; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G002870 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G002870
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr17:1734169..1734573
RNA-Seq ExpressionCmoCh17G002870
SyntenyCmoCh17G002870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033453.1 hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa]1.7e-2960.84Show/hide
Query:  MDQMNNASSLFLWEDTADSEVDRSLSHPHQLESAV--DDPEDARSCSC---DDYATDRSAVDLQDDGDG---DEDRAVGSTGDDARSSHLDETRPSGATL
        MDQ+ +ASS FLWED+ADSEVD+ LSHPH+LESAV  DD EDA SCSC   D    D  A+D QDDGD    D D+ +   GD  R       R SGA L
Subjt:  MDQMNNASSLFLWEDTADSEVDRSLSHPHQLESAV--DDPEDARSCSC---DDYATDRSAVDLQDDGDG---DEDRAVGSTGDDARSSHLDETRPSGATL

Query:  EYS-SEEDEEEEEESNNNVGAIRDMNEMEDKLFWDTCMEGGYP
        +Y   EE+EEEEEES+++VG IR+MNEMEDKLFWDTCM GGYP
Subjt:  EYS-SEEDEEEEEESNNNVGAIRDMNEMEDKLFWDTCMEGGYP

KAE8076890.1 hypothetical protein FH972_015512 [Carpinus fangiana]1.2e-0638.51Show/hide
Query:  NASSLFLWEDTADSEVDRSLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGDGDEDRAVGSTGDDARSSHLDETRP---------SGATLEYSS
        + SS  L+ED ADSE D +    H++ +  DD +DA SCSCDD   D       +  D DE  +  S G DA   H    RP           A    SS
Subjt:  NASSLFLWEDTADSEVDRSLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGDGDEDRAVGSTGDDARSSHLDETRP---------SGATLEYSS

Query:  EEDEEEEEESNNNVGAIR----------DMNEMEDKLFWDTCMEGGYP
        EE E EEE    N+G I           + +EMED LFW+TCM  GYP
Subjt:  EEDEEEEEESNNNVGAIR----------DMNEMEDKLFWDTCMEGGYP

KAE8646684.1 hypothetical protein Csa_005604 [Cucumis sativus]2.2e-2161.9Show/hide
Query:  TADSEVDRSLSH-PHQLESAV---DDPEDARSCSCDDYATDRSAVDLQD--DGD-GDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEEEESNN
        +ADSEVD+ LSH PHQLESAV   DD EDA SCSC++   D S  D QD  DGD GD D+ +G  GD  R       R SGA   Y  EE+EEEEE SNN
Subjt:  TADSEVDRSLSH-PHQLESAV---DDPEDARSCSCDDYATDRSAVDLQD--DGD-GDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEEEESNN

Query:  NVGAIRDMNEMEDKLFWDTCMEGGYP
        +VGAIR+MNEMEDK+FWDTCM GGYP
Subjt:  NVGAIRDMNEMEDKLFWDTCMEGGYP

KAG2727271.1 hypothetical protein I3760_01G150500 [Carya illinoinensis]2.9e-0538.52Show/hide
Query:  LWEDTADSEVDRSLS--HPHQLESAV----DDPEDARSCSCD---DY---ATDRSAVDLQDDGDGDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEED
        L EDTADS    ++     H  E A+    DD +DA SCSCD   DY      +  VD  DD D D     G+ GDD R    D      +T + + E +
Subjt:  LWEDTADSEVDRSLS--HPHQLESAV----DDPEDARSCSCD---DY---ATDRSAVDLQDDGDGDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEED

Query:  EEEEEESNNNVGAIRDMNEMEDKLFWDTCMEGGYP
          + EE    +G   +M+EMED+LFW+TCM  GYP
Subjt:  EEEEEESNNNVGAIRDMNEMEDKLFWDTCMEGGYP

KAG6575041.1 hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sororia]3.6e-6499.24Show/hide
Query:  MNNASSLFLWEDTADSEVDRSLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGDGDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEE
        MNNASSLFLWEDTADSEVDR LSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGDGDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEE
Subjt:  MNNASSLFLWEDTADSEVDRSLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGDGDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEE

Query:  EESNNNVGAIRDMNEMEDKLFWDTCMEGGYP
        EESNNNVGAIRDMNEMEDKLFWDTCMEGGYP
Subjt:  EESNNNVGAIRDMNEMEDKLFWDTCMEGGYP

TrEMBL top hitse value%identityAlignment
A0A0A0KBF3 Uncharacterized protein1.2e-2863.12Show/hide
Query:  MDQMNNASSLFLWEDTADSEVDRSLSH-PHQLESAV---DDPEDARSCSCDDYATDRSAVDLQD--DGD-GDEDRAVGSTGDDARSSHLDETRPSGATLE
        MDQ+ +ASS FLWED+ADSEVD+ LSH PHQLESAV   DD EDA SCSC++   D S  D QD  DGD GD D+ +G  GD  R       R SGA   
Subjt:  MDQMNNASSLFLWEDTADSEVDRSLSH-PHQLESAV---DDPEDARSCSCDDYATDRSAVDLQD--DGD-GDEDRAVGSTGDDARSSHLDETRPSGATLE

Query:  YSSEEDEEEEEESNNNVGAIRDMNEMEDKLFWDTCMEGGYP
        Y  EE+EEEEE SNN+VGAIR+MNEMEDK+FWDTCM GGYP
Subjt:  YSSEEDEEEEEESNNNVGAIRDMNEMEDKLFWDTCMEGGYP

