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CmoCh17G002370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G002370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChloride channel protein
Genome locationCmo_Chr17:1406565..1407693
RNA-Seq ExpressionCmoCh17G002370
SyntenyCmoCh17G002370
Gene Ontology termsGO:0006810 - transport (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8527578.1 hypothetical protein F0562_034707 [Nyssa sinensis]6.4e-0752.27Show/hide
Query:  LVVLSDGARSRGIAIGEKKNAAVEGGVRFGGIARRGGAVSFGRRRRRSGGSENERPDHGEAWGEMERKQLAFVEELIGGTERGGGLMR
        LV   DGA SRG+AIGE+   A EG V   G+A  GG V  GR     GG      DHG+  GEMER++LA VEELIG  E GGG  R
Subjt:  LVVLSDGARSRGIAIGEKKNAAVEGGVRFGGIARRGGAVSFGRRRRRSGGSENERPDHGEAWGEMERKQLAFVEELIGGTERGGGLMR
KAF7837267.1 putative membrane-associated kinase regulator 1 [Senna tora]1.2e-0842.54Show/hide
Query:  DTALDPLSFPELLPENSMFDGLSSLLDLSILH--HIGTESRSALVVLSDGARSRGIAIGEKKNAAVEGGVRFGGIARRGGAVSF---GRRRRRSGGSENE
        DT+L PLS     P +S     S+   ++ +H    G      LVVL DGA SR + +GE+     EGGV  GG A   G VS+   G     +GG E E
Subjt:  DTALDPLSFPELLPENSMFDGLSSLLDLSILH--HIGTESRSALVVLSDGARSRGIAIGEKKNAAVEGGVRFGGIARRGGAVSF---GRRRRRSGGSENE

Query:  RPDHGEAWGEMERKQLAFVEELIGGTERGGGLMR
          +HG+A  E+ER++LA VEELIGG E GGG  R
Subjt:  RPDHGEAWGEMERKQLAFVEELIGGTERGGGLMR
TrEMBL top hitse value%identityAlignment
A0A5J5ABW2 Chloride channel protein3.1e-0752.27Show/hide
Query:  LVVLSDGARSRGIAIGEKKNAAVEGGVRFGGIARRGGAVSFGRRRRRSGGSENERPDHGEAWGEMERKQLAFVEELIGGTERGGGLMR
        LV   DGA SRG+AIGE+   A EG V   G+A  GG V  GR     GG      DHG+  GEMER++LA VEELIG  E GGG  R
Subjt:  LVVLSDGARSRGIAIGEKKNAAVEGGVRFGGIARRGGAVSFGRRRRRSGGSENERPDHGEAWGEMERKQLAFVEELIGGTERGGGLMR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGAGTGGCTCGGCGATGACCTAATCGATGACGGACAACTCGAGGCTATGGTTCTTATTCTCGGATATCTCAAATTACCGGAAAATGAGTGCGATACTGCTCTTGA
TCCGCTTTCATTCCCGGAGTTGCTGCCTGAAAATTCAATGTTTGATGGTTTGTCCTCTTTACTAGATCTATCTATTCTTCACCATATTGGAACCGAATCGCGCTCTGCAC
TCGTCGTCCTCAGTGACGGAGCTAGGTCTAGAGGAATCGCAATCGGCGAAAAGAAGAATGCCGCTGTTGAAGGAGGAGTGAGATTCGGTGGAATCGCGCGACGCGGTGGT
GCTGTTAGTTTCGGAAGACGACGACGACGTTCTGGAGGAAGCGAGAATGAGCGTCCTGACCATGGAGAGGCGTGGGGAGAGATGGAGAGGAAGCAACTGGCCTTTGTAGA
AGAGCTCATCGGCGGGACAGAGCGCGGTGGAGGCTTGATGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGAGTGGCTCGGCGATGACCTAATCGATGACGGACAACTCGAGGCTATGGTTCTTATTCTCGGATATCTCAAATTACCGGAAAATGAGTGCGATACTGCTCTTGA
TCCGCTTTCATTCCCGGAGTTGCTGCCTGAAAATTCAATGTTTGATGGTTTGTCCTCTTTACTAGATCTATCTATTCTTCACCATATTGGAACCGAATCGCGCTCTGCAC
TCGTCGTCCTCAGTGACGGAGCTAGGTCTAGAGGAATCGCAATCGGCGAAAAGAAGAATGCCGCTGTTGAAGGAGGAGTGAGATTCGGTGGAATCGCGCGACGCGGTGGT
GCTGTTAGTTTCGGAAGACGACGACGACGTTCTGGAGGAAGCGAGAATGAGCGTCCTGACCATGGAGAGGCGTGGGGAGAGATGGAGAGGAAGCAACTGGCCTTTGTAGA
AGAGCTCATCGGCGGGACAGAGCGCGGTGGAGGCTTGATGAGGTGAAACAGAGATAGTGAATTCGAAATTGGATGATGAAGAGGAAGAGATAGAATGCGACGGCGATGAA
GGTAACGTTTGCGATCTCGAACTTTTCGTCGTTCGTTTCCCCATCGTCTCTGCTACACGTACACACACTCAGAAAGTGGTGAACAGAAGAGTAGTAGCGCAACGTGTGAG
ATCAGTGAGTGAGTGACACGCGCCGCCGTGAAAATGATTAGTCGCCTTCATGGGGGTTGGGAATTGCTCAAAACAGTTGTCAGTGGTCAATGGTGGGATTGGAGAGTCAC
GTGGGGAAAACTGGTTAGGGTCCACTTGTTGTATCCTACCTGGAGTGTCTAGTATTTACAAGGAATGTTTTATTTCATTATCCAAAC
Protein sequenceShow/hide protein sequence
MPEWLGDDLIDDGQLEAMVLILGYLKLPENECDTALDPLSFPELLPENSMFDGLSSLLDLSILHHIGTESRSALVVLSDGARSRGIAIGEKKNAAVEGGVRFGGIARRGG
AVSFGRRRRRSGGSENERPDHGEAWGEMERKQLAFVEELIGGTERGGGLMR