CuGenDBv2

Gene ID	CmoCh17G001090
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	60S ribosomal protein L13a
Genome location	Cmo_Chr17:584660..586341
RNA-Seq Expression	CmoCh17G001090
Synteny	CmoCh17G001090
Gene Ontology terms	GO:0017148 - negative regulation of translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR005755 - Ribosomal protein L13, eukaryotic/archaeal IPR005822 - Ribosomal protein L13 IPR023563 - Ribosomal protein L13, conserved site IPR036899 - Ribosomal protein L13 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022959031.1 60S ribosomal protein L13a-4-like isoform X1 [Cucurbita moschata]

5.1e-110

100

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Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_022964267.1 60S ribosomal protein L13a-4 [Cucurbita moschata]

1.7e-108

98.54

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGP LEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_022999881.1 60S ribosomal protein L13a-4 [Cucurbita maxima]

3.7e-108

98.06

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLKAYEGVPPPYDKIK+MVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGP LEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_023006480.1 60S ribosomal protein L13a-4-like [Cucurbita maxima]

1.1e-109

99.51

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRK+RAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_023547438.1 60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo]

1.1e-109

99.51

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYE+KKQLNKLRIKAEKVAEEKLGPHLEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

TrEMBL top hits

e value

%identity

Alignment

A0A2P6PFL8 Putative ribosomal protein L13

3.0e-108

96.6

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLG+LSSEVGWNHYDTIKELE+KRKERAQ AYE+KKQLNKLR+KAEKVAEEKLGPHLE+
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A6J1H3R1 60S ribosomal protein L13a-4-like isoform X1

2.5e-110

100

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A6J1HHD3 60S ribosomal protein L13a-4

8.0e-109

98.54

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGP LEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A6J1KEC1 60S ribosomal protein L13a-4

1.8e-108

98.06

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLKAYEGVPPPYDKIK+MVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGP LEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A6J1L089 60S ribosomal protein L13a-4-like

5.6e-110

99.51

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRK+RAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

SwissProt top hits

e value

%identity

Alignment

O49885 60S ribosomal protein L13a

2.8e-95

83.01

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGI AKRVVVDARHHMLGRLASI+AKELLNGQKVV+VR EEICISGGLVRQKMKY+RFLRKRMNTKPSHGPIH  AP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
          ALARLK YEG+PPP+DK KR+V+PDALKVLRLQ GHKYCLLG+LSSEVGWN+YDTIKELE+KRKER+Q  YE+KKQLNKLR+KAE+VA+EKLG  L++
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Q9FKC0 60S ribosomal protein L13a-4

5.7e-104

89.81

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLK YEGVP PYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQLNKLR+KAEKVAEEKLG  L++
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Q9LRX8 60S ribosomal protein L13a-2

4.1e-102

89.32

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHM GRLASI+AKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLK +EGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YE+KKQL KLR KAEKVAEEKLG  L+V
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        +A IKY
Subjt:  IAPIKY

Q9SFU1 60S ribosomal protein L13a-1

1.8e-102

88.35

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLAS++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        A ALARLK +EGVP PYDKIKRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERAQA YE+KKQL+KLR KAEKVAEEKLG  L+V
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Q9SVR0 60S ribosomal protein L13a-3

4.1e-102

88.35

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVD RHHMLGRLAS  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLK +EG+PPPYDKIKRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q  YE+KKQLNKLR KAEKVAEE+LG  L+V
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Arabidopsis top hits

e value

%identity

Alignment

AT3G07110.1 Ribosomal protein L13 family protein

1.3e-103

88.35

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLAS++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        A ALARLK +EGVP PYDKIKRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERAQA YE+KKQL+KLR KAEKVAEEKLG  L+V
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

AT3G24830.1 Ribosomal protein L13 family protein

2.9e-103

89.32

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHM GRLASI+AKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLK +EGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YE+KKQL KLR KAEKVAEEKLG  L+V
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        +A IKY
Subjt:  IAPIKY

AT4G13170.1 Ribosomal protein L13 family protein

2.9e-103

88.35

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVD RHHMLGRLAS  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLK +EG+PPPYDKIKRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q  YE+KKQLNKLR KAEKVAEE+LG  L+V
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

AT5G48760.1 Ribosomal protein L13 family protein

4.1e-105

89.81

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Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLK YEGVP PYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQLNKLR+KAEKVAEEKLG  L++
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

