CuGenDBv2

Gene ID	CmoCh17G000690
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Ferredoxin-like protein
Genome location	Cmo_Chr17:361738..363774
RNA-Seq Expression	CmoCh17G000690
Synteny	CmoCh17G000690
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR035940 - CAP superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7013402.1 hypothetical protein SDJN02_23568, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.2e-109

97.49

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Query:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF
        MRNLC VECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNN VNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN
        DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSR   N
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN

XP_022958984.1 uncharacterized protein LOC111460112 [Cucurbita moschata]

5.6e-110

98.49

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Query:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF
        MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN
        DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSR   N
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN

XP_023006308.1 uncharacterized protein LOC111499082 [Cucurbita maxima]

3.8e-106

94.97

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Query:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF
        MRNLCIVECFLLCSSLFAVLV+SK+HGNPANDLVDIINKNRTAAKLSRLSD+AGLGCMALQFINFCKGNCTSNN VNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN
        DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRN+SHTEVGVGMVGV+KGPFFWCVLFSNGKTNS+FVLENHGLGIKQKRGCFSGSSVECSR   N
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN

XP_023549079.1 uncharacterized protein LOC111807547 [Cucurbita pepo subsp. pepo]

5.8e-107

95.98

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Query:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF
        MRNLC VECFLLCS LFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNC+SNN VNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN
        DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGS VECSR   N
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN

XP_038875229.1 uncharacterized protein LOC120067738 [Benincasa hispida]

2.3e-103

91.46

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Query:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF
        MR LC  ECF+LCS LFAVLVSSK+HGNPANDLVDIIN+NRTAAKLS LSD+AGLGCMALQF+NFCKGNCTSNN VNCNPSSDNFTE+FAPDCGVELPTF
Subjt:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN
        DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFS+GKTNSTFVLENHGLGIKQKRGCFSGSSVEC+R   N
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KD29 Uncharacterized protein

3.1e-98

88.72

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Query:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF
        MR LC  ECF+LCS L AVLVSSK+HGNPANDLVDIIN+NRTAAK+S LSD+AGLGCMALQF+NFCKGNCTSNN VNCNPSSDNFTE+FAPDCGVELPTF
Subjt:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSR
        DTITGQIVACQ  YLEPTEAFSRALV DKKTLSL++NKSHTEVGVG+VGVHKGPFFWCVLFS+GKTNSTFVLENHGLGIKQKRGCFSG SVECSR
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSR

A0A1S3CB60 uncharacterized protein LOC103498980

1.0e-101

92.31

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Query:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF
        MR LCI ECF+LCS LFAVLVSSK+HGNPANDLVDIIN+NRTAAKLS LSD+AGLGCMALQFINFCKGNCTSNN VNCNPSSDNFTE+FAPDCGVELPTF
Subjt:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSR
        DTITGQIVACQ  YLEPTEAFSRALVPDKKTLSLL+NKSHTEVGVG+VGVHKGPFFWCVLFS+GKTNSTFVLENHGLGIKQKRGCFSGSSVECSR
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSR

A0A6J1H6P2 uncharacterized protein LOC111460112

2.7e-110

98.49

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Query:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF
        MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN
        DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSR   N
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN

A0A6J1HIR8 uncharacterized protein LOC111464418 isoform X1

3.1e-98

87.94

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Query:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF
        M+ LC++ CF  CS L AVLVSSKYHGNPANDLVDIIN+NRTAAKLSRLSD+AGLGC+ALQF NFCKGNCTSNN VNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN
        DTIT  IVACQP YLEPTEAFSRAL+PDKKTLSLL NKSHTEVGVGMVGVHKGPF WCVLFS+GKTNSTFVLENHGLGIKQKRGCFSGSSVECSR   N
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN

A0A6J1L4J5 uncharacterized protein LOC111499082

1.8e-106

94.97

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Query:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF
        MRNLCIVECFLLCSSLFAVLV+SK+HGNPANDLVDIINKNRTAAKLSRLSD+AGLGCMALQFINFCKGNCTSNN VNCNPSSDNFTEVFAPDCGVELPTF
Subjt:  MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTF

Query:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN
        DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRN+SHTEVGVGMVGV+KGPFFWCVLFSNGKTNS+FVLENHGLGIKQKRGCFSGSSVECSR   N
Subjt:  DTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G02180.1 ferredoxin-related

3.2e-63

57.95

Show/hide

Query:  MRN-LCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPT
        M+N + I+E  LL  SL +VL SSK HGN A+++V I+N+NRTA KL +L+++ GLGCMALQ++  C+GNC  NN ++C    D+FT+VFAP+CGVELPT
Subjt:  MRN-LCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPT

Query:  FDTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECS
        F TITG I+ C   Y  P  AFS  L  D   LS+LRN+SHTEVGVGM  +HKG FFWC+LFS+G  NS+FVLE++G GIKQ+ GC+SGS+  CS
Subjt:  FDTITGQIVACQPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGGAACCTCTGTATCGTTGAATGCTTCCTTCTCTGTTCTTCCCTGTTCGCTGTTCTTGTTTCCTCCAAGTATCACGGAAACCCAGCAAATGATCTTGTTGATATCAT
CAACAAAAACCGAACAGCTGCGAAGCTCTCTCGCCTGAGTGACAATGCAGGTCTCGGGTGCATGGCGTTGCAATTCATCAACTTCTGCAAAGGAAACTGCACTAGCAACA
ACAATGTAAATTGCAATCCATCCTCCGACAACTTCACAGAAGTTTTCGCTCCAGATTGCGGTGTCGAGCTCCCAACTTTCGACACGATAACCGGCCAAATTGTGGCTTGT
CAACCTGGATATCTTGAGCCAACAGAGGCGTTCTCTCGAGCACTCGTTCCTGACAAGAAAACTCTTTCCCTGTTGAGGAACAAATCTCATACAGAGGTTGGTGTGGGGAT
GGTTGGGGTACATAAAGGGCCATTCTTCTGGTGTGTTTTGTTCAGTAATGGGAAGACAAACTCAACATTTGTTCTTGAAAATCATGGTTTGGGTATCAAGCAAAAGAGAG
GATGCTTCAGTGGAAGTAGTGTTGAATGCAGTAGAGAAAAGCCTAACCACATCAGACTAGAGTGCAGCAGCAATAGCAGCACTTTGATGGGGTATTCTTGTGCTTCGAAA
AGAAGCGGGAACAAGGAATAG

mRNA sequence

Show/hide mRNA sequence

ACCCATGAGTGTGCCCACTCCAAAATCCCCTTTTCTCATCCCAATCCCATTCTTTAAGAACCAAAACGGCTAAATGGGGCCATCCCTTTCTTGTCCTGTCTCACAATCTC
TGCAACAATTTGATCAATTTTTCGCGGAAAATCTCCCACTCCCCGTTACACCCTTTCCCCAATTAGGGTTTCTTTTTCTTTCCCACTTCCATTTCTCTTTCTTCTTCTCC
TTTTGGCCTTTTGATCTTCTTTCGTTCTTTGTACAATCATTGTTTGTGGTATAATGAGGAACCTCTGTATCGTTGAATGCTTCCTTCTCTGTTCTTCCCTGTTCGCTGTT
CTTGTTTCCTCCAAGTATCACGGAAACCCAGCAAATGATCTTGTTGATATCATCAACAAAAACCGAACAGCTGCGAAGCTCTCTCGCCTGAGTGACAATGCAGGTCTCGG
GTGCATGGCGTTGCAATTCATCAACTTCTGCAAAGGAAACTGCACTAGCAACAACAATGTAAATTGCAATCCATCCTCCGACAACTTCACAGAAGTTTTCGCTCCAGATT
GCGGTGTCGAGCTCCCAACTTTCGACACGATAACCGGCCAAATTGTGGCTTGTCAACCTGGATATCTTGAGCCAACAGAGGCGTTCTCTCGAGCACTCGTTCCTGACAAG
AAAACTCTTTCCCTGTTGAGGAACAAATCTCATACAGAGGTTGGTGTGGGGATGGTTGGGGTACATAAAGGGCCATTCTTCTGGTGTGTTTTGTTCAGTAATGGGAAGAC
AAACTCAACATTTGTTCTTGAAAATCATGGTTTGGGTATCAAGCAAAAGAGAGGATGCTTCAGTGGAAGTAGTGTTGAATGCAGTAGAGAAAAGCCTAACCACATCAGAC
TAGAGTGCAGCAGCAATAGCAGCACTTTGATGGGGTATTCTTGTGCTTCGAAAAGAAGCGGGAACAAGGAATAG

Protein sequence

Show/hide protein sequence

MRNLCIVECFLLCSSLFAVLVSSKYHGNPANDLVDIINKNRTAAKLSRLSDNAGLGCMALQFINFCKGNCTSNNNVNCNPSSDNFTEVFAPDCGVELPTFDTITGQIVAC
QPGYLEPTEAFSRALVPDKKTLSLLRNKSHTEVGVGMVGVHKGPFFWCVLFSNGKTNSTFVLENHGLGIKQKRGCFSGSSVECSREKPNHIRLECSSNSSTLMGYSCASK
RSGNKE

CmoCh17G000690 (gene) of Cucurbita moschata (Rifu) v1 genome