; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G001070 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G001070
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr17:575869..579272
RNA-Seq ExpressionCmoCh17G001070
SyntenyCmoCh17G001070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3480421.1 hypothetical protein EPI10_020850 [Gossypium australe]1.0e-1451.85Show/hide
Query:  LFPTKIRPAVLRPPEKYSVQASVGHIIINNEQLVFMNTPTTEPDKIPVSEMGNRHQLRHKRLLKLLPFFSQTFHSRHSSIT
        +F ++  P +L P ++YSV+AS+ H++I+ EQLVFMN P  +P+KI V+EM +RHQL  K L K LPF  QTF   HSS+T
Subjt:  LFPTKIRPAVLRPPEKYSVQASVGHIIINNEQLVFMNTPTTEPDKIPVSEMGNRHQLRHKRLLKLLPFFSQTFHSRHSSIT

KAF3785055.1 hypothetical protein EJ110_NYTH28068 [Nymphaea thermarum]3.7e-1225.66Show/hide
Query:  EETQMDQTLHFN-QIIRPIWQPVIAAEQRHSIVGELSKPIKQHNLIIRTCKVHCSPTRDHLKKNNTKAENIGFCSGNASSLKTLRWEIPNCAANFGGFHQ
        E +++   LH    I+ P  QP+I   ++ S       P  Q++ I R  ++   P+  HLK+   ++E++G      S  + LR  +P CA   G    
Subjt:  EETQMDQTLHFN-QIIRPIWQPVIAAEQRHSIVGELSKPIKQHNLIIRTCKVHCSPTRDHLKKNNTKAENIGFCSGNASSLKTLRWEIPNCAANFGGFHQ

Query:  PELVVAHRRHAVLVLKIMLQPPCQTKITKLSVIEQSSSQASHNLHSLFPTKIRPAVLRPPEKYSVQASVGHIIINNEQLVFMNTPTTEPDKIPVSEMGNR
          +++   +  V  L +  Q   Q  + +L  I ++ S +  NL    P ++ P  +   E+  ++AS+ H +I+ EQLV    PT + +++PV +    
Subjt:  PELVVAHRRHAVLVLKIMLQPPCQTKITKLSVIEQSSSQASHNLHSLFPTKIRPAVLRPPEKYSVQASVGHIIINNEQLVFMNTPTTEPDKIPVSEMGNR

Query:  HQLRHKRLLKLLPFFSQTFHSRHSSITRQICSVNLPKSTTTKNFLCTESFGSNIELCKAEDSWVV
          LR K L  LL            ++  Q   VN  K++  +  L TE+ G  ++L   +  WVV
Subjt:  HQLRHKRLLKLLPFFSQTFHSRHSSITRQICSVNLPKSTTTKNFLCTESFGSNIELCKAEDSWVV

KAG6541226.1 hypothetical protein Mapa_017387 [Marchantia paleacea]1.4e-0623.44Show/hide
Query:  EETQMDQTLHFNQIIRPIWQPVIAAEQRHSIVGELSKPIKQHNLIIRTCKVHCSPTRDHLKKNNTKAENIGFCSGNASSLKTLRWEIPNCAANFGGFHQP
        ++ + +   HF  ++R +   V  A+Q  ++V     P+ +  L++R   V   P+   L+ ++++  +I    G  +   +L   +       GG H  
Subjt:  EETQMDQTLHFNQIIRPIWQPVIAAEQRHSIVGELSKPIKQHNLIIRTCKVHCSPTRDHLKKNNTKAENIGFCSGNASSLKTLRWEIPNCAANFGGFHQP

Query:  ELVVAHRRHAVLVLKIMLQPPCQTKITKLSV------------IEQSSSQASHN-------LHSLFPTKIRPAVLRPPEKYSVQASVGHIIINNEQLVFM
        E+V+  R   V  L+I      Q  +  L V            I QS SQ++++        H L P  IR   LR  E+ S+Q  VGH +++ +QL  +
Subjt:  ELVVAHRRHAVLVLKIMLQPPCQTKITKLSV------------IEQSSSQASHN-------LHSLFPTKIRPAVLRPPEKYSVQASVGHIIINNEQLVFM

