALEKLQKKELVHGLPA--IKGVNK---LCDGCLIGK--QRRTPFPSRTSYRAD-EPLELVHGDICGPIKPATPGGKSLFLLLVDDKSRFM
Query: WLTLLQTKSE
W+ L + E
Subjt: WLTLLQTKSE
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