A0A2H5N748 Uncharacterized protein3.2e-0538.03Show/hide
Query:  NASSLFLWEDTADSEVDRSLSHPHQLESAV---DDPEDARSCSCDDYATDRSAVDLQDDG-DGDEDRAVGSTGDDARSSHLDETRP----SGATLEYSSE
        + SS  L E++ADSEVD SL+    L  AV    D +DA SCSCD        +++Q +G D D D     + DD   S  D+ R         + ++  
Subjt:  NASSLFLWEDTADSEVDRSLSHPHQLESAV---DDPEDARSCSCDDYATDRSAVDLQDDG-DGDEDRAVGSTGDDARSSHLDETRP----SGATLEYSSE

Query:  EDEEEEEES-----NNNVGAIRDMNEMEDKLFWDTCMEGGYP
         D+EEE  S     NNN+   +  +EMED+LFW+TCM  GYP
Subjt:  EDEEEEEES-----NNNVGAIRDMNEMEDKLFWDTCMEGGYP

A0A2N9EJU4 Uncharacterized protein2.2e-0636.84Show/hide
Query:  NASSLFLWEDTADSEVDRSLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGDGDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEED----EE
        + SS  L+EDTADSE D  + H   + + + D +DA SCSCD    D+         D D+  +  S+G +       E   SG    + S+E+      
Subjt:  NASSLFLWEDTADSEVDRSLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGDGDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEED----EE

Query:  EEEESNNNVGAIRDMNEMEDKLFWDTCMEGGYP
        +E E    V  I D++EMED+LFW+TCME GYP
Subjt:  EEEESNNNVGAIRDMNEMEDKLFWDTCMEGGYP

A0A5A7SSL9 Uncharacterized protein8.2e-3060.84Show/hide
Query:  MDQMNNASSLFLWEDTADSEVDRSLSHPHQLESAV--DDPEDARSCSC---DDYATDRSAVDLQDDGDG---DEDRAVGSTGDDARSSHLDETRPSGATL
        MDQ+ +ASS FLWED+ADSEVD+ LSHPH+LESAV  DD EDA SCSC   D    D  A+D QDDGD    D D+ +   GD  R       R SGA L
Subjt:  MDQMNNASSLFLWEDTADSEVDRSLSHPHQLESAV--DDPEDARSCSC---DDYATDRSAVDLQDDGDG---DEDRAVGSTGDDARSSHLDETRPSGATL

Query:  EYS-SEEDEEEEEESNNNVGAIRDMNEMEDKLFWDTCMEGGYP
        +Y   EE+EEEEEES+++VG IR+MNEMEDKLFWDTCM GGYP
Subjt:  EYS-SEEDEEEEEESNNNVGAIRDMNEMEDKLFWDTCMEGGYP

A0A5N6RGD2 Uncharacterized protein5.7e-0738.51Show/hide
Query:  NASSLFLWEDTADSEVDRSLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGDGDEDRAVGSTGDDARSSHLDETRP---------SGATLEYSS
        + SS  L+ED ADSE D +    H++ +  DD +DA SCSCDD   D       +  D DE  +  S G DA   H    RP           A    SS
Subjt:  NASSLFLWEDTADSEVDRSLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGDGDEDRAVGSTGDDARSSHLDETRP---------SGATLEYSS

Query:  EEDEEEEEESNNNVGAIR----------DMNEMEDKLFWDTCMEGGYP
        EE E EEE    N+G I           + +EMED LFW+TCM  GYP
Subjt:  EEDEEEEEESNNNVGAIR----------DMNEMEDKLFWDTCMEGGYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCAAATGAACAATGCTTCTTCTTTATTCCTCTGGGAAGACACAGCAGATTCTGAGGTGGATAGATCATTGTCTCATCCTCATCAACTCGAATCTGCTGTGGACGA
TCCGGAGGACGCTCGATCCTGCAGCTGCGATGATTATGCTACTGATCGGAGCGCCGTTGATCTCCAAGATGATGGGGATGGTGATGAAGATCGAGCTGTTGGTTCGACCG
GTGACGACGCTCGATCAAGCCATCTCGATGAAACACGACCAAGCGGGGCAACGTTGGAGTATAGTTCTGAGGAGGACGAGGAAGAAGAAGAAGAGTCGAATAATAATGTG
GGTGCGATCCGAGATATGAACGAAATGGAAGATAAGCTCTTTTGGGATACGTGCATGGAGGGAGGGTATCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCAAATGAACAATGCTTCTTCTTTATTCCTCTGGGAAGACACAGCAGATTCTGAGGTGGATAGATCATTGTCTCATCCTCATCAACTCGAATCTGCTGTGGACGA
TCCGGAGGACGCTCGATCCTGCAGCTGCGATGATTATGCTACTGATCGGAGCGCCGTTGATCTCCAAGATGATGGGGATGGTGATGAAGATCGAGCTGTTGGTTCGACCG
GTGACGACGCTCGATCAAGCCATCTCGATGAAACACGACCAAGCGGGGCAACGTTGGAGTATAGTTCTGAGGAGGACGAGGAAGAAGAAGAAGAGTCGAATAATAATGTG
GGTGCGATCCGAGATATGAACGAAATGGAAGATAAGCTCTTTTGGGATACGTGCATGGAGGGAGGGTATCCGTGA
Protein sequenceShow/hide protein sequence
MDQMNNASSLFLWEDTADSEVDRSLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGDGDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEEEESNNNV
GAIRDMNEMEDKLFWDTCMEGGYP