Query:  NTPTTEPDKIPVSEMGNRHQLRHKRLLKLLPFFSQTFHSRHSSITRQICSVNLPKSTTTKNFLCTESFGSNIE
          P  +   +PV  + +   LRH+    L     Q    + ++I R + SV+  ++   +  +  ES G  +E
Subjt:  NTPTTEPDKIPVSEMGNRHQLRHKRLLKLLPFFSQTFHSRHSSITRQICSVNLPKSTTTKNFLCTESFGSNIE

TrEMBL top hitse value%identityAlignment
A0A0A0LNC9 Uncharacterized protein9.1e-4975.19Show/hide
Query:  MNTPTTEPDKIPVSEMGNRHQLRHKRLLKLLPFFSQTFHSRHSSITRQICSVNLPKSTTTKNFLCTESFGSNIELCKAEDSWVVAAEFLRKVYPIGVVKL
        MNTPTT+P+KIP+SEM +RHQLRHKRLLKLLPFFSQTFHS HSSITRQICSVNLPKST T+NFLCT+SFG  IELCK EDS VV ++FLRK+YP+ VVK+
Subjt:  MNTPTTEPDKIPVSEMGNRHQLRHKRLLKLLPFFSQTFHSRHSSITRQICSVNLPKSTTTKNFLCTESFGSNIELCKAEDSWVVAAEFLRKVYPIGVVKL