AT5G48760.2 Ribosomal protein L13 family protein

4.1e-105

89.81

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Query:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV
        AAALARLK YEGVP PYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQLNKLR+KAEKVAEEKLG  L++
Subjt:  AAALARLKAYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Sequences

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CDS sequence

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ATGGTGTCCGGTTCCGGTATCTGCGCCAAGCGCGTCGTCGTTGACGCCAGGCATCACATGTTGGGAAGACTCGCTTCGATTCTGGCTAAAGAGCTTCTCAATGGACAGAA
AGTTGTGGTTGTTAGGTGCGAGGAGATCTGCATCTCCGGCGGATTGGTCCGCCAAAAGATGAAGTACATGCGGTTCTTGAGGAAGCGGATGAACACCAAACCTTCTCATG
GTCCAATTCACTTCCGTGCCCCCGCTAAGATCCTTTGGCGTACCATTCGTGGGATGATTCCCCATAAGACCAAGCGTGGAGCGGCGGCGCTTGCCCGTTTGAAGGCGTAC
GAGGGTGTTCCTCCTCCATACGATAAGATTAAGAGGATGGTCATCCCTGATGCTCTCAAGGTCTTGAGGCTTCAAGCCGGACATAAGTACTGTTTGTTGGGCAGACTCTC
GTCGGAGGTTGGATGGAACCACTATGATACCATCAAGGAACTTGAGAGGAAGAGAAAGGAGAGAGCTCAAGCTGCATATGAGAAAAAGAAGCAATTAAATAAGCTGAGGA
TTAAAGCAGAGAAGGTTGCTGAGGAGAAGCTTGGACCCCATCTTGAAGTTATTGCTCCCATCAAATACTAA

mRNA sequence

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AGCAACCCCAAGCATTTCCCTCGCAGAGAAGATTATAGCAACTCGAGGCTTTTGCACAGAGAGACGAGAAGATGGTGTCCGGTTCCGGTATCTGCGCCAAGCGCGTCGTC
GTTGACGCCAGGCATCACATGTTGGGAAGACTCGCTTCGATTCTGGCTAAAGAGCTTCTCAATGGACAGAAAGTTGTGGTTGTTAGGTGCGAGGAGATCTGCATCTCCGG
CGGATTGGTCCGCCAAAAGATGAAGTACATGCGGTTCTTGAGGAAGCGGATGAACACCAAACCTTCTCATGGTCCAATTCACTTCCGTGCCCCCGCTAAGATCCTTTGGC
GTACCATTCGTGGGATGATTCCCCATAAGACCAAGCGTGGAGCGGCGGCGCTTGCCCGTTTGAAGGCGTACGAGGGTGTTCCTCCTCCATACGATAAGATTAAGAGGATG
GTCATCCCTGATGCTCTCAAGGTCTTGAGGCTTCAAGCCGGACATAAGTACTGTTTGTTGGGCAGACTCTCGTCGGAGGTTGGATGGAACCACTATGATACCATCAAGGA
ACTTGAGAGGAAGAGAAAGGAGAGAGCTCAAGCTGCATATGAGAAAAAGAAGCAATTAAATAAGCTGAGGATTAAAGCAGAGAAGGTTGCTGAGGAGAAGCTTGGACCCC
ATCTTGAAGTTATTGCTCCCATCAAATACTAATTGGTAATTTTGATCTCAGAAGCAAGGATATTAGAGAATTGAGTTGCTGTTGAATTGCCCTTTTTCAATTTTGACAAC
ATATATCTTTGTTTGTAGACATGATGATACGTCTCTGTATGCTTCTACAATTCTTCTCTTTAGTCAAGTTTTCGATACATTTTGTTATATTCAGTTGATTTACGATACCC
GTTTGCTCCAAGCCAAGCATGTACTTTATGCTATACCACTGCTTTCGTTTATATCAAGTAGGACGGATCAATCTGAAGTTCATAATACTTGCAATACGTGTTTTACCGTA
TCGTGCTAAGTGTCTTGGTAATGCTTGTTTAAGGTGTATTGCTCGTTGCTGCATGCTAGACCCTTGTATACATTGTTTGGCCAATGGCAACATGAATTTGAATTGACCTA
CTCTGGTTGTGAGAGTCATCGTAG

Protein sequence

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MVSGSGICAKRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAY
EGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLNKLRIKAEKVAEEKLGPHLEVIAPIKY

CmoCh17G001090 (gene) of Cucurbita moschata (Rifu) v1 genome