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CmoCh17G002810 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G002810
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLow-density receptor-like protein
Genome locationCmo_Chr17:1690698..1691970
RNA-Seq ExpressionCmoCh17G002810
SyntenyCmoCh17G002810
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575035.1 hypothetical protein SDJN03_25674, partial [Cucurbita argyrosperma subsp. sororia]5.6e-43100Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQVL
        MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQVL
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQVL
XP_011656652.1 uncharacterized protein LOC101217077 isoform X2 [Cucumis sativus]4.9e-3992.47Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQ
        MASSTA+ITFRV+MVVILLLV+FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV +GNDGK +GSGAIRRLLHQ
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQ
XP_011656653.1 uncharacterized protein LOC101217077 isoform X3 [Cucumis sativus]2.9e-3991.49Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQV
        MASSTA+ITFRV+MVVILLLV+FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV +GNDGK +GSGAIRRLLHQ+
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQV
XP_022959154.1 uncharacterized protein LOC111460229 [Cucurbita moschata]4.7e-4298.94Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQV
        MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQ+
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQV
XP_031742567.1 uncharacterized protein LOC101217077 isoform X1 [Cucumis sativus]4.9e-3992.47Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQ
        MASSTA+ITFRV+MVVILLLV+FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV +GNDGK +GSGAIRRLLHQ
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQ
TrEMBL top hitse value%identityAlignment
A0A0A0KBE9 Uncharacterized protein1.6e-4092.63Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQVL
        MASSTA+ITFRV+MVVILLLV+FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV +GNDGK +GSGAIRRLLHQVL
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQVL
A0A1S3C7I8 uncharacterized protein LOC103497900 isoform X21.2e-3890.43Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQV
        MASSTA+ITFRV+MVVILLLV+FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV++GNDGK +GS AIRRLLHQ+
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQV
A0A1S3C994 uncharacterized protein LOC103497900 isoform X15.3e-3991.49Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQV
        MASSTA+ITFRV+MVVILLLV+FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV++GNDGK +GS AIRRLLHQV
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQV
A0A6J1H763 uncharacterized protein LOC1114602292.3e-4298.94Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQV
        MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQ+
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQV
A0A6J1L4G6 uncharacterized protein LOC1114990612.3e-4298.94Show/hide
Query:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQV
        MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQ+
Subjt:  MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18850.1 unknown protein6.4e-2968.89Show/hide
Query:  ASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLL
        +S T RI FR V+++ L++V+FYVGRPLYWKISAT+HDIR NKQ+V+EG+SQIV EAQ+SVGWYHDESDSG REG++ K SG    RRLL
Subjt:  ASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGTCGACGGCTAGGATTACGTTTCGCGTTGTCATGGTGGTGATCCTCCTCCTCGTCGTTTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCAACTGT
ACATGATATTCGCCAGAACAAACAGACCGTCAAAGAAGGTCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAATCGGACTCTGGCGTCC
GTGAAGGAAATGATGGAAAGAATTCCGGATCGGGTGCTATTCGGAGGCTGCTTCATCAGGTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
TTCTTTTTGCCTGATCTAACCATTTCAACTCCCTCGTGGGAATCTCTGAGCTCTGATAGATCATAGTCTCTGCTTCTCTGTTTCTCTCCACAAGATATAACCATCGGAAA
CAATGGCGTCGTCGACGGCTAGGATTACGTTTCGCGTTGTCATGGTGGTGATCCTCCTCCTCGTCGTTTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCAACT
GTACATGATATTCGCCAGAACAAACAGACCGTCAAAGAAGGTCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAATCGGACTCTGGCGT
CCGTGAAGGAAATGATGGAAAGAATTCCGGATCGGGTGCTATTCGGAGGCTGCTTCATCAGGTTTTGTGAAAATCTCAGTTATTTGAATTGTGATTAGTTCGGGATAATT
GAATGGTTTCATATGCATTAGTGAAGTTCAATAAGCGGATCTGATTTTTTTTTTTTTTCTCGTAATAACGTAATAACGTGTTAATTAGCACCTACTGAGTCGATTTAGTT
AAAGAAGGCTAAGAAAGGCTAAGAAAGGAAAAGAAATCGTAATGCTTCAACGTTCAGCCTTTAATGTTTCCATTATGCACTGTTAGTCACTCGGATATGTGGATAGTGAT
ATTCGTACCTGAGACATGGTGAACTACTGCTTACGAAAGACTCGTTCTGACAAGAAATTAGATAGTGTTAGTTTATAATGAGCGAAGTTGGCTGATATTGTGAATGAGAA
ATTTTAGTTTAAGACTGAATATTAGGTAGAGGTGGAAATGTGTACATAGGATGATAAGAACTAAAGATAGCAGTAGTCTTTTGTGATGGTTTGTGTGCAAATTTGGCATT
CTGGTGCTGAAGGAGCAATTTCAAACAAAATCAACTAATTGAAGTATAACGGAGAAGGCTTCAATAAGAAAATTGTAGAAAACGATCGATACCTTTGAACTTGTCTAGAT
AGAACTACGACTTGGTGGATCTGTAGTTGACCATGAAAACAAAGCCATAATGCCCTACTGTCTTGGTAATCATATTTCTTTGCTCTTTATTTATTTATTTTTTTTTTAAT
TTTTTATTCATAAGCTCAAATGCGGAAAATATCATAAATCTCACTTGGCAATAAGTTACTGTCCATGTGCAAAAATAATCTGTC
Protein sequenceShow/hide protein sequence
MASSTARITFRVVMVVILLLVVFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVREGNDGKNSGSGAIRRLLHQVL