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CmoCh17G001140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G001140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCLAVATA3/ESR-related protein
Genome locationCmo_Chr17:610022..614073
RNA-Seq ExpressionCmoCh17G001140
SyntenyCmoCh17G001140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574868.1 CLAVATA3/ESR (CLE)-related protein TDIF, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3695.45Show/hide
Query:  MAKFEDHYFSTSLTTSTKSQACFFLFLLILLLLFVPYRFSTSPSSMASTSNPSRPPSSKAMVEQAFPRPQFEASMHEVPSGPNPTSNK
        MAKFED+YFSTSLTTSTKSQACFFLFLL+LLLL VPYRFSTSPSSMASTSNPSRPPSSKAM EQAFPRPQFEASMHEVPSGPNPTSNK
Subjt:  MAKFEDHYFSTSLTTSTKSQACFFLFLLILLLLFVPYRFSTSPSSMASTSNPSRPPSSKAMVEQAFPRPQFEASMHEVPSGPNPTSNK

KAG6593788.1 hypothetical protein SDJN03_13264, partial [Cucurbita argyrosperma subsp. sororia]5.9e-1867.01Show/hide
Query:  MAKFEDHYFSTSLTTSTKSQACFFLFLLILLLLFVPYRFSTSPSSMASTSNPSRPPSSK-AMVEQAFPRP--------QFEASMHEVPSGPNPTSNK
        MA+ ++HYFSTSL TSTKS+ACFFLFLL+L     PY FST PSS AS S PSRPPSS  AM EQAF  P        QFEA+MHEVPSGPNPT+NK
Subjt:  MAKFEDHYFSTSLTTSTKSQACFFLFLLILLLLFVPYRFSTSPSSMASTSNPSRPPSSK-AMVEQAFPRP--------QFEASMHEVPSGPNPTSNK

KGN61461.1 hypothetical protein Csa_006135 [Cucumis sativus]1.7e-0961.97Show/hide
Query:  KSQACFFLFLLILLLLFVPYRFSTSPSSMASTSNPSRPPSSKAMVEQAFPRPQFEASMHEVPSGPNPTSNK
        KSQACFFLFLL+LLLL VP+R ST P++      PSRPPS+   +        FEA+MHEVPSGPNPTSNK
Subjt:  KSQACFFLFLLILLLLFVPYRFSTSPSSMASTSNPSRPPSSKAMVEQAFPRPQFEASMHEVPSGPNPTSNK

TrEMBL top hitse value%identityAlignment
A0A0A0LNB8 CLAVATA3/ESR-related protein8.3e-1061.97Show/hide
Query:  KSQACFFLFLLILLLLFVPYRFSTSPSSMASTSNPSRPPSSKAMVEQAFPRPQFEASMHEVPSGPNPTSNK
        KSQACFFLFLL+LLLL VP+R ST P++      PSRPPS+   +        FEA+MHEVPSGPNPTSNK
Subjt:  KSQACFFLFLLILLLLFVPYRFSTSPSSMASTSNPSRPPSSKAMVEQAFPRPQFEASMHEVPSGPNPTSNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTAGAGTTCATCCTCTCCCTTCTTATAAACCACATCTTACCCTCACAATCACTTCCAGCCCTTATTTCTCTTCTTCTTCTTCCTCGAACCCTTTCATGG
ATATTGACCTCTCGCTCGGCTTCTGGGGGGTGTCGTCGTTGCCGATCATCATTGTCGCCATCGTCATCATCGTATTTTCGCTCCCTTTTCATGGCAAAATTTGAA
GATCATTATTTCTCGACATCCTTAACTACTTCAACCAAGTCTCAAGCTTGCTTCTTCCTCTTCCTCCTTATTCTTCTCCTCCTCTTCGTTCCTTATCGATTCTCG
ACTTCGCCGAGCTCCATGGCTTCAACGAGTAATCCGTCCCGTCCTCCTTCGTCTAAGGCCATGGTAGAACAAGCCTTTCCTAGACCACAGTTTGAAGCATCTATG
CATGAAGTTCCTAGTGGCCCAAATCCCACATCCAACAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTAGAGTTCATCCTCTCCCTTCTTATAAACCACATCTTACCCTCACAATCACTTCCAGCCCTTATTTCTCTTCTTCTTCTTCCTCGAACCCTTTCATGG
ATATTGACCTCTCGCTCGGCTTCTGGGGGGTGTCGTCGTTGCCGATCATCATTGTCGCCATCGTCATCATCGTATTTTCGCTCCCTTTTCATGGCAAAATTTGAA
GATCATTATTTCTCGACATCCTTAACTACTTCAACCAAGTCTCAAGCTTGCTTCTTCCTCTTCCTCCTTATTCTTCTCCTCCTCTTCGTTCCTTATCGATTCTCG
ACTTCGCCGAGCTCCATGGCTTCAACGAGTAATCCGTCCCGTCCTCCTTCGTCTAAGGCCATGGTAGAACAAGCCTTTCCTAGACCACAGTTTGAAGCATCTATG
CATGAAGTTCCTAGTGGCCCAAATCCCACATCCAACAAGTAA
Protein sequenceShow/hide protein sequence
MFLEFILSLLINHILPSQSLPALISLLLLPRTLSWILTSRSASGGCRRCRSSLSPSSSSYFRSLFMAKFEDHYFSTSLTTSTKSQACFFLFLLILLLLFVPYRFS
TSPSSMASTSNPSRPPSSKAMVEQAFPRPQFEASMHEVPSGPNPTSNK