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CmoCh17G002400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G002400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMalectin_like domain-containing protein
Genome locationCmo_Chr17:1417975..1420441
RNA-Seq ExpressionCmoCh17G002400
SyntenyCmoCh17G002400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061707.1 putative leucine-rich repeat receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa]6.6e-0734.04Show/hide
Query:  NVTNRTVSASSIWNLDPSKLFETE----------------------------------------------------------------------------
        NVTNRTVSAS IWNL PSK+FETE                                                                            
Subjt:  NVTNRTVSASSIWNLDPSKLFETE----------------------------------------------------------------------------

Query:  ----PVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSL
             + PSPQS+LGPLI+GG+ FHVVPL ARTLVRDV +L
Subjt:  ----PVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSL

KAG6574998.1 hypothetical protein SDJN03_25637, partial [Cucurbita argyrosperma subsp. sororia]6.2e-05100Show/hide
Query:  SWNVTNRTVSASSIWNLDPSKLFETE
        SWNVTNRTVSASSIWNLDPSKLFETE
Subjt:  SWNVTNRTVSASSIWNLDPSKLFETE

XP_004140259.2 putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Cucumis sativus]8.6e-0733.33Show/hide
Query:  NVTNRTVSASSIWNLDPSKLFETE----------------------------------------------------------------------------
        NVTNRTVSAS IWNL PSK+FETE                                                                            
Subjt:  NVTNRTVSASSIWNLDPSKLFETE----------------------------------------------------------------------------

Query:  ----PVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSL
             + PSPQS+LGPLI+GG+ FH+VPL ARTLVRDV +L
Subjt:  ----PVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSL

XP_008449566.2 PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Cucumis melo]6.6e-0734.04Show/hide
Query:  NVTNRTVSASSIWNLDPSKLFETE----------------------------------------------------------------------------
        NVTNRTVSAS IWNL PSK+FETE                                                                            
Subjt:  NVTNRTVSASSIWNLDPSKLFETE----------------------------------------------------------------------------

Query:  ----PVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSL
             + PSPQS+LGPLI+GG+ FHVVPL ARTLVRDV +L
Subjt:  ----PVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSL

XP_038876012.1 putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Benincasa hispida]7.8e-0833.57Show/hide
Query:  SWNVTNRTVSASSIWNLDPSKLFETE--------------------------------------------------------------------------
        +WNVTNRTVSAS IWNL PSK+FETE                                                                          
Subjt:  SWNVTNRTVSASSIWNLDPSKLFETE--------------------------------------------------------------------------

Query:  ------PVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSL
               + PSPQS+LGPLI+GG+ FHVVPL  RTLVRDV +L
Subjt:  ------PVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSL

TrEMBL top hitse value%identityAlignment
A0A0A0KI45 Malectin_like domain-containing protein4.2e-0733.33Show/hide
Query:  NVTNRTVSASSIWNLDPSKLFETE----------------------------------------------------------------------------
        NVTNRTVSAS IWNL PSK+FETE                                                                            
Subjt:  NVTNRTVSASSIWNLDPSKLFETE----------------------------------------------------------------------------

Query:  ----PVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSL
             + PSPQS+LGPLI+GG+ FH+VPL ARTLVRDV +L
Subjt:  ----PVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSL

A0A1S3BN88 putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g144403.2e-0734.04Show/hide
Query:  NVTNRTVSASSIWNLDPSKLFETE----------------------------------------------------------------------------
        NVTNRTVSAS IWNL PSK+FETE                                                                            
Subjt:  NVTNRTVSASSIWNLDPSKLFETE----------------------------------------------------------------------------

Query:  ----PVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSL
             + PSPQS+LGPLI+GG+ FHVVPL ARTLVRDV +L
Subjt:  ----PVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSL

A0A5A7V488 Putative leucine-rich repeat receptor-like serine/threonine-protein kinase3.2e-0734.04Show/hide
Query:  NVTNRTVSASSIWNLDPSKLFETE----------------------------------------------------------------------------
        NVTNRTVSAS IWNL PSK+FETE                                                                            
Subjt:  NVTNRTVSASSIWNLDPSKLFETE----------------------------------------------------------------------------

Query:  ----PVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSL
             + PSPQS+LGPLI+GG+ FHVVPL ARTLVRDV +L
Subjt:  ----PVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGGAACGTAACCAATAGAACTGTATCTGCCTCTAGTATATGGAATCTCGACCCGTCTAAGCTATTTGAAACAGAGCCGGTGGCTCCCTCTCCCCAGTCAAGACT
TGGCCCATTGATCCATGGTGGAAAACCTTTTCATGTTGTGCCCCTTGCAGCAAGAACTCTTGTAAGAGATGTTCATAGCTTGTTCTTGATTTTAGTGAAAGAGGAGATCA
ACTTGAACTTAATCATTATCGCTGGGCAGGAATTACATGTTCTGAAGGCTCTTGAATTCGTGTGGTTACTTTAA
mRNA sequenceShow/hide mRNA sequence
CTTCCCCAACTCCGGCATCAGACTCCGCCGCCGTCCTTATTCCTTTCTTGCACGACGATTTCTCCTTCGGCCATGGCCTATTTCCTCCTTCTCATTCCCTCAGAGGTGCG
CCATTTTTAACCTTTATCTCTGCTCTCTTCTTCTCCCTGGTCTTACTTTCCTACTCTGTTTTCAACTTTTTCATCGATTATTGACTTCCCTGCTCCGACGAAACTCGACG
GCCACATCTGGAAACCTGACGACGAAAGTGAAATCAACAGGAACATCACTGACTCTGTTCTTGATCCTACGCTTTCCACTGTCCGCTCCTTTCCTAGGGCTATTAATTGG
AAATTTTTCTATGTTGTGGGACCTGTCTTTCGTACCGGAAAGTATAGGGTTTGAATGACGTATTACTACGGCGGAGTTAATGGCCTTGATTCGCCGCCGGTTTTCGATCA
GATTGTTGGTAGGACTGTTTGGAGCGTGGTGAGTACTTCTGGGGACTTTGGCAGGGGATTGCGTCGTATTACGAGGGTGTTTTTGAGGCCAAGGGGAAATCCATGAGTGT
GTGCATCGGCTCCAATACGTATACGGATCCCGACCCCCTTTTACTTCTGCCTTGGAGGTTGTGTTGTTGGGGGATTCTCTTTATAATATGAGTTGGAACGTAACCAATAG
AACTGTATCTGCCTCTAGTATATGGAATCTCGACCCGTCTAAGCTATTTGAAACAGAGCCGGTGGCTCCCTCTCCCCAGTCAAGACTTGGCCCATTGATCCATGGTGGAA
AACCTTTTCATGTTGTGCCCCTTGCAGCAAGAACTCTTGTAAGAGATGTTCATAGCTTGTTCTTGATTTTAGTGAAAGAGGAGATCAACTTGAACTTAATCATTATCGCT
GGGCAGGAATTACATGTTCTGAAGGCTCTTGAATTCGTGTGGTTACTTTAAACCTTTTGAGTATGGACCTTTCAGGATCCTTATCACGTAGCAGTTCTTGACAGAGTATG
CTCCCTGAATATAGTGTTTGACATTTATTTATCAATTTTGTTTCTGGATTCATCTGCTATCTCACTTGGCAGTTCTTGACAGGCATTTGGAAGATAATAACTTCAGTGTG
GTGAGATTTCATTGTCACTTGGAACTTTGCCTTGCTTGAGGGAAC
Protein sequenceShow/hide protein sequence
MSWNVTNRTVSASSIWNLDPSKLFETEPVAPSPQSRLGPLIHGGKPFHVVPLAARTLVRDVHSLFLILVKEEINLNLIIIAGQELHVLKALEFVWLL