Query:  GRWWVSGSAAVATRINPFQVMDFVKGISE
          W  SG+ AVATR+NPFQ ++F +GISE
Subjt:  GRWWVSGSAAVATRINPFQVMDFVKGISE

A0A5B6WF32 Uncharacterized protein5.0e-1551.85Show/hide
Query:  LFPTKIRPAVLRPPEKYSVQASVGHIIINNEQLVFMNTPTTEPDKIPVSEMGNRHQLRHKRLLKLLPFFSQTFHSRHSSIT
        +F ++  P +L P ++YSV+AS+ H++I+ EQLVFMN P  +P+KI V+EM +RHQL  K L K LPF  QTF   HSS+T
Subjt:  LFPTKIRPAVLRPPEKYSVQASVGHIIINNEQLVFMNTPTTEPDKIPVSEMGNRHQLRHKRLLKLLPFFSQTFHSRHSSIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGATTCTCCCTCTTTCCTGCTGCCAATCGCTGTTGAAGATTCACGGGGTGGCAGATTTGTGTTCTACTTCCACTTTCTGAGGGCTTTGGAGTGTACAGAGGAGAC
CCAAATGGATCAAACGCTCCATTTCAATCAGATTATAAGACCCATCTGGCAGCCGGTTATCGCCGCCGAGCAGCGGCATTCCATCGTCGGAGAGCTTTCGAAACCAATCA
AGCAACACAATCTGATCATCAGGACATGTAAGGTCCACTGCTCGCCGACCAGAGACCATCTCAAGAAGAACAATACCAAAGCTGAAAACATCGGATTTTGCAGTGGCAAT
GCTTCTTCTTTGAAAACTCTCCGGTGGGAGATACCCAATTGTGCCGCCAATTTTGGTGGTTTCCACCAGCCGGAACTGGTGGTGGCTCATCGACGGCACGCTGTTTTGGT
ACTCAAGATCATGCTCCAACCACCTTGCCAAACCAAAATCACCAAGCTTAGCGTTATAGAACAGAGCAGCAGCCAAGCCTCTCACAATCTTCACTCTCTGTTTCCAACTA
AGATCCGTCCCGCCGTTCTCCGGCCGCCGGAAAAGTACTCTGTCCAAGCTTCGGTTGGGCATATAATCATAAACAATGAACAATTGGTCTTCATGAACACACCAACCACG
GAGCCGGACAAGATTCCGGTGTCGGAGATGGGCAACCGCCACCAGCTCCGCCACAAACGTCTTCTCAAACTTCTCCCCTTTTTCAGCCAAACATTTCACAGCCGCCATAG
TTCCATCACTAGGCAAATATGCTCTGTAAACCTTCCCAAATCCACCACTACCAAGAATTTCCTCTGCACTGAATCCTTTGGTTCCAATATAGAGCTCTGCAAAGCTGAAG
ATTCTTGGGTTGTCGCCGCCGAGTTTCTCAGAAAGGTGTACCCCATCGGTGTCGTGAAACTCGGACGGTGGTGGGTTTCTGGGTCTGCCGCCGTAGCAACAAGAATTAAC
CCATTTCAGGTTATGGATTTTGTGAAGGGAATCTCGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGATTCTCCCTCTTTCCTGCTGCCAATCGCTGTTGAAGATTCACGGGGTGGCAGATTTGTGTTCTACTTCCACTTTCTGAGGGCTTTGGAGTGTACAGAGGAGAC
CCAAATGGATCAAACGCTCCATTTCAATCAGATTATAAGACCCATCTGGCAGCCGGTTATCGCCGCCGAGCAGCGGCATTCCATCGTCGGAGAGCTTTCGAAACCAATCA
AGCAACACAATCTGATCATCAGGACATGTAAGGTCCACTGCTCGCCGACCAGAGACCATCTCAAGAAGAACAATACCAAAGCTGAAAACATCGGATTTTGCAGTGGCAAT
GCTTCTTCTTTGAAAACTCTCCGGTGGGAGATACCCAATTGTGCCGCCAATTTTGGTGGTTTCCACCAGCCGGAACTGGTGGTGGCTCATCGACGGCACGCTGTTTTGGT
ACTCAAGATCATGCTCCAACCACCTTGCCAAACCAAAATCACCAAGCTTAGCGTTATAGAACAGAGCAGCAGCCAAGCCTCTCACAATCTTCACTCTCTGTTTCCAACTA
AGATCCGTCCCGCCGTTCTCCGGCCGCCGGAAAAGTACTCTGTCCAAGCTTCGGTTGGGCATATAATCATAAACAATGAACAATTGGTCTTCATGAACACACCAACCACG
GAGCCGGACAAGATTCCGGTGTCGGAGATGGGCAACCGCCACCAGCTCCGCCACAAACGTCTTCTCAAACTTCTCCCCTTTTTCAGCCAAACATTTCACAGCCGCCATAG
TTCCATCACTAGGCAAATATGCTCTGTAAACCTTCCCAAATCCACCACTACCAAGAATTTCCTCTGCACTGAATCCTTTGGTTCCAATATAGAGCTCTGCAAAGCTGAAG
ATTCTTGGGTTGTCGCCGCCGAGTTTCTCAGAAAGGTGTACCCCATCGGTGTCGTGAAACTCGGACGGTGGTGGGTTTCTGGGTCTGCCGCCGTAGCAACAAGAATTAAC
CCATTTCAGGTTATGGATTTTGTGAAGGGAATCTCGGAGTAA
Protein sequenceShow/hide protein sequence
MPDSPSFLLPIAVEDSRGGRFVFYFHFLRALECTEETQMDQTLHFNQIIRPIWQPVIAAEQRHSIVGELSKPIKQHNLIIRTCKVHCSPTRDHLKKNNTKAENIGFCSGN
ASSLKTLRWEIPNCAANFGGFHQPELVVAHRRHAVLVLKIMLQPPCQTKITKLSVIEQSSSQASHNLHSLFPTKIRPAVLRPPEKYSVQASVGHIIINNEQLVFMNTPTT
EPDKIPVSEMGNRHQLRHKRLLKLLPFFSQTFHSRHSSITRQICSVNLPKSTTTKNFLCTESFGSNIELCKAEDSWVVAAEFLRKVYPIGVVKLGRWWVSGSAAVATRIN
PFQVMDFVKGISE