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CmoCh17G002830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G002830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like
Genome locationCmo_Chr17:1708862..1709536
RNA-Seq ExpressionCmoCh17G002830
SyntenyCmoCh17G002830
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR016680 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593937.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B, partial [Cucurbita argyrosperma subsp. sororia]5.9e-2698.41Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCL+KGQQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

KAG7026281.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2596.83Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        MA+AVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCL+KGQQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

XP_022138355.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Momordica charantia]2.5e-2493.65Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        MASAVDAAG+PIPTSAVLMSS+KHIANMCRSENVAYLQCK+KD NPEKCLDKGQQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

XP_022930219.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata]5.9e-2698.41Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCL+KGQQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

XP_022958837.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata]2.0e-26100Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

TrEMBL top hitse value%identityAlignment
A0A6J1C988 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B1.2e-2493.65Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        MASAVDAAG+PIPTSAVLMSS+KHIANMCRSENVAYLQCK+KD NPEKCLDKGQQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

A0A6J1EWD6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like2.8e-2698.41Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCL+KGQQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

A0A6J1H2X4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like9.8e-27100Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

A0A6J1KIR7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like2.8e-2698.41Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCL+KGQQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

A0A6J1KXR2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like9.8e-27100Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

SwissProt top hitse value%identityAlignment
Q8LGE7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B8.5e-2071.43Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        M+SAVDA G+PIPTSAVL +S+KHI   C  ENVA+L+CK+ DPNPEKCLDKG+ VTRCVL L
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

Q9SQT4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A1.8e-1765.57Show/hide
Query:  SAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        +AVD  G+PIPTSAVL +S+KHI   C  EN+A+L+CK+ DPNPEKCL+KG+ VTRCVL L
Subjt:  SAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

Arabidopsis top hitse value%identityAlignment
AT3G06310.1 Cox19-like CHCH family protein1.3e-1865.57Show/hide
Query:  SAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        +AVD  G+PIPTSAVL +S+KHI   C  EN+A+L+CK+ DPNPEKCL+KG+ VTRCVL L
Subjt:  SAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

AT3G06310.2 Cox19-like CHCH family protein2.0e-1966.13Show/hide
Query:  SAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSLY
        +AVD  G+PIPTSAVL +S+KHI   C  EN+A+L+CK+ DPNPEKCL+KG+ VTRCVL LY
Subjt:  SAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSLY

AT3G06310.3 Cox19-like CHCH family protein1.3e-1865.57Show/hide
Query:  SAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        +AVD  G+PIPTSAVL +S+KHI   C  EN+A+L+CK+ DPNPEKCL+KG+ VTRCVL L
Subjt:  SAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

AT5G18800.1 Cox19-like CHCH family protein6.1e-2171.43Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        M+SAVDA G+PIPTSAVL +S+KHI   C  ENVA+L+CK+ DPNPEKCLDKG+ VTRCVL L
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL

AT5G18800.2 Cox19-like CHCH family protein6.1e-2171.43Show/hide
Query:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL
        M+SAVDA G+PIPTSAVL +S+KHI   C  ENVA+L+CK+ DPNPEKCLDKG+ VTRCVL L
Subjt:  MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCGCAGTAGATGCTGCTGGAGATCCAATTCCTACATCGGCGGTGCTAATGTCCTCGTCAAAGCACATTGCGAACATGTGTCGATCGGAGAATGTGGCATACCT
CCAGTGCAAAAGGAAGGATCCGAACCCGGAGAAATGCCTCGACAAAGGCCAACAAGTCACTCGCTGCGTCCTCTCTCTTTATCATATGATCGTCTTCTGA
mRNA sequenceShow/hide mRNA sequence
TCCCGTGTAAGTTAGCATTTCTAACCCTAATACTCTGCTATCTCCTTACTCGGTCTGATCTGCATTTCTCTCAGATTCTCACTCTTAGTTTACGGAACCCGACTCAGTGG
ATTGAAAGGAATTGATCGAATTAGAGATGGCGAGCGCAGTAGATGCTGCTGGAGATCCAATTCCTACATCGGCGGTGCTAATGTCCTCGTCAAAGCACATTGCGAACATG
TGTCGATCGGAGAATGTGGCATACCTCCAGTGCAAAAGGAAGGATCCGAACCCGGAGAAATGCCTCGACAAAGGCCAACAAGTCACTCGCTGCGTCCTCTCTCTTTATCA
TATGATCGTCTTCTGA
Protein sequenceShow/hide protein sequence
MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCVLSLYHMIVF